RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 PROM2Q8N271 834 aa12.92□□□□□ -0.34
XIST-201ENST00000416330 MIER1Q8N108 512 aa12.91□□□□□ -0.34
XIST-201ENST00000416330 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
XIST-201ENST00000416330 ASTLQ6HA08 431 aaPredicted RBP12.9□□□□□ -0.34
XIST-201ENST00000416330 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
XIST-201ENST00000416330 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
XIST-201ENST00000416330 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
XIST-201ENST00000416330 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
XIST-201ENST00000416330 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
XIST-201ENST00000416330 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
XIST-201ENST00000416330 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
XIST-201ENST00000416330 POTEMA6NI47 508 aa12.77□□□□□ -0.37
XIST-201ENST00000416330 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
XIST-201ENST00000416330 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
XIST-201ENST00000416330 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
XIST-201ENST00000416330 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
XIST-201ENST00000416330 MAP3K13O43283 966 aa12.72□□□□□ -0.37
XIST-201ENST00000416330 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
XIST-201ENST00000416330 TIE1P35590 1138 aa12.7□□□□□ -0.38
XIST-201ENST00000416330 SEC24BO95487 1268 aa12.69□□□□□ -0.38
XIST-201ENST00000416330 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
XIST-201ENST00000416330 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
XIST-201ENST00000416330 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
XIST-201ENST00000416330 FKBP8Q14318 412 aa12.64□□□□□ -0.39
XIST-201ENST00000416330 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
XIST-201ENST00000416330 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
XIST-201ENST00000416330 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
XIST-201ENST00000416330 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
XIST-201ENST00000416330 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
XIST-201ENST00000416330 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
XIST-201ENST00000416330 IER5LQ5T953 404 aa12.55□□□□□ -0.4
XIST-201ENST00000416330 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
XIST-201ENST00000416330 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
XIST-201ENST00000416330 NUBP1P53384 320 aa12.52□□□□□ -0.41
XIST-201ENST00000416330 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
XIST-201ENST00000416330 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
XIST-201ENST00000416330 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
XIST-201ENST00000416330 PLCG2P16885 1265 aa12.46□□□□□ -0.41
XIST-201ENST00000416330 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
XIST-201ENST00000416330 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
XIST-201ENST00000416330 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
XIST-201ENST00000416330 LCE2DQ5TA82 110 aaPredicted RBP12.4□□□□□ -0.42
XIST-201ENST00000416330 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
XIST-201ENST00000416330 PYGBP11216 843 aa12.35□□□□□ -0.43
XIST-201ENST00000416330 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
XIST-201ENST00000416330 OCEL1Q9H607 264 aa12.32□□□□□ -0.44
XIST-201ENST00000416330 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
XIST-201ENST00000416330 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
XIST-201ENST00000416330 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
XIST-201ENST00000416330 GSE1Q14687 1217 aa12.27□□□□□ -0.45
XIST-201ENST00000416330 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
XIST-201ENST00000416330 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
XIST-201ENST00000416330 SNPHO15079 494 aa12.26□□□□□ -0.45
XIST-201ENST00000416330 ST18O60284 1047 aa12.25□□□□□ -0.45
XIST-201ENST00000416330 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
XIST-201ENST00000416330 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
XIST-201ENST00000416330 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
XIST-201ENST00000416330 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
XIST-201ENST00000416330 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
XIST-201ENST00000416330 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
XIST-201ENST00000416330 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
XIST-201ENST00000416330 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
XIST-201ENST00000416330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
XIST-201ENST00000416330 PSEN1P49768 467 aa12.09□□□□□ -0.47
XIST-201ENST00000416330 G3V3G9 751 aa12.06□□□□□ -0.48
XIST-201ENST00000416330 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
XIST-201ENST00000416330 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
XIST-201ENST00000416330 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
XIST-201ENST00000416330 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
XIST-201ENST00000416330 EMP3P54852 163 aa12□□□□□ -0.49
XIST-201ENST00000416330 SPOCK2Q92563 424 aa12□□□□□ -0.49
XIST-201ENST00000416330 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
XIST-201ENST00000416330 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
XIST-201ENST00000416330 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
XIST-201ENST00000416330 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
XIST-201ENST00000416330 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
XIST-201ENST00000416330 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
XIST-201ENST00000416330 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
XIST-201ENST00000416330 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
XIST-201ENST00000416330 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
XIST-201ENST00000416330 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
XIST-201ENST00000416330 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
XIST-201ENST00000416330 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
XIST-201ENST00000416330 DOK7Q18PE1 504 aa11.81□□□□□ -0.52
XIST-201ENST00000416330 RIMBP2O15034 1052 aa11.79□□□□□ -0.52
XIST-201ENST00000416330 ERBB3P21860 1342 aa11.76□□□□□ -0.53
XIST-201ENST00000416330 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
XIST-201ENST00000416330 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
XIST-201ENST00000416330 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
XIST-201ENST00000416330 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
XIST-201ENST00000416330 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
XIST-201ENST00000416330 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
XIST-201ENST00000416330 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
XIST-201ENST00000416330 SOX12O15370 315 aa11.67□□□□□ -0.54
XIST-201ENST00000416330 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
XIST-201ENST00000416330 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
XIST-201ENST00000416330 VARS2Q5ST30 1063 aaKnown RBP11.63□□□□□ -0.55
XIST-201ENST00000416330 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
XIST-201ENST00000416330 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
XIST-201ENST00000416330 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms