RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
CALD1-205ENST00000422748 HRCP23327 699 aa22.49■■□□□ 1.19
CALD1-205ENST00000422748 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
CALD1-205ENST00000422748 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
CALD1-205ENST00000422748 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
CALD1-205ENST00000422748 PCGF6Q9BYE7 350 aa21.89■■□□□ 1.09
CALD1-205ENST00000422748 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
CALD1-205ENST00000422748 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
CALD1-205ENST00000422748 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
CALD1-205ENST00000422748 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
CALD1-205ENST00000422748 SLC24A1O60721 1099 aa21.46■■□□□ 1.03
CALD1-205ENST00000422748 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
CALD1-205ENST00000422748 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
CALD1-205ENST00000422748 DCAF1Q9Y4B6 1507 aa21.28■■□□□ 1
CALD1-205ENST00000422748 MYT1Q01538 1121 aa21.25■□□□□ 0.99
CALD1-205ENST00000422748 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
CALD1-205ENST00000422748 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
CALD1-205ENST00000422748 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
CALD1-205ENST00000422748 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
CALD1-205ENST00000422748 ABCC9O60706 1549 aa20.81■□□□□ 0.92
CALD1-205ENST00000422748 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
CALD1-205ENST00000422748 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
CALD1-205ENST00000422748 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
CALD1-205ENST00000422748 NACADO15069 1562 aa20.61■□□□□ 0.89
CALD1-205ENST00000422748 TTBK1Q5TCY1 1321 aaPredicted RBP20.5■□□□□ 0.87
CALD1-205ENST00000422748 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
CALD1-205ENST00000422748 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
CALD1-205ENST00000422748 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
CALD1-205ENST00000422748 PRKCSHP14314 528 aaPredicted RBP20.35■□□□□ 0.85
CALD1-205ENST00000422748 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
CALD1-205ENST00000422748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
CALD1-205ENST00000422748 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
CALD1-205ENST00000422748 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
CALD1-205ENST00000422748 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
CALD1-205ENST00000422748 APLP2Q06481 763 aa20.03■□□□□ 0.8
CALD1-205ENST00000422748 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
CALD1-205ENST00000422748 TRIM41Q8WV44 630 aa20■□□□□ 0.79
CALD1-205ENST00000422748 DAXXQ9UER7 740 aaPredicted RBP19.99■□□□□ 0.79
CALD1-205ENST00000422748 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
CALD1-205ENST00000422748 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
CALD1-205ENST00000422748 ERICH6Q7L0X2 663 aa19.93■□□□□ 0.78
CALD1-205ENST00000422748 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
CALD1-205ENST00000422748 BCL11AQ9H165 835 aa19.9■□□□□ 0.78
CALD1-205ENST00000422748 ZNF316A6NFI3 1004 aaPredicted RBP19.85■□□□□ 0.77
CALD1-205ENST00000422748 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
CALD1-205ENST00000422748 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
CALD1-205ENST00000422748 MIER1Q8N108 512 aa19.78■□□□□ 0.76
CALD1-205ENST00000422748 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
CALD1-205ENST00000422748 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
CALD1-205ENST00000422748 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
CALD1-205ENST00000422748 WIZO95785 1651 aa19.66■□□□□ 0.74
CALD1-205ENST00000422748 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
CALD1-205ENST00000422748 SUPT16HQ9Y5B9 1047 aaKnown RBP19.6■□□□□ 0.73
CALD1-205ENST00000422748 TSHZ2Q9NRE2 1034 aa19.6■□□□□ 0.73
CALD1-205ENST00000422748 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
CALD1-205ENST00000422748 CLSPNQ9HAW4 1339 aa19.52■□□□□ 0.72
CALD1-205ENST00000422748 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
CALD1-205ENST00000422748 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
CALD1-205ENST00000422748 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
CALD1-205ENST00000422748 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
CALD1-205ENST00000422748 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
CALD1-205ENST00000422748 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
CALD1-205ENST00000422748 EIF4G1Q04637 1599 aaKnown RBP19.26■□□□□ 0.67
CALD1-205ENST00000422748 CEP162Q5TB80 1403 aa19.26■□□□□ 0.67
CALD1-205ENST00000422748 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
CALD1-205ENST00000422748 BCANQ96GW7 911 aa19.15■□□□□ 0.66
CALD1-205ENST00000422748 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
CALD1-205ENST00000422748 RBM19Q9Y4C8 960 aaKnown RBP19.1■□□□□ 0.65
CALD1-205ENST00000422748 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
CALD1-205ENST00000422748 NCAPD3P42695 1498 aa19.06■□□□□ 0.64
CALD1-205ENST00000422748 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
CALD1-205ENST00000422748 FKBP8Q14318 412 aa19.02■□□□□ 0.64
CALD1-205ENST00000422748 MSH5O43196 834 aa18.98■□□□□ 0.63
CALD1-205ENST00000422748 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
CALD1-205ENST00000422748 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
CALD1-205ENST00000422748 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
CALD1-205ENST00000422748 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
CALD1-205ENST00000422748 SOGA1O94964 1423 aa18.93■□□□□ 0.62
CALD1-205ENST00000422748 EIF5BO60841 1220 aaKnown RBP18.92■□□□□ 0.62
CALD1-205ENST00000422748 ITGAEP38570 1179 aa18.86■□□□□ 0.61
CALD1-205ENST00000422748 DHX57Q6P158 1386 aaKnown RBP18.85■□□□□ 0.61
CALD1-205ENST00000422748 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
CALD1-205ENST00000422748 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.61
CALD1-205ENST00000422748 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
CALD1-205ENST00000422748 NEFLP07196 543 aa18.82■□□□□ 0.6
CALD1-205ENST00000422748 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
CALD1-205ENST00000422748 EEA1Q15075 1411 aa18.79■□□□□ 0.6
CALD1-205ENST00000422748 FANCIQ9NVI1 1328 aa18.76■□□□□ 0.59
CALD1-205ENST00000422748 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
CALD1-205ENST00000422748 CFTRP13569 1480 aa18.71■□□□□ 0.58
CALD1-205ENST00000422748 DEKP35659 375 aaKnown RBP18.7■□□□□ 0.58
CALD1-205ENST00000422748 CLIP1P30622 1438 aa18.7■□□□□ 0.58
CALD1-205ENST00000422748 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
CALD1-205ENST00000422748 RTN4Q9NQC3 1192 aaKnown RBP18.69■□□□□ 0.58
CALD1-205ENST00000422748 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
CALD1-205ENST00000422748 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
CALD1-205ENST00000422748 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
CALD1-205ENST00000422748 DDX10Q13206 875 aaKnown RBP18.59■□□□□ 0.57
CALD1-205ENST00000422748 TOP2BQ02880 1626 aa18.59■□□□□ 0.57
CALD1-205ENST00000422748 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms