RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 SLC39A7Q92504 469 aa11.35□□□□□ -0.59
AC004987.3-201ENST00000413879 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
AC004987.3-201ENST00000413879 C7P10643 843 aa11.34□□□□□ -0.59
AC004987.3-201ENST00000413879 POTEMA6NI47 508 aa11.33□□□□□ -0.6
AC004987.3-201ENST00000413879 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
AC004987.3-201ENST00000413879 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
AC004987.3-201ENST00000413879 MAMSTRQ6ZN01 415 aa11.28□□□□□ -0.6
AC004987.3-201ENST00000413879 MIER1Q8N108 512 aa11.26□□□□□ -0.61
AC004987.3-201ENST00000413879 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
AC004987.3-201ENST00000413879 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
AC004987.3-201ENST00000413879 PROM2Q8N271 834 aa11.23□□□□□ -0.61
AC004987.3-201ENST00000413879 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
AC004987.3-201ENST00000413879 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
AC004987.3-201ENST00000413879 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
AC004987.3-201ENST00000413879 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
AC004987.3-201ENST00000413879 MAP3K13O43283 966 aa11.17□□□□□ -0.62
AC004987.3-201ENST00000413879 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
AC004987.3-201ENST00000413879 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
AC004987.3-201ENST00000413879 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
AC004987.3-201ENST00000413879 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
AC004987.3-201ENST00000413879 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
AC004987.3-201ENST00000413879 SEC24BO95487 1268 aa11.12□□□□□ -0.63
AC004987.3-201ENST00000413879 TIE1P35590 1138 aa11.12□□□□□ -0.63
AC004987.3-201ENST00000413879 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
AC004987.3-201ENST00000413879 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
AC004987.3-201ENST00000413879 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
AC004987.3-201ENST00000413879 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
AC004987.3-201ENST00000413879 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
AC004987.3-201ENST00000413879 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
AC004987.3-201ENST00000413879 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
AC004987.3-201ENST00000413879 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
AC004987.3-201ENST00000413879 IER5LQ5T953 404 aa10.97□□□□□ -0.65
AC004987.3-201ENST00000413879 NUBP1P53384 320 aa10.94□□□□□ -0.66
AC004987.3-201ENST00000413879 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
AC004987.3-201ENST00000413879 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
AC004987.3-201ENST00000413879 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
AC004987.3-201ENST00000413879 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
AC004987.3-201ENST00000413879 PLCG2P16885 1265 aa10.9□□□□□ -0.66
AC004987.3-201ENST00000413879 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
AC004987.3-201ENST00000413879 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
AC004987.3-201ENST00000413879 ST18O60284 1047 aa10.83□□□□□ -0.68
AC004987.3-201ENST00000413879 FKBP8Q14318 412 aa10.83□□□□□ -0.68
AC004987.3-201ENST00000413879 PYGBP11216 843 aa10.8□□□□□ -0.68
AC004987.3-201ENST00000413879 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
AC004987.3-201ENST00000413879 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
AC004987.3-201ENST00000413879 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
AC004987.3-201ENST00000413879 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
AC004987.3-201ENST00000413879 SNPHO15079 494 aa10.74□□□□□ -0.69
AC004987.3-201ENST00000413879 FBXO3Q9UK99 471 aa10.71□□□□□ -0.69
AC004987.3-201ENST00000413879 KLHL34Q8N239 644 aa10.7□□□□□ -0.7
AC004987.3-201ENST00000413879 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
AC004987.3-201ENST00000413879 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
AC004987.3-201ENST00000413879 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
AC004987.3-201ENST00000413879 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
AC004987.3-201ENST00000413879 GSE1Q14687 1217 aa10.64□□□□□ -0.71
AC004987.3-201ENST00000413879 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
AC004987.3-201ENST00000413879 C3orf67Q6ZVT6 689 aa10.62□□□□□ -0.71
AC004987.3-201ENST00000413879 L3MBTL3Q96JM7 780 aaPredicted RBP10.62□□□□□ -0.71
AC004987.3-201ENST00000413879 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
AC004987.3-201ENST00000413879 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
AC004987.3-201ENST00000413879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.72
AC004987.3-201ENST00000413879 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
AC004987.3-201ENST00000413879 PSEN1P49768 467 aa10.55□□□□□ -0.72
AC004987.3-201ENST00000413879 EMP3P54852 163 aa10.55□□□□□ -0.72
AC004987.3-201ENST00000413879 CHRM1P11229 460 aaPredicted RBP10.53□□□□□ -0.72
AC004987.3-201ENST00000413879 VASPP50552 380 aaPredicted RBP10.53□□□□□ -0.72
AC004987.3-201ENST00000413879 G3V3G9 751 aa10.5□□□□□ -0.73
AC004987.3-201ENST00000413879 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
AC004987.3-201ENST00000413879 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
AC004987.3-201ENST00000413879 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
AC004987.3-201ENST00000413879 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
AC004987.3-201ENST00000413879 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
AC004987.3-201ENST00000413879 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
AC004987.3-201ENST00000413879 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
AC004987.3-201ENST00000413879 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
AC004987.3-201ENST00000413879 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
AC004987.3-201ENST00000413879 ZNF710Q8N1W2 664 aa10.39□□□□□ -0.75
AC004987.3-201ENST00000413879 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
AC004987.3-201ENST00000413879 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
AC004987.3-201ENST00000413879 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
AC004987.3-201ENST00000413879 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
AC004987.3-201ENST00000413879 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
AC004987.3-201ENST00000413879 ERBB3P21860 1342 aa10.33□□□□□ -0.76
AC004987.3-201ENST00000413879 DOK7Q18PE1 504 aa10.32□□□□□ -0.76
AC004987.3-201ENST00000413879 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
AC004987.3-201ENST00000413879 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
AC004987.3-201ENST00000413879 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
AC004987.3-201ENST00000413879 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
AC004987.3-201ENST00000413879 VARS2Q5ST30 1063 aaKnown RBP10.22□□□□□ -0.77
AC004987.3-201ENST00000413879 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
AC004987.3-201ENST00000413879 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
AC004987.3-201ENST00000413879 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
AC004987.3-201ENST00000413879 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
AC004987.3-201ENST00000413879 SOX12O15370 315 aa10.15□□□□□ -0.78
AC004987.3-201ENST00000413879 MYT1LQ9UL68 1186 aa10.15□□□□□ -0.78
AC004987.3-201ENST00000413879 ZNF687Q8N1G0 1237 aa10.14□□□□□ -0.79
AC004987.3-201ENST00000413879 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
AC004987.3-201ENST00000413879 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
AC004987.3-201ENST00000413879 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
AC004987.3-201ENST00000413879 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms