RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
RAB28P1-201ENST00000411517 CLCN6P51797 869 aa11.13□□□□□ -0.63
RAB28P1-201ENST00000411517 SHROOM4Q9ULL8 1493 aa11.1□□□□□ -0.63
RAB28P1-201ENST00000411517 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
RAB28P1-201ENST00000411517 GALR2O43603 387 aaPredicted RBP11.06□□□□□ -0.64
RAB28P1-201ENST00000411517 EIF4G1Q04637 1599 aaKnown RBP11.06□□□□□ -0.64
RAB28P1-201ENST00000411517 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
RAB28P1-201ENST00000411517 PROM2Q8N271 834 aa11.04□□□□□ -0.64
RAB28P1-201ENST00000411517 POTEMA6NI47 508 aa10.99□□□□□ -0.65
RAB28P1-201ENST00000411517 OTUD5Q96G74 571 aa10.99□□□□□ -0.65
RAB28P1-201ENST00000411517 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
RAB28P1-201ENST00000411517 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
RAB28P1-201ENST00000411517 MIER1Q8N108 512 aa10.96□□□□□ -0.65
RAB28P1-201ENST00000411517 POTEB2H3BUK9 544 aa10.94□□□□□ -0.66
RAB28P1-201ENST00000411517 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
RAB28P1-201ENST00000411517 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
RAB28P1-201ENST00000411517 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
RAB28P1-201ENST00000411517 ERCC6Q03468 1493 aa10.9□□□□□ -0.66
RAB28P1-201ENST00000411517 FKBP8Q14318 412 aa10.89□□□□□ -0.67
RAB28P1-201ENST00000411517 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
RAB28P1-201ENST00000411517 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
RAB28P1-201ENST00000411517 MYO15BQ96JP2 1530 aa10.86□□□□□ -0.67
RAB28P1-201ENST00000411517 PELP1Q8IZL8 1130 aaKnown RBP10.83□□□□□ -0.68
RAB28P1-201ENST00000411517 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
RAB28P1-201ENST00000411517 RASEFQ8IZ41 740 aa10.81□□□□□ -0.68
RAB28P1-201ENST00000411517 ATMINO43313 823 aaPredicted RBP10.78□□□□□ -0.68
RAB28P1-201ENST00000411517 KIF12Q96FN5 646 aa10.78□□□□□ -0.68
RAB28P1-201ENST00000411517 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
RAB28P1-201ENST00000411517 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
RAB28P1-201ENST00000411517 MAP3K13O43283 966 aa10.75□□□□□ -0.69
RAB28P1-201ENST00000411517 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
RAB28P1-201ENST00000411517 SLC39A7Q92504 469 aa10.74□□□□□ -0.69
RAB28P1-201ENST00000411517 ATN1P54259 1190 aaPredicted RBP10.72□□□□□ -0.69
RAB28P1-201ENST00000411517 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
RAB28P1-201ENST00000411517 C7P10643 843 aa10.71□□□□□ -0.69
RAB28P1-201ENST00000411517 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
RAB28P1-201ENST00000411517 NUBP1P53384 320 aa10.67□□□□□ -0.7
RAB28P1-201ENST00000411517 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
RAB28P1-201ENST00000411517 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
RAB28P1-201ENST00000411517 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
RAB28P1-201ENST00000411517 PCDHB13Q9Y5F0 798 aa10.65□□□□□ -0.7
RAB28P1-201ENST00000411517 TIE1P35590 1138 aa10.64□□□□□ -0.71
RAB28P1-201ENST00000411517 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
RAB28P1-201ENST00000411517 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
RAB28P1-201ENST00000411517 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
RAB28P1-201ENST00000411517 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
RAB28P1-201ENST00000411517 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
RAB28P1-201ENST00000411517 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
RAB28P1-201ENST00000411517 FAM163AQ96GL9 167 aaPredicted RBP10.59□□□□□ -0.71
RAB28P1-201ENST00000411517 SEC24BO95487 1268 aa10.58□□□□□ -0.72
RAB28P1-201ENST00000411517 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
RAB28P1-201ENST00000411517 SGIP1Q9BQI5 828 aa10.57□□□□□ -0.72
RAB28P1-201ENST00000411517 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
RAB28P1-201ENST00000411517 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
RAB28P1-201ENST00000411517 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
RAB28P1-201ENST00000411517 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
RAB28P1-201ENST00000411517 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
RAB28P1-201ENST00000411517 PYGBP11216 843 aa10.53□□□□□ -0.72
RAB28P1-201ENST00000411517 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
RAB28P1-201ENST00000411517 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.72
RAB28P1-201ENST00000411517 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
RAB28P1-201ENST00000411517 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
RAB28P1-201ENST00000411517 RIMBP3CA6NJZ7 1639 aa10.5□□□□□ -0.73
RAB28P1-201ENST00000411517 RIMBP3BA6NNM3 1639 aa10.5□□□□□ -0.73
RAB28P1-201ENST00000411517 RIMBP3Q9UFD9 1639 aa10.5□□□□□ -0.73
RAB28P1-201ENST00000411517 NESP48681 1621 aa10.48□□□□□ -0.73
RAB28P1-201ENST00000411517 IER5LQ5T953 404 aa10.47□□□□□ -0.73
RAB28P1-201ENST00000411517 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
RAB28P1-201ENST00000411517 SMARCA2P51531 1590 aa10.43□□□□□ -0.74
RAB28P1-201ENST00000411517 PLCG2P16885 1265 aa10.43□□□□□ -0.74
RAB28P1-201ENST00000411517 GSE1Q14687 1217 aa10.41□□□□□ -0.74
RAB28P1-201ENST00000411517 CDAN1Q8IWY9 1227 aa10.4□□□□□ -0.74
RAB28P1-201ENST00000411517 NCAPD3P42695 1498 aa10.4□□□□□ -0.74
RAB28P1-201ENST00000411517 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
RAB28P1-201ENST00000411517 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
RAB28P1-201ENST00000411517 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
RAB28P1-201ENST00000411517 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
RAB28P1-201ENST00000411517 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
RAB28P1-201ENST00000411517 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
RAB28P1-201ENST00000411517 LAMC3Q9Y6N6 1575 aa10.34□□□□□ -0.75
RAB28P1-201ENST00000411517 CIZ1Q9ULV3 898 aaPredicted RBP10.33□□□□□ -0.76
RAB28P1-201ENST00000411517 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
RAB28P1-201ENST00000411517 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
RAB28P1-201ENST00000411517 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
RAB28P1-201ENST00000411517 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
RAB28P1-201ENST00000411517 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
RAB28P1-201ENST00000411517 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
RAB28P1-201ENST00000411517 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
RAB28P1-201ENST00000411517 WDR62O43379 1518 aa10.28□□□□□ -0.76
RAB28P1-201ENST00000411517 PSEN1P49768 467 aa10.27□□□□□ -0.77
RAB28P1-201ENST00000411517 CYB5RLQ6IPT4 315 aa10.27□□□□□ -0.77
RAB28P1-201ENST00000411517 CHRM1P11229 460 aaPredicted RBP10.26□□□□□ -0.77
RAB28P1-201ENST00000411517 MRC2Q9UBG0 1479 aa10.25□□□□□ -0.77
RAB28P1-201ENST00000411517 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.24□□□□□ -0.77
RAB28P1-201ENST00000411517 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
RAB28P1-201ENST00000411517 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
RAB28P1-201ENST00000411517 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
RAB28P1-201ENST00000411517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAB28P1-201ENST00000411517 PDAP1Q13442 181 aaKnown RBP10.2□□□□□ -0.78
RAB28P1-201ENST00000411517 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms