RNA–Protein interactions for RNA: ENST00000421750.1

TRAPPC2P4-201, Transcript of trafficking protein particle complex 2 pseudogene 4, humanhuman

BASIC

Gene TRAPPC2P4, Length 331 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2P4-201ENST00000421750 STAG3Q9UJ98 1225 aa8.3□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 ATMINO43313 823 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC2P4-201ENST00000421750 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC2P4-201ENST00000421750 SCUBE2Q9NQ36 999 aa8.23□□□□□ -1.09
TRAPPC2P4-201ENST00000421750 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRAPPC2P4-201ENST00000421750 MS4A3Q96HJ5 214 aa8.21□□□□□ -1.1
TRAPPC2P4-201ENST00000421750 MNX1P50219 401 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC2P4-201ENST00000421750 CDAN1Q8IWY9 1227 aa8.15□□□□□ -1.1
TRAPPC2P4-201ENST00000421750 POTEFA5A3E0 1075 aa8.13□□□□□ -1.11
TRAPPC2P4-201ENST00000421750 ATN1P54259 1190 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC2P4-201ENST00000421750 CCDC61Q9Y6R9 512 aa8.05□□□□□ -1.12
TRAPPC2P4-201ENST00000421750 BMP2KQ9NSY1 1161 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC2P4-201ENST00000421750 TIE1P35590 1138 aa8.03□□□□□ -1.12
TRAPPC2P4-201ENST00000421750 KIF12Q96FN5 646 aa8.03□□□□□ -1.12
TRAPPC2P4-201ENST00000421750 MMRN1Q13201 1228 aa8.02□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 SPDYE4A6NLX3 237 aa7.99□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 ST18O60284 1047 aa7.99□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 SPNS2Q8IVW8 549 aa7.98□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 TSPYL2Q9H2G4 693 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 IER5LQ5T953 404 aa7.97□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 TRPC6Q9Y210 931 aa7.97□□□□□ -1.13
TRAPPC2P4-201ENST00000421750 SEC24BO95487 1268 aa7.95□□□□□ -1.14
TRAPPC2P4-201ENST00000421750 EHMT2Q96KQ7 1210 aa7.95□□□□□ -1.14
TRAPPC2P4-201ENST00000421750 TTLL13PA6NNM8 815 aa7.93□□□□□ -1.14
TRAPPC2P4-201ENST00000421750 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC2P4-201ENST00000421750 MAP3K13O43283 966 aa7.92□□□□□ -1.14
TRAPPC2P4-201ENST00000421750 SLAIN1Q8ND83 568 aa7.92□□□□□ -1.14
TRAPPC2P4-201ENST00000421750 SGIP1Q9BQI5 828 aa7.87□□□□□ -1.15
TRAPPC2P4-201ENST00000421750 TRIM35Q9UPQ4 493 aa7.87□□□□□ -1.15
TRAPPC2P4-201ENST00000421750 SNPHO15079 494 aa7.82□□□□□ -1.16
TRAPPC2P4-201ENST00000421750 SLC24A1O60721 1099 aa7.8□□□□□ -1.16
TRAPPC2P4-201ENST00000421750 RASEFQ8IZ41 740 aa7.8□□□□□ -1.16
TRAPPC2P4-201ENST00000421750 PROM2Q8N271 834 aa7.8□□□□□ -1.16
TRAPPC2P4-201ENST00000421750 PLCG2P16885 1265 aa7.78□□□□□ -1.16
TRAPPC2P4-201ENST00000421750 IRX5P78411 483 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC2P4-201ENST00000421750 PCDHB13Q9Y5F0 798 aa7.76□□□□□ -1.17
TRAPPC2P4-201ENST00000421750 MARVELD3Q96A59 401 aa7.74□□□□□ -1.17
TRAPPC2P4-201ENST00000421750 PLEKHG5O94827 1062 aa7.73□□□□□ -1.17
TRAPPC2P4-201ENST00000421750 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
TRAPPC2P4-201ENST00000421750 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
TRAPPC2P4-201ENST00000421750 CSRNP3Q8WYN3 585 aa7.72□□□□□ -1.17
TRAPPC2P4-201ENST00000421750 IFNL1Q8IU54 200 aa7.71□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 TMEM106CQ9BVX2 250 aa7.71□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 OCEL1Q9H607 264 aa7.71□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.71□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 EMP3P54852 163 aa7.68□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 POTEB3A0JP26 581 aa7.66□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 POTEBQ6S5H4 581 aa7.66□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 MIER1Q8N108 512 aa7.66□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
TRAPPC2P4-201ENST00000421750 NUBP1P53384 320 aa7.62□□□□□ -1.19
TRAPPC2P4-201ENST00000421750 FAM205CA6NFA0 338 aa7.6□□□□□ -1.19
TRAPPC2P4-201ENST00000421750 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC2P4-201ENST00000421750 C3orf67Q6ZVT6 689 aa7.56□□□□□ -1.2
TRAPPC2P4-201ENST00000421750 PDCD7Q8N8D1 485 aaKnown RBP7.56□□□□□ -1.2
TRAPPC2P4-201ENST00000421750 FAM212AQ96EL1 285 aa7.56□□□□□ -1.2
TRAPPC2P4-201ENST00000421750 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC2P4-201ENST00000421750 RNF166Q96A37 237 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC2P4-201ENST00000421750 PLCD3Q8N3E9 789 aa7.52□□□□□ -1.21
TRAPPC2P4-201ENST00000421750 HOXB1P14653 301 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC2P4-201ENST00000421750 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 MYT1LQ9UL68 1186 aa7.46□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 ILDR1Q86SU0 546 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 PCDHB8Q9UN66 801 aa7.45□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 PYGBP11216 843 aa7.43□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 MKRN3Q13064 507 aaKnown RBP7.43□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 PTGER2P43116 358 aa7.42□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 GOLGA2Q08379 1002 aa7.41□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 ERBB3P21860 1342 aa7.41□□□□□ -1.22
TRAPPC2P4-201ENST00000421750 DCAF8Q5TAQ9 597 aa7.39□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 DOK7Q18PE1 504 aa7.38□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 ZNF467Q7Z7K2 595 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 ZNF710Q8N1W2 664 aa7.38□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 RTN4Q9NQC3 1192 aaKnown RBP7.36□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 VARS2Q5ST30 1063 aaKnown RBP7.34□□□□□ -1.23
TRAPPC2P4-201ENST00000421750 RIMBP2O15034 1052 aa7.33□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 BOLA1Q9Y3E2 137 aa7.33□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 DPY19L2Q6NUT2 758 aa7.32□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 ZSWIM6Q9HCJ5 1215 aa7.32□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 G3V3G9 751 aa7.3□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 CHRM1P11229 460 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 PSEN1P49768 467 aa7.3□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 AMER1Q5JTC6 1135 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC2P4-201ENST00000421750 GSE1Q14687 1217 aa7.27□□□□□ -1.25
TRAPPC2P4-201ENST00000421750 GPR153Q6NV75 609 aa7.25□□□□□ -1.25
TRAPPC2P4-201ENST00000421750 PDAP1Q13442 181 aaKnown RBP7.23□□□□□ -1.25
TRAPPC2P4-201ENST00000421750 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
TRAPPC2P4-201ENST00000421750 LSM11P83369 360 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRAPPC2P4-201ENST00000421750 ANKRD13DQ6ZTN6 518 aa7.2□□□□□ -1.26
TRAPPC2P4-201ENST00000421750 CABP2Q9NPB3 220 aa7.19□□□□□ -1.26
TRAPPC2P4-201ENST00000421750 HCSTQ9UBK5 93 aa7.18□□□□□ -1.26
TRAPPC2P4-201ENST00000421750 TMEM92Q6UXU6 159 aa7.16□□□□□ -1.26
TRAPPC2P4-201ENST00000421750 ZNF316A6NFI3 1004 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC2P4-201ENST00000421750 PBX2P40425 430 aa7.14□□□□□ -1.27
TRAPPC2P4-201ENST00000421750 MICALL2Q8IY33 904 aa7.12□□□□□ -1.27
TRAPPC2P4-201ENST00000421750 ARSIQ5FYB1 569 aa7.11□□□□□ -1.27
TRAPPC2P4-201ENST00000421750 RGS20O76081 388 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms