RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 NKX1-1Q15270 411 aaPredicted RBP6.58□□□□□ -1.36
CCDC178-204ENST00000403303 HRCP23327 699 aa6.57□□□□□ -1.36
CCDC178-204ENST00000403303 RNF25Q96BH1 459 aaPredicted RBP6.57□□□□□ -1.36
CCDC178-204ENST00000403303 SAMD1Q6SPF0 538 aaPredicted RBP6.55□□□□□ -1.36
CCDC178-204ENST00000403303 ABCB7O75027 752 aa6.55□□□□□ -1.36
CCDC178-204ENST00000403303 POLA2Q14181 598 aa6.55□□□□□ -1.36
CCDC178-204ENST00000403303 LMOD2Q6P5Q4 547 aa6.55□□□□□ -1.36
CCDC178-204ENST00000403303 UNC13AQ9UPW8 1703 aa6.54□□□□□ -1.36
CCDC178-204ENST00000403303 SPINK5Q9NQ38 1064 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-204ENST00000403303 STK25O00506 426 aa6.52□□□□□ -1.37
CCDC178-204ENST00000403303 GPBP1L1Q9HC44 474 aaPredicted RBP6.52□□□□□ -1.37
CCDC178-204ENST00000403303 SLC24A3Q9HC58 644 aa6.52□□□□□ -1.37
CCDC178-204ENST00000403303 NACADO15069 1562 aa6.51□□□□□ -1.37
CCDC178-204ENST00000403303 KCNV2Q8TDN2 545 aa6.49□□□□□ -1.37
CCDC178-204ENST00000403303 SP7Q8TDD2 431 aaPredicted RBP6.48□□□□□ -1.37
CCDC178-204ENST00000403303 IL27Q8NEV9 243 aa6.46□□□□□ -1.37
CCDC178-204ENST00000403303 PROM2Q8N271 834 aa6.46□□□□□ -1.38
CCDC178-204ENST00000403303 C1orf115Q9H7X2 142 aa6.46□□□□□ -1.38
CCDC178-204ENST00000403303 GTPBP6O43824 516 aaPredicted RBP6.44□□□□□ -1.38
CCDC178-204ENST00000403303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.43□□□□□ -1.38
CCDC178-204ENST00000403303 HNRNPUL2Q1KMD3 747 aaKnown RBP6.43□□□□□ -1.38
CCDC178-204ENST00000403303 ZCCHC6Q5VYS8 1495 aaKnown RBP6.42□□□□□ -1.38
CCDC178-204ENST00000403303 ZNF428Q96B54 188 aa6.42□□□□□ -1.38
CCDC178-204ENST00000403303 CAPN15O75808 1086 aa6.41□□□□□ -1.38
CCDC178-204ENST00000403303 STK24Q9Y6E0 443 aa6.41□□□□□ -1.38
CCDC178-204ENST00000403303 APBB1O00213 710 aa6.41□□□□□ -1.38
CCDC178-204ENST00000403303 SEMA3EO15041 775 aa6.41□□□□□ -1.38
CCDC178-204ENST00000403303 CADPS2Q86UW7 1296 aa6.4□□□□□ -1.38
CCDC178-204ENST00000403303 RB1CC1Q8TDY2 1594 aa6.4□□□□□ -1.38
CCDC178-204ENST00000403303 OSCARQ8IYS5 282 aa6.4□□□□□ -1.39
CCDC178-204ENST00000403303 BCL11BQ9C0K0 894 aaPredicted RBP6.4□□□□□ -1.39
CCDC178-204ENST00000403303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCDC178-204ENST00000403303 PABPN1Q86U42 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCDC178-204ENST00000403303 HS6ST3Q8IZP7 471 aa6.38□□□□□ -1.39
CCDC178-204ENST00000403303 ZNF692Q9BU19 519 aaPredicted RBP6.38□□□□□ -1.39
CCDC178-204ENST00000403303 BICRAQ9NZM4 1560 aa6.37□□□□□ -1.39
CCDC178-204ENST00000403303 NECTIN2Q92692 538 aa6.37□□□□□ -1.39
CCDC178-204ENST00000403303 DNAJC5Q9H3Z4 198 aa6.37□□□□□ -1.39
CCDC178-204ENST00000403303 LOC105371045A0A1W2PR82 267 aa6.36□□□□□ -1.39
CCDC178-204ENST00000403303 ERICH6Q7L0X2 663 aa6.36□□□□□ -1.39
CCDC178-204ENST00000403303 ZC3H15Q8WU90 426 aaKnown RBP6.35□□□□□ -1.39
CCDC178-204ENST00000403303 AEBP1Q8IUX7 1158 aa6.34□□□□□ -1.39
CCDC178-204ENST00000403303 DCAF8Q5TAQ9 597 aa6.33□□□□□ -1.4
CCDC178-204ENST00000403303 WDR70Q9NW82 654 aa6.33□□□□□ -1.4
CCDC178-204ENST00000403303 MKRN3Q13064 507 aaKnown RBP6.32□□□□□ -1.4
CCDC178-204ENST00000403303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
CCDC178-204ENST00000403303 PYGBP11216 843 aa6.31□□□□□ -1.4
CCDC178-204ENST00000403303 ZFP91Q96JP5 570 aaPredicted RBP6.31□□□□□ -1.4
CCDC178-204ENST00000403303 FOXD4L5Q5VV16 416 aaPredicted RBP6.3□□□□□ -1.4
CCDC178-204ENST00000403303 FOXD4L4Q8WXT5 416 aaPredicted RBP6.3□□□□□ -1.4
CCDC178-204ENST00000403303 DSG3P32926 999 aa6.29□□□□□ -1.4
CCDC178-204ENST00000403303 RSPH6AQ9H0K4 717 aa6.29□□□□□ -1.4
CCDC178-204ENST00000403303 CCDC82Q8N4S0 544 aa6.28□□□□□ -1.4
CCDC178-204ENST00000403303 CLUAP1Q96AJ1 413 aa6.28□□□□□ -1.4
CCDC178-204ENST00000403303 PLSCR2Q9NRY7 297 aa6.27□□□□□ -1.4
CCDC178-204ENST00000403303 ZMYND15Q9H091 742 aa6.27□□□□□ -1.41
CCDC178-204ENST00000403303 IGSF3O75054 1194 aa6.27□□□□□ -1.41
CCDC178-204ENST00000403303 KCTD17Q8N5Z5 321 aa6.26□□□□□ -1.41
CCDC178-204ENST00000403303 P3H3Q8IVL6 736 aa6.26□□□□□ -1.41
CCDC178-204ENST00000403303 RAD21O60216 631 aa6.26□□□□□ -1.41
CCDC178-204ENST00000403303 PDIA4P13667 645 aaKnown RBP6.26□□□□□ -1.41
CCDC178-204ENST00000403303 RIOK3O14730 519 aaKnown RBP6.25□□□□□ -1.41
CCDC178-204ENST00000403303 ZBTB7CA1YPR0 619 aa6.24□□□□□ -1.41
CCDC178-204ENST00000403303 RBM25P49756 843 aaKnown RBP6.24□□□□□ -1.41
CCDC178-204ENST00000403303 ATP1B4Q9UN42 357 aaPredicted RBP6.24□□□□□ -1.41
CCDC178-204ENST00000403303 RBM42Q9BTD8 480 aaKnown RBP6.24□□□□□ -1.41
CCDC178-204ENST00000403303 CCDC9Q9Y3X0 531 aaKnown RBP6.24□□□□□ -1.41
CCDC178-204ENST00000403303 RBM26Q5T8P6 1007 aaKnown RBP6.23□□□□□ -1.41
CCDC178-204ENST00000403303 CHRDL2Q6WN34 429 aa6.23□□□□□ -1.41
CCDC178-204ENST00000403303 KRI1Q8N9T8 703 aaKnown RBP6.23□□□□□ -1.41
CCDC178-204ENST00000403303 PLEKHG5O94827 1062 aa6.21□□□□□ -1.42
CCDC178-204ENST00000403303 FAM117AQ9C073 453 aa6.21□□□□□ -1.42
CCDC178-204ENST00000403303 PEG3Q9GZU2 1588 aa6.21□□□□□ -1.42
CCDC178-204ENST00000403303 KDM4CQ9H3R0 1056 aa6.2□□□□□ -1.42
CCDC178-204ENST00000403303 ZNF777Q9ULD5 760 aaPredicted RBP6.2□□□□□ -1.42
CCDC178-204ENST00000403303 CARNS1A5YM72 827 aa6.18□□□□□ -1.42
CCDC178-204ENST00000403303 MTMR7Q9Y216 660 aa6.18□□□□□ -1.42
CCDC178-204ENST00000403303 MYT1LQ9UL68 1186 aa6.18□□□□□ -1.42
CCDC178-204ENST00000403303 PPP1R37O75864 691 aa6.17□□□□□ -1.42
CCDC178-204ENST00000403303 MLLT3P42568 568 aaPredicted RBP6.17□□□□□ -1.42
CCDC178-204ENST00000403303 ABCC9O60706 1549 aa6.16□□□□□ -1.42
CCDC178-204ENST00000403303 RASEFQ8IZ41 740 aa6.15□□□□□ -1.42
CCDC178-204ENST00000403303 CLEC11AQ9Y240 323 aa6.15□□□□□ -1.42
CCDC178-204ENST00000403303 ZNF316A6NFI3 1004 aaPredicted RBP6.15□□□□□ -1.43
CCDC178-204ENST00000403303 STAG3Q9UJ98 1225 aa6.14□□□□□ -1.43
CCDC178-204ENST00000403303 VGFO15240 615 aaPredicted RBP6.13□□□□□ -1.43
CCDC178-204ENST00000403303 PCDHB8Q9UN66 801 aa6.12□□□□□ -1.43
CCDC178-204ENST00000403303 PCDHB13Q9Y5F0 798 aa6.12□□□□□ -1.43
CCDC178-204ENST00000403303 PRDM2Q13029 1718 aa6.12□□□□□ -1.43
CCDC178-204ENST00000403303 E2F4Q16254 413 aa6.12□□□□□ -1.43
CCDC178-204ENST00000403303 POM121Q96HA1 1249 aa6.1□□□□□ -1.43
CCDC178-204ENST00000403303 GZF1Q9H116 711 aaPredicted RBP6.1□□□□□ -1.43
CCDC178-204ENST00000403303 USP35Q9P2H5 1018 aa6.1□□□□□ -1.43
CCDC178-204ENST00000403303 NUBP1P53384 320 aa6.1□□□□□ -1.43
CCDC178-204ENST00000403303 TSPYL2Q9H2G4 693 aaPredicted RBP6.1□□□□□ -1.43
CCDC178-204ENST00000403303 ZMYND10O75800 440 aa6.1□□□□□ -1.43
CCDC178-204ENST00000403303 FAM212AQ96EL1 285 aa6.1□□□□□ -1.43
CCDC178-204ENST00000403303 LARP6Q9BRS8 491 aaKnown RBP6.09□□□□□ -1.43
CCDC178-204ENST00000403303 PDE4DQ08499 809 aa6.09□□□□□ -1.43
CCDC178-204ENST00000403303 GPIHBP1Q8IV16 184 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms