RNA–Protein interactions for RNA: ENST00000403525.5

CAD-202, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 1 (best) BASIC

Gene CAD, Length 6,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-202ENST00000403525 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
CAD-202ENST00000403525 ANP32BQ92688 251 aaKnown RBP18.05■□□□□ 0.48
CAD-202ENST00000403525 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
CAD-202ENST00000403525 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
CAD-202ENST00000403525 RGL3Q3MIN7 710 aa18.02■□□□□ 0.48
CAD-202ENST00000403525 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.48
CAD-202ENST00000403525 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.47
CAD-202ENST00000403525 FKBP8Q14318 412 aa17.98■□□□□ 0.47
CAD-202ENST00000403525 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
CAD-202ENST00000403525 CLIP1P30622 1438 aa17.96■□□□□ 0.47
CAD-202ENST00000403525 CFDP1Q9UEE9 299 aaPredicted RBP17.96■□□□□ 0.47
CAD-202ENST00000403525 NPHP1O15259 732 aa17.95■□□□□ 0.46
CAD-202ENST00000403525 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
CAD-202ENST00000403525 MLECQ14165 292 aa17.91■□□□□ 0.46
CAD-202ENST00000403525 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
CAD-202ENST00000403525 POGKQ9P215 609 aa17.91■□□□□ 0.46
CAD-202ENST00000403525 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
CAD-202ENST00000403525 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
CAD-202ENST00000403525 CCDC136Q96JN2 1154 aa17.88■□□□□ 0.45
CAD-202ENST00000403525 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
CAD-202ENST00000403525 NACADO15069 1562 aa17.87■□□□□ 0.45
CAD-202ENST00000403525 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
CAD-202ENST00000403525 GOLGA3Q08378 1498 aa17.83■□□□□ 0.45
CAD-202ENST00000403525 KIF27Q86VH2 1401 aa17.83■□□□□ 0.44
CAD-202ENST00000403525 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
CAD-202ENST00000403525 LAS1LQ9Y4W2 734 aaKnown RBP17.82■□□□□ 0.44
CAD-202ENST00000403525 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
CAD-202ENST00000403525 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
CAD-202ENST00000403525 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
CAD-202ENST00000403525 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
CAD-202ENST00000403525 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
CAD-202ENST00000403525 KANK1Q14678 1352 aa17.76■□□□□ 0.43
CAD-202ENST00000403525 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
CAD-202ENST00000403525 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
CAD-202ENST00000403525 TNNT2P45379 298 aaPredicted RBP17.72■□□□□ 0.43
CAD-202ENST00000403525 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
CAD-202ENST00000403525 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
CAD-202ENST00000403525 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
CAD-202ENST00000403525 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
CAD-202ENST00000403525 EEA1Q15075 1411 aa17.7■□□□□ 0.42
CAD-202ENST00000403525 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
CAD-202ENST00000403525 SOX12O15370 315 aa17.7■□□□□ 0.42
CAD-202ENST00000403525 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
CAD-202ENST00000403525 FTSJ3Q8IY81 847 aaKnown RBP17.69■□□□□ 0.42
CAD-202ENST00000403525 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
CAD-202ENST00000403525 CASC1Q6TDU7 716 aa17.67■□□□□ 0.42
CAD-202ENST00000403525 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
CAD-202ENST00000403525 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
CAD-202ENST00000403525 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
CAD-202ENST00000403525 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
CAD-202ENST00000403525 OS9Q13438 667 aaPredicted RBP17.63■□□□□ 0.41
CAD-202ENST00000403525 GGT6Q6P531 493 aa17.63■□□□□ 0.41
CAD-202ENST00000403525 SRPK2P78362 688 aaKnown RBP17.62■□□□□ 0.41
CAD-202ENST00000403525 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
CAD-202ENST00000403525 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
CAD-202ENST00000403525 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
CAD-202ENST00000403525 TPRNQ4KMQ1 711 aa17.59■□□□□ 0.41
CAD-202ENST00000403525 NBR1Q14596 966 aa17.59■□□□□ 0.41
CAD-202ENST00000403525 CUX2O14529 1486 aa17.58■□□□□ 0.41
CAD-202ENST00000403525 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
CAD-202ENST00000403525 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
CAD-202ENST00000403525 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
CAD-202ENST00000403525 STK26Q9P289 416 aa17.57■□□□□ 0.4
CAD-202ENST00000403525 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
CAD-202ENST00000403525 BECN1Q14457 450 aa17.56■□□□□ 0.4
CAD-202ENST00000403525 CCDC9Q9Y3X0 531 aaKnown RBP17.55■□□□□ 0.4
CAD-202ENST00000403525 DCAF11Q8TEB1 546 aa17.54■□□□□ 0.4
CAD-202ENST00000403525 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
CAD-202ENST00000403525 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
CAD-202ENST00000403525 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
CAD-202ENST00000403525 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
CAD-202ENST00000403525 TMF1P82094 1093 aa17.52■□□□□ 0.39
CAD-202ENST00000403525 EIF5BO60841 1220 aaKnown RBP17.51■□□□□ 0.39
CAD-202ENST00000403525 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
CAD-202ENST00000403525 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
CAD-202ENST00000403525 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
CAD-202ENST00000403525 MIER1Q8N108 512 aa17.49■□□□□ 0.39
CAD-202ENST00000403525 GOLGA6L22H0YM25 854 aa17.48■□□□□ 0.39
CAD-202ENST00000403525 FGD1P98174 961 aa17.48■□□□□ 0.39
CAD-202ENST00000403525 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
CAD-202ENST00000403525 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
CAD-202ENST00000403525 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
CAD-202ENST00000403525 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
CAD-202ENST00000403525 KCNJ4P48050 445 aa17.46■□□□□ 0.38
CAD-202ENST00000403525 SIN3AQ96ST3 1273 aa17.45■□□□□ 0.38
CAD-202ENST00000403525 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
CAD-202ENST00000403525 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
CAD-202ENST00000403525 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
CAD-202ENST00000403525 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
CAD-202ENST00000403525 CHMP4BQ9H444 224 aaKnown RBP17.44■□□□□ 0.38
CAD-202ENST00000403525 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
CAD-202ENST00000403525 CLSTN1O94985 981 aa17.41■□□□□ 0.38
CAD-202ENST00000403525 EID1Q9Y6B2 187 aa17.4■□□□□ 0.38
CAD-202ENST00000403525 SOGA1O94964 1423 aa17.39■□□□□ 0.38
CAD-202ENST00000403525 MS4A1P11836 297 aa17.39■□□□□ 0.37
CAD-202ENST00000403525 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
CAD-202ENST00000403525 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
CAD-202ENST00000403525 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
CAD-202ENST00000403525 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
CAD-202ENST00000403525 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms