RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
PTPRK-210ENST00000415055 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
PTPRK-210ENST00000415055 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
PTPRK-210ENST00000415055 KIF12Q96FN5 646 aa10.77□□□□□ -0.69
PTPRK-210ENST00000415055 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-210ENST00000415055 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
PTPRK-210ENST00000415055 ATMINO43313 823 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-210ENST00000415055 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
PTPRK-210ENST00000415055 NUBP1P53384 320 aa10.71□□□□□ -0.69
PTPRK-210ENST00000415055 MAP3K13O43283 966 aa10.7□□□□□ -0.7
PTPRK-210ENST00000415055 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
PTPRK-210ENST00000415055 ABCC9O60706 1549 aa10.68□□□□□ -0.7
PTPRK-210ENST00000415055 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
PTPRK-210ENST00000415055 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
PTPRK-210ENST00000415055 C7P10643 843 aa10.66□□□□□ -0.7
PTPRK-210ENST00000415055 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
PTPRK-210ENST00000415055 FAM212AQ96EL1 285 aa10.65□□□□□ -0.7
PTPRK-210ENST00000415055 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
PTPRK-210ENST00000415055 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-210ENST00000415055 TIE1P35590 1138 aa10.63□□□□□ -0.71
PTPRK-210ENST00000415055 TRPC6Q9Y210 931 aa10.63□□□□□ -0.71
PTPRK-210ENST00000415055 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
PTPRK-210ENST00000415055 PCDHB13Q9Y5F0 798 aa10.61□□□□□ -0.71
PTPRK-210ENST00000415055 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-210ENST00000415055 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
PTPRK-210ENST00000415055 DCAF8Q5TAQ9 597 aa10.56□□□□□ -0.72
PTPRK-210ENST00000415055 IFNL1Q8IU54 200 aa10.54□□□□□ -0.72
PTPRK-210ENST00000415055 KLHL34Q8N239 644 aa10.54□□□□□ -0.72
PTPRK-210ENST00000415055 POTEJP0CG39 1038 aa10.52□□□□□ -0.73
PTPRK-210ENST00000415055 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
PTPRK-210ENST00000415055 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
PTPRK-210ENST00000415055 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
PTPRK-210ENST00000415055 PYGBP11216 843 aa10.49□□□□□ -0.73
PTPRK-210ENST00000415055 SEC24BO95487 1268 aa10.47□□□□□ -0.73
PTPRK-210ENST00000415055 IER5LQ5T953 404 aa10.47□□□□□ -0.73
PTPRK-210ENST00000415055 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
PTPRK-210ENST00000415055 GSE1Q14687 1217 aa10.46□□□□□ -0.73
PTPRK-210ENST00000415055 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
PTPRK-210ENST00000415055 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-210ENST00000415055 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
PTPRK-210ENST00000415055 CHRM1P11229 460 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-210ENST00000415055 IFNLR1Q8IU57 520 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-210ENST00000415055 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
PTPRK-210ENST00000415055 PLCG2P16885 1265 aa10.36□□□□□ -0.75
PTPRK-210ENST00000415055 ZNF467Q7Z7K2 595 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-210ENST00000415055 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
PTPRK-210ENST00000415055 IRX5P78411 483 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-210ENST00000415055 POTEMA6NI47 508 aa10.32□□□□□ -0.76
PTPRK-210ENST00000415055 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
PTPRK-210ENST00000415055 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
PTPRK-210ENST00000415055 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-210ENST00000415055 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-210ENST00000415055 PSEN1P49768 467 aa10.26□□□□□ -0.77
PTPRK-210ENST00000415055 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
PTPRK-210ENST00000415055 MKRN3Q13064 507 aaKnown RBP10.24□□□□□ -0.77
PTPRK-210ENST00000415055 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-210ENST00000415055 SLAIN1Q8ND83 568 aa10.24□□□□□ -0.77
PTPRK-210ENST00000415055 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
PTPRK-210ENST00000415055 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
PTPRK-210ENST00000415055 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
PTPRK-210ENST00000415055 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
PTPRK-210ENST00000415055 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
PTPRK-210ENST00000415055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.784e-9■■□□□ 11.6
PTPRK-210ENST00000415055 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
PTPRK-210ENST00000415055 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-210ENST00000415055 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
PTPRK-210ENST00000415055 ILDR1Q86SU0 546 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-210ENST00000415055 ST18O60284 1047 aa10.1□□□□□ -0.79
PTPRK-210ENST00000415055 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
PTPRK-210ENST00000415055 SNPHO15079 494 aa10.09□□□□□ -0.79
PTPRK-210ENST00000415055 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
PTPRK-210ENST00000415055 G3V3G9 751 aa10.03□□□□□ -0.8
PTPRK-210ENST00000415055 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
PTPRK-210ENST00000415055 TMEM121BQ9BXQ6 578 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-210ENST00000415055 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
PTPRK-210ENST00000415055 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
PTPRK-210ENST00000415055 EFCAB3Q8N7B9 438 aa10.01□□□□□ -0.81
PTPRK-210ENST00000415055 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
PTPRK-210ENST00000415055 RB1CC1Q8TDY2 1594 aa10□□□□□ -0.81
PTPRK-210ENST00000415055 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
PTPRK-210ENST00000415055 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
PTPRK-210ENST00000415055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-210ENST00000415055 ZFP91Q96JP5 570 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-210ENST00000415055 SOX12O15370 315 aa9.94□□□□□ -0.82
PTPRK-210ENST00000415055 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
PTPRK-210ENST00000415055 TAOK2Q9UL54 1235 aa9.92□□□□□ -0.82
PTPRK-210ENST00000415055 EMP3P54852 163 aa9.88□□□□□ -0.83
PTPRK-210ENST00000415055 MICALL2Q8IY33 904 aa9.87□□□□□ -0.83
PTPRK-210ENST00000415055 PHF8Q9UPP1 1060 aa9.87□□□□□ -0.83
PTPRK-210ENST00000415055 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-210ENST00000415055 DCAF8L2P0C7V8 631 aa9.86□□□□□ -0.83
PTPRK-210ENST00000415055 MS4A4AQ96JQ5 239 aa9.86□□□□□ -0.83
PTPRK-210ENST00000415055 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-210ENST00000415055 SLC24A1O60721 1099 aa9.85□□□□□ -0.83
PTPRK-210ENST00000415055 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-210ENST00000415055 UNC13AQ9UPW8 1703 aa9.84□□□□□ -0.83
PTPRK-210ENST00000415055 NLRP6P59044 892 aa9.83□□□□□ -0.84
PTPRK-210ENST00000415055 DOK7Q18PE1 504 aa9.83□□□□□ -0.84
PTPRK-210ENST00000415055 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
PTPRK-210ENST00000415055 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms