RNA–Protein interactions for RNA: ENST00000418110.5

PTPN12-204, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-204ENST00000418110 PROM2Q8N271 834 aa11.22□□□□□ -0.61
PTPN12-204ENST00000418110 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
PTPN12-204ENST00000418110 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
PTPN12-204ENST00000418110 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
PTPN12-204ENST00000418110 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
PTPN12-204ENST00000418110 C7P10643 843 aa11.16□□□□□ -0.62
PTPN12-204ENST00000418110 MIER1Q8N108 512 aa11.16□□□□□ -0.62
PTPN12-204ENST00000418110 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
PTPN12-204ENST00000418110 POTEMA6NI47 508 aa11.12□□□□□ -0.63
PTPN12-204ENST00000418110 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
PTPN12-204ENST00000418110 FKBP8Q14318 412 aa11.09□□□□□ -0.63
PTPN12-204ENST00000418110 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
PTPN12-204ENST00000418110 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
PTPN12-204ENST00000418110 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
PTPN12-204ENST00000418110 MAP3K13O43283 966 aa11.07□□□□□ -0.64
PTPN12-204ENST00000418110 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
PTPN12-204ENST00000418110 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
PTPN12-204ENST00000418110 POTEJP0CG39 1038 aa11.06□□□□□ -0.64
PTPN12-204ENST00000418110 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
PTPN12-204ENST00000418110 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
PTPN12-204ENST00000418110 TIE1P35590 1138 aa11.02□□□□□ -0.65
PTPN12-204ENST00000418110 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
PTPN12-204ENST00000418110 SEC24BO95487 1268 aa10.97□□□□□ -0.65
PTPN12-204ENST00000418110 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
PTPN12-204ENST00000418110 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
PTPN12-204ENST00000418110 PCDHB13Q9Y5F0 798 aa10.97□□□□□ -0.65
PTPN12-204ENST00000418110 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
PTPN12-204ENST00000418110 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
PTPN12-204ENST00000418110 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
PTPN12-204ENST00000418110 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
PTPN12-204ENST00000418110 NUBP1P53384 320 aa10.89□□□□□ -0.67
PTPN12-204ENST00000418110 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
PTPN12-204ENST00000418110 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
PTPN12-204ENST00000418110 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
PTPN12-204ENST00000418110 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
PTPN12-204ENST00000418110 IER5LQ5T953 404 aa10.85□□□□□ -0.67
PTPN12-204ENST00000418110 TMEM106CQ9BVX2 250 aa10.83□□□□□ -0.68
PTPN12-204ENST00000418110 PLCG2P16885 1265 aa10.79□□□□□ -0.68
PTPN12-204ENST00000418110 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
PTPN12-204ENST00000418110 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
PTPN12-204ENST00000418110 PYGBP11216 843 aa10.77□□□□□ -0.69
PTPN12-204ENST00000418110 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
PTPN12-204ENST00000418110 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
PTPN12-204ENST00000418110 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
PTPN12-204ENST00000418110 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
PTPN12-204ENST00000418110 ST18O60284 1047 aa10.67□□□□□ -0.7
PTPN12-204ENST00000418110 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
PTPN12-204ENST00000418110 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
PTPN12-204ENST00000418110 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
PTPN12-204ENST00000418110 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
PTPN12-204ENST00000418110 GSE1Q14687 1217 aa10.59□□□□□ -0.71
PTPN12-204ENST00000418110 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
PTPN12-204ENST00000418110 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
PTPN12-204ENST00000418110 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
PTPN12-204ENST00000418110 SNPHO15079 494 aa10.55□□□□□ -0.72
PTPN12-204ENST00000418110 C3orf67Q6ZVT6 689 aa10.55□□□□□ -0.72
PTPN12-204ENST00000418110 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
PTPN12-204ENST00000418110 TMEM121BQ9BXQ6 578 aaPredicted RBP10.52□□□□□ -0.73
PTPN12-204ENST00000418110 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
PTPN12-204ENST00000418110 PSEN1P49768 467 aa10.49□□□□□ -0.73
PTPN12-204ENST00000418110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.736e-8■■■■□ 23.5
PTPN12-204ENST00000418110 L3MBTL3Q96JM7 780 aaPredicted RBP10.48□□□□□ -0.73
PTPN12-204ENST00000418110 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
PTPN12-204ENST00000418110 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
PTPN12-204ENST00000418110 EMP3P54852 163 aa10.43□□□□□ -0.74
PTPN12-204ENST00000418110 IFNLR1Q8IU57 520 aaPredicted RBP10.43□□□□□ -0.74
PTPN12-204ENST00000418110 G3V3G9 751 aa10.41□□□□□ -0.74
PTPN12-204ENST00000418110 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
PTPN12-204ENST00000418110 PDAP1Q13442 181 aaKnown RBP10.41□□□□□ -0.74
PTPN12-204ENST00000418110 SPNS2Q8IVW8 549 aa10.41□□□□□ -0.74
PTPN12-204ENST00000418110 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
PTPN12-204ENST00000418110 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
PTPN12-204ENST00000418110 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
PTPN12-204ENST00000418110 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
PTPN12-204ENST00000418110 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
PTPN12-204ENST00000418110 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
PTPN12-204ENST00000418110 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
PTPN12-204ENST00000418110 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
PTPN12-204ENST00000418110 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
PTPN12-204ENST00000418110 POTEB3A0JP26 581 aa10.27□□□□□ -0.77
PTPN12-204ENST00000418110 POTEBQ6S5H4 581 aa10.27□□□□□ -0.77
PTPN12-204ENST00000418110 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
PTPN12-204ENST00000418110 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
PTPN12-204ENST00000418110 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
PTPN12-204ENST00000418110 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-204ENST00000418110 EFCAB3Q8N7B9 438 aa10.22□□□□□ -0.77
PTPN12-204ENST00000418110 DOK7Q18PE1 504 aa10.21□□□□□ -0.77
PTPN12-204ENST00000418110 ERBB3P21860 1342 aa10.19□□□□□ -0.78
PTPN12-204ENST00000418110 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
PTPN12-204ENST00000418110 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
PTPN12-204ENST00000418110 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-204ENST00000418110 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
PTPN12-204ENST00000418110 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
PTPN12-204ENST00000418110 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
PTPN12-204ENST00000418110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-204ENST00000418110 TMEM92Q6UXU6 159 aa10.08□□□□□ -0.8
PTPN12-204ENST00000418110 ZFP91Q96JP5 570 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-204ENST00000418110 SOX12O15370 315 aa10.07□□□□□ -0.8
PTPN12-204ENST00000418110 PKD2Q13563 968 aa10.07□□□□□ -0.8
PTPN12-204ENST00000418110 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms