RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
PTPRK-209ENST00000415046 NUBP1P53384 320 aa13.49□□□□□ -0.25
PTPRK-209ENST00000415046 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
PTPRK-209ENST00000415046 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
PTPRK-209ENST00000415046 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
PTPRK-209ENST00000415046 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
PTPRK-209ENST00000415046 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
PTPRK-209ENST00000415046 MAP3K13O43283 966 aa13.32□□□□□ -0.28
PTPRK-209ENST00000415046 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-209ENST00000415046 ASTLQ6HA08 431 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-209ENST00000415046 SGIP1Q9BQI5 828 aa13.27□□□□□ -0.29
PTPRK-209ENST00000415046 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
PTPRK-209ENST00000415046 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-209ENST00000415046 LHX8Q68G74 356 aa13.24□□□□□ -0.29
PTPRK-209ENST00000415046 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
PTPRK-209ENST00000415046 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
PTPRK-209ENST00000415046 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
PTPRK-209ENST00000415046 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
PTPRK-209ENST00000415046 TIE1P35590 1138 aa13.2□□□□□ -0.3
PTPRK-209ENST00000415046 GSE1Q14687 1217 aa13.2□□□□□ -0.3
PTPRK-209ENST00000415046 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-209ENST00000415046 PYGBP11216 843 aa13.17□□□□□ -0.3
PTPRK-209ENST00000415046 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
PTPRK-209ENST00000415046 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-209ENST00000415046 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
PTPRK-209ENST00000415046 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
PTPRK-209ENST00000415046 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
PTPRK-209ENST00000415046 C7P10643 843 aa13.11□□□□□ -0.31
PTPRK-209ENST00000415046 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-209ENST00000415046 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
PTPRK-209ENST00000415046 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
PTPRK-209ENST00000415046 PCDHB8Q9UN66 801 aa13.04□□□□□ -0.32
PTPRK-209ENST00000415046 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
PTPRK-209ENST00000415046 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
PTPRK-209ENST00000415046 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
PTPRK-209ENST00000415046 IER5LQ5T953 404 aa12.99□□□□□ -0.33
PTPRK-209ENST00000415046 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
PTPRK-209ENST00000415046 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
PTPRK-209ENST00000415046 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
PTPRK-209ENST00000415046 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
PTPRK-209ENST00000415046 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-209ENST00000415046 SEC24BO95487 1268 aa12.89□□□□□ -0.35
PTPRK-209ENST00000415046 PSEN1P49768 467 aa12.88□□□□□ -0.35
PTPRK-209ENST00000415046 PDAP1Q13442 181 aaKnown RBP12.88□□□□□ -0.35
PTPRK-209ENST00000415046 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
PTPRK-209ENST00000415046 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
PTPRK-209ENST00000415046 PLCG2P16885 1265 aa12.82□□□□□ -0.36
PTPRK-209ENST00000415046 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
PTPRK-209ENST00000415046 OCEL1Q9H607 264 aa12.79□□□□□ -0.36
PTPRK-209ENST00000415046 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
PTPRK-209ENST00000415046 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-209ENST00000415046 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
PTPRK-209ENST00000415046 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
PTPRK-209ENST00000415046 PDCD7Q8N8D1 485 aaKnown RBP12.72□□□□□ -0.37
PTPRK-209ENST00000415046 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
PTPRK-209ENST00000415046 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-209ENST00000415046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.382e-9■□□□□ 10
PTPRK-209ENST00000415046 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-209ENST00000415046 PKD2Q13563 968 aa12.67□□□□□ -0.38
PTPRK-209ENST00000415046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-209ENST00000415046 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-209ENST00000415046 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-209ENST00000415046 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
PTPRK-209ENST00000415046 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
PTPRK-209ENST00000415046 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-209ENST00000415046 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
PTPRK-209ENST00000415046 RGL2O15211 777 aa12.56□□□□□ -0.4
PTPRK-209ENST00000415046 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
PTPRK-209ENST00000415046 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
PTPRK-209ENST00000415046 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
PTPRK-209ENST00000415046 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-209ENST00000415046 SOX12O15370 315 aa12.52□□□□□ -0.41
PTPRK-209ENST00000415046 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
PTPRK-209ENST00000415046 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-209ENST00000415046 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
PTPRK-209ENST00000415046 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
PTPRK-209ENST00000415046 STK25O00506 426 aa12.48□□□□□ -0.41
PTPRK-209ENST00000415046 FAM163AQ96GL9 167 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-209ENST00000415046 PHF8Q9UPP1 1060 aa12.46□□□□□ -0.41
PTPRK-209ENST00000415046 G3V3G9 751 aa12.45□□□□□ -0.42
PTPRK-209ENST00000415046 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
PTPRK-209ENST00000415046 POTEMA6NI47 508 aa12.44□□□□□ -0.42
PTPRK-209ENST00000415046 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-209ENST00000415046 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
PTPRK-209ENST00000415046 NLRP6P59044 892 aa12.4□□□□□ -0.42
PTPRK-209ENST00000415046 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
PTPRK-209ENST00000415046 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
PTPRK-209ENST00000415046 SNPHO15079 494 aa12.38□□□□□ -0.43
PTPRK-209ENST00000415046 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
PTPRK-209ENST00000415046 ST18O60284 1047 aa12.35□□□□□ -0.43
PTPRK-209ENST00000415046 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
PTPRK-209ENST00000415046 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
PTPRK-209ENST00000415046 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
PTPRK-209ENST00000415046 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
PTPRK-209ENST00000415046 HOXB3P14651 431 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-209ENST00000415046 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
PTPRK-209ENST00000415046 DOK7Q18PE1 504 aa12.17□□□□□ -0.46
PTPRK-209ENST00000415046 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
PTPRK-209ENST00000415046 PPP1R37O75864 691 aa12.16□□□□□ -0.46
PTPRK-209ENST00000415046 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms