RNA–Protein interactions for RNA: ENST00000410144.1

RNU2-3P-201, Transcript of RNA, U2 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU2-3P, Length 191 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-3P-201ENST00000410144 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
RNU2-3P-201ENST00000410144 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
RNU2-3P-201ENST00000410144 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
RNU2-3P-201ENST00000410144 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
RNU2-3P-201ENST00000410144 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
RNU2-3P-201ENST00000410144 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
RNU2-3P-201ENST00000410144 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
RNU2-3P-201ENST00000410144 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
RNU2-3P-201ENST00000410144 ATN1P54259 1190 aaPredicted RBP10.78□□□□□ -0.68
RNU2-3P-201ENST00000410144 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
RNU2-3P-201ENST00000410144 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
RNU2-3P-201ENST00000410144 TSPYL2Q9H2G4 693 aaPredicted RBP10.68□□□□□ -0.7
RNU2-3P-201ENST00000410144 BMP2KQ9NSY1 1161 aaPredicted RBP10.68□□□□□ -0.7
RNU2-3P-201ENST00000410144 CCDC61Q9Y6R9 512 aa10.66□□□□□ -0.7
RNU2-3P-201ENST00000410144 SEC24BO95487 1268 aa10.64□□□□□ -0.71
RNU2-3P-201ENST00000410144 KIF12Q96FN5 646 aa10.64□□□□□ -0.71
RNU2-3P-201ENST00000410144 TIE1P35590 1138 aa10.63□□□□□ -0.71
RNU2-3P-201ENST00000410144 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
RNU2-3P-201ENST00000410144 ST18O60284 1047 aa10.58□□□□□ -0.72
RNU2-3P-201ENST00000410144 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
RNU2-3P-201ENST00000410144 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
RNU2-3P-201ENST00000410144 IER5LQ5T953 404 aa10.55□□□□□ -0.72
RNU2-3P-201ENST00000410144 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
RNU2-3P-201ENST00000410144 TTLL13PA6NNM8 815 aa10.54□□□□□ -0.72
RNU2-3P-201ENST00000410144 MAP3K13O43283 966 aa10.54□□□□□ -0.72
RNU2-3P-201ENST00000410144 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
RNU2-3P-201ENST00000410144 TMEM121BQ9BXQ6 578 aaPredicted RBP10.49□□□□□ -0.73
RNU2-3P-201ENST00000410144 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
RNU2-3P-201ENST00000410144 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
RNU2-3P-201ENST00000410144 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
RNU2-3P-201ENST00000410144 SNPHO15079 494 aa10.4□□□□□ -0.74
RNU2-3P-201ENST00000410144 PLCG2P16885 1265 aa10.39□□□□□ -0.75
RNU2-3P-201ENST00000410144 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
RNU2-3P-201ENST00000410144 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
RNU2-3P-201ENST00000410144 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
RNU2-3P-201ENST00000410144 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
RNU2-3P-201ENST00000410144 PROM2Q8N271 834 aa10.32□□□□□ -0.76
RNU2-3P-201ENST00000410144 TMEM106CQ9BVX2 250 aa10.31□□□□□ -0.76
RNU2-3P-201ENST00000410144 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
RNU2-3P-201ENST00000410144 MIER1Q8N108 512 aa10.29□□□□□ -0.76
RNU2-3P-201ENST00000410144 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
RNU2-3P-201ENST00000410144 IFNL1Q8IU54 200 aa10.27□□□□□ -0.77
RNU2-3P-201ENST00000410144 OCEL1Q9H607 264 aa10.25□□□□□ -0.77
RNU2-3P-201ENST00000410144 EMP3P54852 163 aa10.24□□□□□ -0.77
RNU2-3P-201ENST00000410144 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
RNU2-3P-201ENST00000410144 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
RNU2-3P-201ENST00000410144 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
RNU2-3P-201ENST00000410144 HS3ST6Q96QI5 342 aa10.16□□□□□ -0.78
RNU2-3P-201ENST00000410144 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
RNU2-3P-201ENST00000410144 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
RNU2-3P-201ENST00000410144 FAM212AQ96EL1 285 aa10.14□□□□□ -0.79
RNU2-3P-201ENST00000410144 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
RNU2-3P-201ENST00000410144 NUBP1P53384 320 aa10.13□□□□□ -0.79
RNU2-3P-201ENST00000410144 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
RNU2-3P-201ENST00000410144 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
RNU2-3P-201ENST00000410144 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
RNU2-3P-201ENST00000410144 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.81
RNU2-3P-201ENST00000410144 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
RNU2-3P-201ENST00000410144 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
RNU2-3P-201ENST00000410144 PYGBP11216 843 aa9.96□□□□□ -0.82
RNU2-3P-201ENST00000410144 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
RNU2-3P-201ENST00000410144 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
RNU2-3P-201ENST00000410144 DCAF8Q5TAQ9 597 aa9.93□□□□□ -0.82
RNU2-3P-201ENST00000410144 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
RNU2-3P-201ENST00000410144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.82
RNU2-3P-201ENST00000410144 ERBB3P21860 1342 aa9.9□□□□□ -0.82
RNU2-3P-201ENST00000410144 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
RNU2-3P-201ENST00000410144 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
RNU2-3P-201ENST00000410144 EHMT2Q96KQ7 1210 aa9.88□□□□□ -0.83
RNU2-3P-201ENST00000410144 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
RNU2-3P-201ENST00000410144 ZNF467Q7Z7K2 595 aaPredicted RBP9.87□□□□□ -0.83
RNU2-3P-201ENST00000410144 G3V3G9 751 aa9.85□□□□□ -0.83
RNU2-3P-201ENST00000410144 DOK7Q18PE1 504 aa9.85□□□□□ -0.83
RNU2-3P-201ENST00000410144 PTGER2P43116 358 aa9.84□□□□□ -0.83
RNU2-3P-201ENST00000410144 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
RNU2-3P-201ENST00000410144 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
RNU2-3P-201ENST00000410144 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
RNU2-3P-201ENST00000410144 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
RNU2-3P-201ENST00000410144 PSEN1P49768 467 aa9.76□□□□□ -0.85
RNU2-3P-201ENST00000410144 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
RNU2-3P-201ENST00000410144 ZNF687Q8N1G0 1237 aa9.75□□□□□ -0.85
RNU2-3P-201ENST00000410144 GSE1Q14687 1217 aa9.73□□□□□ -0.85
RNU2-3P-201ENST00000410144 CHRM1P11229 460 aaPredicted RBP9.7□□□□□ -0.86
RNU2-3P-201ENST00000410144 ZSWIM6Q9HCJ5 1215 aa9.7□□□□□ -0.86
RNU2-3P-201ENST00000410144 PDAP1Q13442 181 aaKnown RBP9.68□□□□□ -0.86
RNU2-3P-201ENST00000410144 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
RNU2-3P-201ENST00000410144 CABP2Q9NPB3 220 aa9.64□□□□□ -0.87
RNU2-3P-201ENST00000410144 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
RNU2-3P-201ENST00000410144 GPR153Q6NV75 609 aa9.6□□□□□ -0.87
RNU2-3P-201ENST00000410144 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
RNU2-3P-201ENST00000410144 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
RNU2-3P-201ENST00000410144 HCSTQ9UBK5 93 aa9.55□□□□□ -0.88
RNU2-3P-201ENST00000410144 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
RNU2-3P-201ENST00000410144 ZNF316A6NFI3 1004 aaPredicted RBP9.5□□□□□ -0.89
RNU2-3P-201ENST00000410144 PBX2P40425 430 aa9.5□□□□□ -0.89
RNU2-3P-201ENST00000410144 ARSIQ5FYB1 569 aa9.5□□□□□ -0.89
RNU2-3P-201ENST00000410144 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
RNU2-3P-201ENST00000410144 MICALL2Q8IY33 904 aa9.5□□□□□ -0.89
RNU2-3P-201ENST00000410144 FKBP8Q14318 412 aa9.47□□□□□ -0.89
RNU2-3P-201ENST00000410144 EFCAB3Q8N7B9 438 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms