RNA–Protein interactions for RNA: ENST00000417098.5

SATB2-202, Transcript of SATB homeobox 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SATB2, Length 5,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-202ENST00000417098 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
SATB2-202ENST00000417098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.14
SATB2-202ENST00000417098 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
SATB2-202ENST00000417098 TNIKQ9UKE5 1360 aa22.17■■□□□ 1.14
SATB2-202ENST00000417098 BECN1Q14457 450 aa22.14■■□□□ 1.13
SATB2-202ENST00000417098 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
SATB2-202ENST00000417098 PPP4R2Q9NY27 417 aa22.13■■□□□ 1.13
SATB2-202ENST00000417098 NOP58Q9Y2X3 529 aaKnown RBP22.08■■□□□ 1.13
SATB2-202ENST00000417098 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
SATB2-202ENST00000417098 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
SATB2-202ENST00000417098 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
SATB2-202ENST00000417098 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
SATB2-202ENST00000417098 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
SATB2-202ENST00000417098 TRIM44Q96DX7 344 aaPredicted RBP22.03■■□□□ 1.12
SATB2-202ENST00000417098 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
SATB2-202ENST00000417098 STAG3Q9UJ98 1225 aa22.03■■□□□ 1.12
SATB2-202ENST00000417098 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
SATB2-202ENST00000417098 RTN4Q9NQC3 1192 aaKnown RBP22.01■■□□□ 1.11
SATB2-202ENST00000417098 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
SATB2-202ENST00000417098 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
SATB2-202ENST00000417098 RBM19Q9Y4C8 960 aaKnown RBP21.94■■□□□ 1.1
SATB2-202ENST00000417098 GOLGA6L22H0YM25 854 aa21.91■■□□□ 1.1
SATB2-202ENST00000417098 ERICH6BQ5W0A0 696 aa21.91■■□□□ 1.1
SATB2-202ENST00000417098 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
SATB2-202ENST00000417098 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
SATB2-202ENST00000417098 DEKP35659 375 aaKnown RBP21.88■■□□□ 1.09
SATB2-202ENST00000417098 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
SATB2-202ENST00000417098 RGL3Q3MIN7 710 aa21.87■■□□□ 1.09
SATB2-202ENST00000417098 CCER2I3L3R5 266 aa21.85■■□□□ 1.09
SATB2-202ENST00000417098 NCLP19338 710 aaKnown RBP21.85■■□□□ 1.09
SATB2-202ENST00000417098 RGS3P49796 1198 aa21.85■■□□□ 1.09
SATB2-202ENST00000417098 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
SATB2-202ENST00000417098 KNSTRNQ9Y448 316 aa21.84■■□□□ 1.09
SATB2-202ENST00000417098 KIF27Q86VH2 1401 aa21.83■■□□□ 1.08
SATB2-202ENST00000417098 NAP1L5Q96NT1 182 aaPredicted RBP21.82■■□□□ 1.08
SATB2-202ENST00000417098 FTSJ3Q8IY81 847 aaKnown RBP21.77■■□□□ 1.08
SATB2-202ENST00000417098 TSHZ2Q9NRE2 1034 aa21.77■■□□□ 1.08
SATB2-202ENST00000417098 PTMAP06454 111 aaKnown RBP21.76■■□□□ 1.07
SATB2-202ENST00000417098 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
SATB2-202ENST00000417098 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
SATB2-202ENST00000417098 SOGA1O94964 1423 aa21.75■■□□□ 1.07
SATB2-202ENST00000417098 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
SATB2-202ENST00000417098 TIMELESSQ9UNS1 1208 aa21.73■■□□□ 1.07
SATB2-202ENST00000417098 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
SATB2-202ENST00000417098 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
SATB2-202ENST00000417098 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
SATB2-202ENST00000417098 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
SATB2-202ENST00000417098 FRAT1Q92837 279 aaPredicted RBP21.7■■□□□ 1.06
SATB2-202ENST00000417098 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
SATB2-202ENST00000417098 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
SATB2-202ENST00000417098 DNTTIP2Q5QJE6 756 aaKnown RBP21.69■■□□□ 1.06
SATB2-202ENST00000417098 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
SATB2-202ENST00000417098 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
SATB2-202ENST00000417098 TNNT2P45379 298 aaPredicted RBP21.68■■□□□ 1.06
SATB2-202ENST00000417098 CASC1Q6TDU7 716 aa21.68■■□□□ 1.06
SATB2-202ENST00000417098 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
SATB2-202ENST00000417098 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
SATB2-202ENST00000417098 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
SATB2-202ENST00000417098 TPRNQ4KMQ1 711 aa21.63■■□□□ 1.05
SATB2-202ENST00000417098 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
SATB2-202ENST00000417098 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
SATB2-202ENST00000417098 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
SATB2-202ENST00000417098 MAPK8IP3Q9UPT6 1336 aa21.59■■□□□ 1.05
SATB2-202ENST00000417098 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
SATB2-202ENST00000417098 L1TD1Q5T7N2 865 aaKnown RBP21.57■■□□□ 1.04
SATB2-202ENST00000417098 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
SATB2-202ENST00000417098 KANK4Q5T7N3 995 aaPredicted RBP21.57■■□□□ 1.04
SATB2-202ENST00000417098 NACADO15069 1562 aa21.56■■□□□ 1.04
SATB2-202ENST00000417098 HSCBQ8IWL3 235 aa21.54■■□□□ 1.04
SATB2-202ENST00000417098 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
SATB2-202ENST00000417098 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
SATB2-202ENST00000417098 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
SATB2-202ENST00000417098 MS4A1P11836 297 aa21.51■■□□□ 1.03
SATB2-202ENST00000417098 TMF1P82094 1093 aa21.51■■□□□ 1.03
SATB2-202ENST00000417098 SPRYD3Q8NCJ5 442 aa21.51■■□□□ 1.03
SATB2-202ENST00000417098 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
SATB2-202ENST00000417098 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
SATB2-202ENST00000417098 PLCB2Q00722 1185 aa21.5■■□□□ 1.03
SATB2-202ENST00000417098 ZRSR1Q15695 479 aaKnown RBP21.5■■□□□ 1.03
SATB2-202ENST00000417098 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
SATB2-202ENST00000417098 PPP1R15AO75807 674 aaPredicted RBP21.49■■□□□ 1.03
SATB2-202ENST00000417098 TCERG1O14776 1098 aaKnown RBP21.47■■□□□ 1.03
SATB2-202ENST00000417098 RCAN3Q9UKA8 241 aa21.47■■□□□ 1.03
SATB2-202ENST00000417098 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
SATB2-202ENST00000417098 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
SATB2-202ENST00000417098 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
SATB2-202ENST00000417098 CARMIL1Q5VZK9 1371 aa21.45■■□□□ 1.02
SATB2-202ENST00000417098 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
SATB2-202ENST00000417098 U2SURPO15042 1029 aaKnown RBP21.43■■□□□ 1.02
SATB2-202ENST00000417098 KTN1Q86UP2 1357 aaKnown RBP21.43■■□□□ 1.02
SATB2-202ENST00000417098 MSNP26038 577 aaKnown RBP21.43■■□□□ 1.02
SATB2-202ENST00000417098 FOXD1Q16676 465 aa21.42■■□□□ 1.02
SATB2-202ENST00000417098 CUX2O14529 1486 aa21.41■■□□□ 1.02
SATB2-202ENST00000417098 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
SATB2-202ENST00000417098 CDK11BP21127 795 aaKnown RBP21.39■■□□□ 1.01
SATB2-202ENST00000417098 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.39■■□□□ 1.01
SATB2-202ENST00000417098 SLKQ9H2G2 1235 aaPredicted RBP21.35■■□□□ 1.01
SATB2-202ENST00000417098 ARID4BQ4LE39 1312 aaPredicted RBP21.35■■□□□ 1.01
SATB2-202ENST00000417098 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
SATB2-202ENST00000417098 RALBP1Q15311 655 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms