RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-204ENST00000417762 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
SHPRH-204ENST00000417762 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
SHPRH-204ENST00000417762 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
SHPRH-204ENST00000417762 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
SHPRH-204ENST00000417762 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
SHPRH-204ENST00000417762 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
SHPRH-204ENST00000417762 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
SHPRH-204ENST00000417762 MIER1Q8N108 512 aa13.36□□□□□ -0.27
SHPRH-204ENST00000417762 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
SHPRH-204ENST00000417762 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
SHPRH-204ENST00000417762 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
SHPRH-204ENST00000417762 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
SHPRH-204ENST00000417762 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
SHPRH-204ENST00000417762 KIF12Q96FN5 646 aa13.27□□□□□ -0.29
SHPRH-204ENST00000417762 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
SHPRH-204ENST00000417762 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
SHPRH-204ENST00000417762 FKBP8Q14318 412 aa13.24□□□□□ -0.29
SHPRH-204ENST00000417762 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
SHPRH-204ENST00000417762 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
SHPRH-204ENST00000417762 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
SHPRH-204ENST00000417762 C7P10643 843 aa13.22□□□□□ -0.29
SHPRH-204ENST00000417762 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
SHPRH-204ENST00000417762 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
SHPRH-204ENST00000417762 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
SHPRH-204ENST00000417762 CECR2Q9BXF3 1484 aa13.18□□□□□ -0.3
SHPRH-204ENST00000417762 MAP3K13O43283 966 aa13.18□□□□□ -0.3
SHPRH-204ENST00000417762 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-204ENST00000417762 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-204ENST00000417762 NUBP1P53384 320 aa13.13□□□□□ -0.31
SHPRH-204ENST00000417762 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
SHPRH-204ENST00000417762 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
SHPRH-204ENST00000417762 TIE1P35590 1138 aa13.12□□□□□ -0.31
SHPRH-204ENST00000417762 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
SHPRH-204ENST00000417762 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
SHPRH-204ENST00000417762 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
SHPRH-204ENST00000417762 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-204ENST00000417762 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
SHPRH-204ENST00000417762 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
SHPRH-204ENST00000417762 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
SHPRH-204ENST00000417762 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
SHPRH-204ENST00000417762 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
SHPRH-204ENST00000417762 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
SHPRH-204ENST00000417762 WIZO95785 1651 aa12.99□□□□□ -0.33
SHPRH-204ENST00000417762 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
SHPRH-204ENST00000417762 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
SHPRH-204ENST00000417762 SCUBE2Q9NQ36 999 aa12.96□□□□□ -0.33
SHPRH-204ENST00000417762 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
SHPRH-204ENST00000417762 IER5LQ5T953 404 aa12.94□□□□□ -0.34
SHPRH-204ENST00000417762 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-204ENST00000417762 SEC24BO95487 1268 aa12.92□□□□□ -0.34
SHPRH-204ENST00000417762 POTEMA6NI47 508 aa12.9□□□□□ -0.34
SHPRH-204ENST00000417762 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
SHPRH-204ENST00000417762 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
SHPRH-204ENST00000417762 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
SHPRH-204ENST00000417762 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-204ENST00000417762 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
SHPRH-204ENST00000417762 PYGBP11216 843 aa12.84□□□□□ -0.35
SHPRH-204ENST00000417762 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
SHPRH-204ENST00000417762 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
SHPRH-204ENST00000417762 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
SHPRH-204ENST00000417762 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-204ENST00000417762 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
SHPRH-204ENST00000417762 PLCG2P16885 1265 aa12.77□□□□□ -0.37
SHPRH-204ENST00000417762 GSE1Q14687 1217 aa12.77□□□□□ -0.37
SHPRH-204ENST00000417762 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-204ENST00000417762 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
SHPRH-204ENST00000417762 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
SHPRH-204ENST00000417762 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
SHPRH-204ENST00000417762 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
SHPRH-204ENST00000417762 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
SHPRH-204ENST00000417762 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
SHPRH-204ENST00000417762 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-204ENST00000417762 OCEL1Q9H607 264 aa12.69□□□□□ -0.38
SHPRH-204ENST00000417762 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
SHPRH-204ENST00000417762 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-204ENST00000417762 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
SHPRH-204ENST00000417762 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
SHPRH-204ENST00000417762 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
SHPRH-204ENST00000417762 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
SHPRH-204ENST00000417762 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-204ENST00000417762 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
SHPRH-204ENST00000417762 PSEN1P49768 467 aa12.57□□□□□ -0.4
SHPRH-204ENST00000417762 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
SHPRH-204ENST00000417762 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
SHPRH-204ENST00000417762 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
SHPRH-204ENST00000417762 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
SHPRH-204ENST00000417762 ST18O60284 1047 aa12.53□□□□□ -0.4
SHPRH-204ENST00000417762 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-204ENST00000417762 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
SHPRH-204ENST00000417762 LOC105371045A0A1W2PR82 267 aa12.51□□□□□ -0.41
SHPRH-204ENST00000417762 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
SHPRH-204ENST00000417762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHPRH-204ENST00000417762 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
SHPRH-204ENST00000417762 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
SHPRH-204ENST00000417762 SNPHO15079 494 aa12.47□□□□□ -0.41
SHPRH-204ENST00000417762 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
SHPRH-204ENST00000417762 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.41
SHPRH-204ENST00000417762 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-204ENST00000417762 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms