RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ATMINO43313 823 aaPredicted RBP15.64■□□□□ 0.09
SFXN1-202ENST00000421887 SLC39A7Q92504 469 aa15.61■□□□□ 0.09
SFXN1-202ENST00000421887 C7P10643 843 aa15.59■□□□□ 0.09
SFXN1-202ENST00000421887 PROM2Q8N271 834 aa15.59■□□□□ 0.09
SFXN1-202ENST00000421887 POTEMA6NI47 508 aa15.57■□□□□ 0.08
SFXN1-202ENST00000421887 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
SFXN1-202ENST00000421887 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
SFXN1-202ENST00000421887 MIER1Q8N108 512 aa15.52■□□□□ 0.08
SFXN1-202ENST00000421887 ATN1P54259 1190 aaPredicted RBP15.51■□□□□ 0.07
SFXN1-202ENST00000421887 POTEGQ6S5H5 508 aa15.51■□□□□ 0.07
SFXN1-202ENST00000421887 POTEJP0CG39 1038 aa15.5■□□□□ 0.07
SFXN1-202ENST00000421887 KIF12Q96FN5 646 aa15.5■□□□□ 0.07
SFXN1-202ENST00000421887 MAMSTRQ6ZN01 415 aa15.46■□□□□ 0.07
SFXN1-202ENST00000421887 TRPC6Q9Y210 931 aa15.43■□□□□ 0.06
SFXN1-202ENST00000421887 MAP3K13O43283 966 aa15.42■□□□□ 0.06
SFXN1-202ENST00000421887 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
SFXN1-202ENST00000421887 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
SFXN1-202ENST00000421887 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
SFXN1-202ENST00000421887 FAM163AQ96GL9 167 aaPredicted RBP15.36■□□□□ 0.05
SFXN1-202ENST00000421887 PLCD3Q8N3E9 789 aa15.35■□□□□ 0.05
SFXN1-202ENST00000421887 TIE1P35590 1138 aa15.34■□□□□ 0.05
SFXN1-202ENST00000421887 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
SFXN1-202ENST00000421887 SEC24BO95487 1268 aa15.29■□□□□ 0.04
SFXN1-202ENST00000421887 TTLL13PA6NNM8 815 aa15.27■□□□□ 0.04
SFXN1-202ENST00000421887 PCDH10Q9P2E7 1040 aa15.26■□□□□ 0.03
SFXN1-202ENST00000421887 COLQQ9Y215 455 aaPredicted RBP15.24■□□□□ 0.03
SFXN1-202ENST00000421887 PCDHB13Q9Y5F0 798 aa15.24■□□□□ 0.03
SFXN1-202ENST00000421887 LCE2DQ5TA82 110 aaPredicted RBP15.23■□□□□ 0.03
SFXN1-202ENST00000421887 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
SFXN1-202ENST00000421887 TRIM35Q9UPQ4 493 aa15.2■□□□□ 0.02
SFXN1-202ENST00000421887 SGIP1Q9BQI5 828 aa15.16■□□□□ 0.02
SFXN1-202ENST00000421887 NUBP1P53384 320 aa15.15■□□□□ 0.02
SFXN1-202ENST00000421887 IER5LQ5T953 404 aa15.11■□□□□ 0.01
SFXN1-202ENST00000421887 IFNL1Q8IU54 200 aa15.11■□□□□ 0.01
SFXN1-202ENST00000421887 FAM212AQ96EL1 285 aa15.11■□□□□ 0.01
SFXN1-202ENST00000421887 TMEM106CQ9BVX2 250 aa15.08■□□□□ 0
SFXN1-202ENST00000421887 FKBP8Q14318 412 aa15.04■□□□□ -0
SFXN1-202ENST00000421887 SLAIN1Q8ND83 568 aa15.03■□□□□ -0
SFXN1-202ENST00000421887 PLCG2P16885 1265 aa15.01□□□□□ -0.01
SFXN1-202ENST00000421887 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
SFXN1-202ENST00000421887 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.01
SFXN1-202ENST00000421887 PYGBP11216 843 aa14.95□□□□□ -0.02
SFXN1-202ENST00000421887 ST18O60284 1047 aa14.91□□□□□ -0.02
SFXN1-202ENST00000421887 IRX5P78411 483 aaPredicted RBP14.91□□□□□ -0.02
SFXN1-202ENST00000421887 OCEL1Q9H607 264 aa14.86□□□□□ -0.03
SFXN1-202ENST00000421887 PCDHB8Q9UN66 801 aa14.86□□□□□ -0.03
SFXN1-202ENST00000421887 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
SFXN1-202ENST00000421887 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.78□□□□□ -0.04
SFXN1-202ENST00000421887 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
SFXN1-202ENST00000421887 SNPHO15079 494 aa14.72□□□□□ -0.05
SFXN1-202ENST00000421887 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
SFXN1-202ENST00000421887 GSE1Q14687 1217 aa14.68□□□□□ -0.06
SFXN1-202ENST00000421887 MARVELD3Q96A59 401 aa14.68□□□□□ -0.06
SFXN1-202ENST00000421887 TMEM121BQ9BXQ6 578 aaPredicted RBP14.68□□□□□ -0.06
SFXN1-202ENST00000421887 MKRN3Q13064 507 aaKnown RBP14.67□□□□□ -0.06
SFXN1-202ENST00000421887 ZNF467Q7Z7K2 595 aaPredicted RBP14.67□□□□□ -0.06
SFXN1-202ENST00000421887 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
SFXN1-202ENST00000421887 PDCD7Q8N8D1 485 aaKnown RBP14.63□□□□□ -0.07
SFXN1-202ENST00000421887 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
SFXN1-202ENST00000421887 L3MBTL3Q96JM7 780 aaPredicted RBP14.6□□□□□ -0.07
SFXN1-202ENST00000421887 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
SFXN1-202ENST00000421887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.58□□□□□ -0.08
SFXN1-202ENST00000421887 PSEN1P49768 467 aa14.57□□□□□ -0.08
SFXN1-202ENST00000421887 MMRN1Q13201 1228 aa14.57□□□□□ -0.08
SFXN1-202ENST00000421887 CHRM1P11229 460 aaPredicted RBP14.53□□□□□ -0.08
SFXN1-202ENST00000421887 EMP3P54852 163 aa14.52□□□□□ -0.09
SFXN1-202ENST00000421887 PDAP1Q13442 181 aaKnown RBP14.45□□□□□ -0.1
SFXN1-202ENST00000421887 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
SFXN1-202ENST00000421887 FAM205CA6NFA0 338 aa14.44□□□□□ -0.1
SFXN1-202ENST00000421887 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
SFXN1-202ENST00000421887 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
SFXN1-202ENST00000421887 G3V3G9 751 aa14.42□□□□□ -0.1
SFXN1-202ENST00000421887 HS3ST6Q96QI5 342 aa14.41□□□□□ -0.1
SFXN1-202ENST00000421887 SPOCK2Q92563 424 aa14.38□□□□□ -0.11
SFXN1-202ENST00000421887 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
SFXN1-202ENST00000421887 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
SFXN1-202ENST00000421887 ILDR1Q86SU0 546 aaPredicted RBP14.36□□□□□ -0.11
SFXN1-202ENST00000421887 BOLA1Q9Y3E2 137 aa14.35□□□□□ -0.11
SFXN1-202ENST00000421887 IFNLR1Q8IU57 520 aaPredicted RBP14.34□□□□□ -0.11
SFXN1-202ENST00000421887 KRTAP3-3Q9BYR6 98 aa14.34□□□□□ -0.11
SFXN1-202ENST00000421887 KRTAP3-2Q9BYR7 98 aa14.34□□□□□ -0.11
SFXN1-202ENST00000421887 ZNF710Q8N1W2 664 aa14.28□□□□□ -0.12
SFXN1-202ENST00000421887 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
SFXN1-202ENST00000421887 ERBB3P21860 1342 aa14.2□□□□□ -0.14
SFXN1-202ENST00000421887 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
SFXN1-202ENST00000421887 EFCAB3Q8N7B9 438 aa14.2□□□□□ -0.14
SFXN1-202ENST00000421887 HOXB1P14653 301 aaPredicted RBP14.19□□□□□ -0.14
SFXN1-202ENST00000421887 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
SFXN1-202ENST00000421887 VARS2Q5ST30 1063 aaKnown RBP14.09□□□□□ -0.15
SFXN1-202ENST00000421887 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
SFXN1-202ENST00000421887 MICALL2Q8IY33 904 aa14.07□□□□□ -0.16
SFXN1-202ENST00000421887 TMEM92Q6UXU6 159 aa14.04□□□□□ -0.16
SFXN1-202ENST00000421887 RNF166Q96A37 237 aaPredicted RBP14.02□□□□□ -0.17
SFXN1-202ENST00000421887 SOX12O15370 315 aa13.99□□□□□ -0.17
SFXN1-202ENST00000421887 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
SFXN1-202ENST00000421887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
SFXN1-202ENST00000421887 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
SFXN1-202ENST00000421887 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
SFXN1-202ENST00000421887 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
SFXN1-202ENST00000421887 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms