RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
RBM39-209ENST00000416529 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
RBM39-209ENST00000416529 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
RBM39-209ENST00000416529 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
RBM39-209ENST00000416529 CFTRP13569 1480 aa13.49□□□□□ -0.25
RBM39-209ENST00000416529 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
RBM39-209ENST00000416529 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
RBM39-209ENST00000416529 HAX1O00165 279 aa13.4□□□□□ -0.26
RBM39-209ENST00000416529 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
RBM39-209ENST00000416529 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
RBM39-209ENST00000416529 NESP48681 1621 aa13.39□□□□□ -0.27
RBM39-209ENST00000416529 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
RBM39-209ENST00000416529 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
RBM39-209ENST00000416529 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
RBM39-209ENST00000416529 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
RBM39-209ENST00000416529 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
RBM39-209ENST00000416529 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
RBM39-209ENST00000416529 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
RBM39-209ENST00000416529 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
RBM39-209ENST00000416529 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.29
RBM39-209ENST00000416529 WDR62O43379 1518 aa13.2□□□□□ -0.3
RBM39-209ENST00000416529 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
RBM39-209ENST00000416529 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
RBM39-209ENST00000416529 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
RBM39-209ENST00000416529 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
RBM39-209ENST00000416529 WRNQ14191 1432 aaPredicted RBP eCLIP13.12□□□□□ -0.31
RBM39-209ENST00000416529 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
RBM39-209ENST00000416529 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
RBM39-209ENST00000416529 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
RBM39-209ENST00000416529 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
RBM39-209ENST00000416529 EVX2Q03828 476 aa13.07□□□□□ -0.32
RBM39-209ENST00000416529 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
RBM39-209ENST00000416529 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
RBM39-209ENST00000416529 CUX1P39880 1505 aa13.04□□□□□ -0.32
RBM39-209ENST00000416529 PROM2Q8N271 834 aa13.02□□□□□ -0.33
RBM39-209ENST00000416529 POLA1P09884 1462 aaPredicted RBP13.02□□□□□ -0.33
RBM39-209ENST00000416529 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
RBM39-209ENST00000416529 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
RBM39-209ENST00000416529 CLCN6P51797 869 aa13□□□□□ -0.33
RBM39-209ENST00000416529 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
RBM39-209ENST00000416529 SOGA1O94964 1423 aa12.98□□□□□ -0.33
RBM39-209ENST00000416529 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
RBM39-209ENST00000416529 TARBP1Q13395 1621 aaKnown RBP12.95□□□□□ -0.34
RBM39-209ENST00000416529 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
RBM39-209ENST00000416529 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
RBM39-209ENST00000416529 GABBR2O75899 941 aa12.91□□□□□ -0.34
RBM39-209ENST00000416529 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
RBM39-209ENST00000416529 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
RBM39-209ENST00000416529 EEA1Q15075 1411 aa12.88□□□□□ -0.35
RBM39-209ENST00000416529 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
RBM39-209ENST00000416529 RIMBP3CA6NJZ7 1639 aa12.86□□□□□ -0.35
RBM39-209ENST00000416529 RIMBP3BA6NNM3 1639 aa12.86□□□□□ -0.35
RBM39-209ENST00000416529 RIMBP3Q9UFD9 1639 aa12.86□□□□□ -0.35
RBM39-209ENST00000416529 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
RBM39-209ENST00000416529 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
RBM39-209ENST00000416529 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
RBM39-209ENST00000416529 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
RBM39-209ENST00000416529 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
RBM39-209ENST00000416529 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
RBM39-209ENST00000416529 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
RBM39-209ENST00000416529 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
RBM39-209ENST00000416529 EIF4G3O43432 1585 aaKnown RBP12.82□□□□□ -0.36
RBM39-209ENST00000416529 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
RBM39-209ENST00000416529 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
RBM39-209ENST00000416529 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.363e-11■■■■□ 23.7
RBM39-209ENST00000416529 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
RBM39-209ENST00000416529 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
RBM39-209ENST00000416529 FKBP8Q14318 412 aa12.77□□□□□ -0.37
RBM39-209ENST00000416529 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
RBM39-209ENST00000416529 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
RBM39-209ENST00000416529 CUL7Q14999 1698 aa12.76□□□□□ -0.37
RBM39-209ENST00000416529 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
RBM39-209ENST00000416529 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
RBM39-209ENST00000416529 IGF1RP08069 1367 aa12.74□□□□□ -0.37
RBM39-209ENST00000416529 MIER1Q8N108 512 aa12.73□□□□□ -0.37
RBM39-209ENST00000416529 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
RBM39-209ENST00000416529 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
RBM39-209ENST00000416529 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
RBM39-209ENST00000416529 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
RBM39-209ENST00000416529 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
RBM39-209ENST00000416529 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
RBM39-209ENST00000416529 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
RBM39-209ENST00000416529 PRXQ9BXM0 1461 aa12.65□□□□□ -0.38
RBM39-209ENST00000416529 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
RBM39-209ENST00000416529 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
RBM39-209ENST00000416529 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
RBM39-209ENST00000416529 NUP160Q12769 1436 aa12.62□□□□□ -0.39
RBM39-209ENST00000416529 ARAP1Q96P48 1450 aa12.61□□□□□ -0.39
RBM39-209ENST00000416529 CHD1O14646 1710 aa12.61□□□□□ -0.39
RBM39-209ENST00000416529 KIF21BO75037 1637 aa12.59□□□□□ -0.39
RBM39-209ENST00000416529 PHF12Q96QT6 1004 aa12.59□□□□□ -0.39
RBM39-209ENST00000416529 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
RBM39-209ENST00000416529 KIAA0586Q9BVV6 1533 aa12.58□□□□□ -0.4
RBM39-209ENST00000416529 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
RBM39-209ENST00000416529 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
RBM39-209ENST00000416529 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
RBM39-209ENST00000416529 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
RBM39-209ENST00000416529 LHX8Q68G74 356 aa12.53□□□□□ -0.4
RBM39-209ENST00000416529 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
RBM39-209ENST00000416529 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms