RNA–Protein interactions for RNA: ENST00000409911.5

LRRTM4-205, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LRRTM4, Length 2,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-205ENST00000409911 FGD1P98174 961 aa9.74□□□□□ -0.85
LRRTM4-205ENST00000409911 TNIKQ9UKE5 1360 aa9.74□□□□□ -0.85
LRRTM4-205ENST00000409911 GOLGA3Q08378 1498 aa9.73□□□□□ -0.85
LRRTM4-205ENST00000409911 KIF21BO75037 1637 aa9.71□□□□□ -0.85
LRRTM4-205ENST00000409911 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.86
LRRTM4-205ENST00000409911 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
LRRTM4-205ENST00000409911 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
LRRTM4-205ENST00000409911 SUPT16HQ9Y5B9 1047 aaKnown RBP9.7□□□□□ -0.86
LRRTM4-205ENST00000409911 FGD5Q6ZNL6 1462 aa9.68□□□□□ -0.86
LRRTM4-205ENST00000409911 A0A0U1RQG5 324 aaPredicted RBP9.68□□□□□ -0.86
LRRTM4-205ENST00000409911 GLIPR1L2Q4G1C9 344 aa9.67□□□□□ -0.86
LRRTM4-205ENST00000409911 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
LRRTM4-205ENST00000409911 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
LRRTM4-205ENST00000409911 ZMYND15Q9H091 742 aa9.65□□□□□ -0.87
LRRTM4-205ENST00000409911 RAD54L2Q9Y4B4 1467 aa9.65□□□□□ -0.87
LRRTM4-205ENST00000409911 CUX2O14529 1486 aa9.64□□□□□ -0.87
LRRTM4-205ENST00000409911 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
LRRTM4-205ENST00000409911 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
LRRTM4-205ENST00000409911 AAMPQ13685 434 aa9.64□□□□□ -0.87
LRRTM4-205ENST00000409911 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
LRRTM4-205ENST00000409911 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
LRRTM4-205ENST00000409911 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
LRRTM4-205ENST00000409911 IGF1RP08069 1367 aa9.62□□□□□ -0.87
LRRTM4-205ENST00000409911 CLIP1P30622 1438 aa9.62□□□□□ -0.87
LRRTM4-205ENST00000409911 KIF21AQ7Z4S6 1674 aa9.61□□□□□ -0.87
LRRTM4-205ENST00000409911 DNMBPQ6XZF7 1577 aa9.61□□□□□ -0.87
LRRTM4-205ENST00000409911 POLA1P09884 1462 aaPredicted RBP9.61□□□□□ -0.87
LRRTM4-205ENST00000409911 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
LRRTM4-205ENST00000409911 ERICH3Q5RHP9 1530 aa9.6□□□□□ -0.87
LRRTM4-205ENST00000409911 MSH5O43196 834 aa9.59□□□□□ -0.87
LRRTM4-205ENST00000409911 RBM10P98175 930 aaKnown RBP9.59□□□□□ -0.87
LRRTM4-205ENST00000409911 PHF23Q9BUL5 403 aaPredicted RBP9.58□□□□□ -0.88
LRRTM4-205ENST00000409911 HOMEZQ8IX15 550 aa9.57□□□□□ -0.88
LRRTM4-205ENST00000409911 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
LRRTM4-205ENST00000409911 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
LRRTM4-205ENST00000409911 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
LRRTM4-205ENST00000409911 KCNA4P22459 653 aa9.55□□□□□ -0.88
LRRTM4-205ENST00000409911 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
LRRTM4-205ENST00000409911 ABCA10Q8WWZ4 1543 aa9.55□□□□□ -0.88
LRRTM4-205ENST00000409911 CARMIL1Q5VZK9 1371 aa9.54□□□□□ -0.88
LRRTM4-205ENST00000409911 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
LRRTM4-205ENST00000409911 PDS5BQ9NTI5 1447 aa9.54□□□□□ -0.88
LRRTM4-205ENST00000409911 TDRD9Q8NDG6 1382 aaKnown RBP9.53□□□□□ -0.88
LRRTM4-205ENST00000409911 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
LRRTM4-205ENST00000409911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.52□□□□□ -0.88
LRRTM4-205ENST00000409911 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.88
LRRTM4-205ENST00000409911 ARHGAP35Q9NRY4 1499 aa9.51□□□□□ -0.89
LRRTM4-205ENST00000409911 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
LRRTM4-205ENST00000409911 TARBP1Q13395 1621 aaKnown RBP9.48□□□□□ -0.89
LRRTM4-205ENST00000409911 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
LRRTM4-205ENST00000409911 ABCA5Q8WWZ7 1642 aa9.48□□□□□ -0.89
LRRTM4-205ENST00000409911 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
LRRTM4-205ENST00000409911 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
LRRTM4-205ENST00000409911 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
LRRTM4-205ENST00000409911 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
LRRTM4-205ENST00000409911 GAPVD1Q14C86 1478 aa9.45□□□□□ -0.9
LRRTM4-205ENST00000409911 MRC2Q9UBG0 1479 aa9.44□□□□□ -0.9
LRRTM4-205ENST00000409911 BRD2P25440 801 aaKnown RBP9.44□□□□□ -0.9
LRRTM4-205ENST00000409911 AQRO60306 1485 aaKnown RBP eCLIP9.44□□□□□ -0.9
LRRTM4-205ENST00000409911 PAXIP1Q6ZW49 1069 aaPredicted RBP9.43□□□□□ -0.9
LRRTM4-205ENST00000409911 ZNF608Q9ULD9 1512 aaPredicted RBP9.42□□□□□ -0.9
LRRTM4-205ENST00000409911 CUL7Q14999 1698 aa9.42□□□□□ -0.9
LRRTM4-205ENST00000409911 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
LRRTM4-205ENST00000409911 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
LRRTM4-205ENST00000409911 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.9
LRRTM4-205ENST00000409911 FHOD3Q2V2M9 1422 aa9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 CTTNBP2Q8WZ74 1663 aa9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 WDR62O43379 1518 aa9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 HNRNPUL2Q1KMD3 747 aaKnown RBP9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 ZNF326Q5BKZ1 582 aaKnown RBP9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 MIER1Q8N108 512 aa9.39□□□□□ -0.91
LRRTM4-205ENST00000409911 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
LRRTM4-205ENST00000409911 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
LRRTM4-205ENST00000409911 ERCC6Q03468 1493 aa9.37□□□□□ -0.91
LRRTM4-205ENST00000409911 NAP1L5Q96NT1 182 aaPredicted RBP9.36□□□□□ -0.91
LRRTM4-205ENST00000409911 PCF11O94913 1555 aaKnown RBP9.36□□□□□ -0.91
LRRTM4-205ENST00000409911 SAMD1Q6SPF0 538 aaPredicted RBP9.36□□□□□ -0.91
LRRTM4-205ENST00000409911 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
LRRTM4-205ENST00000409911 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
LRRTM4-205ENST00000409911 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
LRRTM4-205ENST00000409911 IFT140Q96RY7 1462 aa9.33□□□□□ -0.92
LRRTM4-205ENST00000409911 NAP1L2Q9ULW6 460 aaPredicted RBP9.33□□□□□ -0.92
LRRTM4-205ENST00000409911 NBR1Q14596 966 aa9.32□□□□□ -0.92
LRRTM4-205ENST00000409911 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
LRRTM4-205ENST00000409911 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
LRRTM4-205ENST00000409911 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
LRRTM4-205ENST00000409911 GRIN2BQ13224 1484 aa9.32□□□□□ -0.92
LRRTM4-205ENST00000409911 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
LRRTM4-205ENST00000409911 LRRIQ1Q96JM4 1722 aa9.31□□□□□ -0.92
LRRTM4-205ENST00000409911 SAMD9Q5K651 1589 aa9.31□□□□□ -0.92
LRRTM4-205ENST00000409911 RTL5Q5HYW3 569 aaPredicted RBP9.31□□□□□ -0.92
LRRTM4-205ENST00000409911 BCANQ96GW7 911 aa9.31□□□□□ -0.92
LRRTM4-205ENST00000409911 C11orf95C9JLR9 678 aaPredicted RBP9.3□□□□□ -0.92
LRRTM4-205ENST00000409911 SNAPC4Q5SXM2 1469 aa9.3□□□□□ -0.92
LRRTM4-205ENST00000409911 EFCAB5A4FU69 1503 aa9.3□□□□□ -0.92
LRRTM4-205ENST00000409911 LRRC9Q6ZRR7 1453 aa9.29□□□□□ -0.92
LRRTM4-205ENST00000409911 PHLDB1Q86UU1 1377 aa9.28□□□□□ -0.92
LRRTM4-205ENST00000409911 CFAP43Q8NDM7 1665 aa9.28□□□□□ -0.92
LRRTM4-205ENST00000409911 RRBP1Q9P2E9 1410 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms