RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
PTMA-202ENST00000409115 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
PTMA-202ENST00000409115 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.48
PTMA-202ENST00000409115 CHD1O14646 1710 aa18.06■□□□□ 0.48
PTMA-202ENST00000409115 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
PTMA-202ENST00000409115 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
PTMA-202ENST00000409115 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
PTMA-202ENST00000409115 IFT140Q96RY7 1462 aa18■□□□□ 0.47
PTMA-202ENST00000409115 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
PTMA-202ENST00000409115 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
PTMA-202ENST00000409115 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
PTMA-202ENST00000409115 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
PTMA-202ENST00000409115 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.454e-20■■■■■ 37.2
PTMA-202ENST00000409115 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
PTMA-202ENST00000409115 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
PTMA-202ENST00000409115 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
PTMA-202ENST00000409115 RAD54L2Q9Y4B4 1467 aa17.79■□□□□ 0.44
PTMA-202ENST00000409115 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
PTMA-202ENST00000409115 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
PTMA-202ENST00000409115 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
PTMA-202ENST00000409115 SNAPC4Q5SXM2 1469 aa17.71■□□□□ 0.43
PTMA-202ENST00000409115 CUX1P39880 1505 aa17.7■□□□□ 0.42
PTMA-202ENST00000409115 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
PTMA-202ENST00000409115 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
PTMA-202ENST00000409115 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
PTMA-202ENST00000409115 PROM2Q8N271 834 aa17.66■□□□□ 0.42
PTMA-202ENST00000409115 SOGA1O94964 1423 aa17.64■□□□□ 0.42
PTMA-202ENST00000409115 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
PTMA-202ENST00000409115 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
PTMA-202ENST00000409115 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
PTMA-202ENST00000409115 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
PTMA-202ENST00000409115 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
PTMA-202ENST00000409115 MAGI1Q96QZ7 1491 aaPredicted RBP17.58■□□□□ 0.41
PTMA-202ENST00000409115 FBXO3Q9UK99 471 aa17.58■□□□□ 0.4
PTMA-202ENST00000409115 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
PTMA-202ENST00000409115 GRIN2BQ13224 1484 aa17.55■□□□□ 0.4
PTMA-202ENST00000409115 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
PTMA-202ENST00000409115 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
PTMA-202ENST00000409115 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
PTMA-202ENST00000409115 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
PTMA-202ENST00000409115 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
PTMA-202ENST00000409115 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
PTMA-202ENST00000409115 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
PTMA-202ENST00000409115 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
PTMA-202ENST00000409115 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
PTMA-202ENST00000409115 POTEHQ6S545 545 aa17.4■□□□□ 0.38
PTMA-202ENST00000409115 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
PTMA-202ENST00000409115 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
PTMA-202ENST00000409115 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
PTMA-202ENST00000409115 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
PTMA-202ENST00000409115 KIF13AQ9H1H9 1805 aa17.34■□□□□ 0.37
PTMA-202ENST00000409115 VASPP50552 380 aaPredicted RBP17.32■□□□□ 0.36
PTMA-202ENST00000409115 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
PTMA-202ENST00000409115 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
PTMA-202ENST00000409115 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
PTMA-202ENST00000409115 NUP160Q12769 1436 aa17.29■□□□□ 0.36
PTMA-202ENST00000409115 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
PTMA-202ENST00000409115 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
PTMA-202ENST00000409115 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
PTMA-202ENST00000409115 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
PTMA-202ENST00000409115 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
PTMA-202ENST00000409115 AKT1S1Q96B36 256 aa17.14■□□□□ 0.33
PTMA-202ENST00000409115 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
PTMA-202ENST00000409115 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
PTMA-202ENST00000409115 TSPOAP1O95153 1857 aa17.11■□□□□ 0.33
PTMA-202ENST00000409115 DIP2BQ9P265 1576 aa17.08■□□□□ 0.32
PTMA-202ENST00000409115 IFNLR1Q8IU57 520 aaPredicted RBP17.08■□□□□ 0.32
PTMA-202ENST00000409115 CUL7Q14999 1698 aa17.04■□□□□ 0.32
PTMA-202ENST00000409115 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
PTMA-202ENST00000409115 PLCD3Q8N3E9 789 aa17.01■□□□□ 0.31
PTMA-202ENST00000409115 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
PTMA-202ENST00000409115 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
PTMA-202ENST00000409115 KDM6BO15054 1643 aa16.98■□□□□ 0.31
PTMA-202ENST00000409115 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
PTMA-202ENST00000409115 MIER1Q8N108 512 aa16.97■□□□□ 0.31
PTMA-202ENST00000409115 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
PTMA-202ENST00000409115 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
PTMA-202ENST00000409115 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
PTMA-202ENST00000409115 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
PTMA-202ENST00000409115 PPRC1Q5VV67 1664 aaKnown RBP16.91■□□□□ 0.3
PTMA-202ENST00000409115 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
PTMA-202ENST00000409115 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
PTMA-202ENST00000409115 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
PTMA-202ENST00000409115 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
PTMA-202ENST00000409115 IGF1RP08069 1367 aa16.86■□□□□ 0.29
PTMA-202ENST00000409115 SPOCK2Q92563 424 aa16.85■□□□□ 0.29
PTMA-202ENST00000409115 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
PTMA-202ENST00000409115 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.283e-14■□□□□ 9
PTMA-202ENST00000409115 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
PTMA-202ENST00000409115 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
PTMA-202ENST00000409115 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
PTMA-202ENST00000409115 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
PTMA-202ENST00000409115 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
PTMA-202ENST00000409115 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
PTMA-202ENST00000409115 PTPRGP23470 1445 aa16.77■□□□□ 0.27
PTMA-202ENST00000409115 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
PTMA-202ENST00000409115 MAP3K4Q9Y6R4 1608 aa16.75■□□□□ 0.27
PTMA-202ENST00000409115 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
PTMA-202ENST00000409115 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
PTMA-202ENST00000409115 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms