RNA–Protein interactions for RNA: ENST00000400866.4

ATRX-203, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-203ENST00000400866 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
ATRX-203ENST00000400866 C7P10643 843 aa15.22■□□□□ 0.03
ATRX-203ENST00000400866 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
ATRX-203ENST00000400866 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
ATRX-203ENST00000400866 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
ATRX-203ENST00000400866 MAMSTRQ6ZN01 415 aa15.18■□□□□ 0.02
ATRX-203ENST00000400866 ATMINO43313 823 aaPredicted RBP15.17■□□□□ 0.02
ATRX-203ENST00000400866 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
ATRX-203ENST00000400866 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
ATRX-203ENST00000400866 PROM2Q8N271 834 aa15.12■□□□□ 0.01
ATRX-203ENST00000400866 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
ATRX-203ENST00000400866 SCUBE2Q9NQ36 999 aa15.04■□□□□ -0
ATRX-203ENST00000400866 KIF12Q96FN5 646 aa15.02■□□□□ -0
ATRX-203ENST00000400866 ATN1P54259 1190 aaPredicted RBP15.01□□□□□ -0.01
ATRX-203ENST00000400866 MIER1Q8N108 512 aa15.01□□□□□ -0.01
ATRX-203ENST00000400866 POTEJP0CG39 1038 aa14.97□□□□□ -0.01
ATRX-203ENST00000400866 TIE1P35590 1138 aa14.94□□□□□ -0.02
ATRX-203ENST00000400866 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
ATRX-203ENST00000400866 BMP2KQ9NSY1 1161 aaPredicted RBP14.92□□□□□ -0.02
ATRX-203ENST00000400866 MAP3K13O43283 966 aa14.91□□□□□ -0.02
ATRX-203ENST00000400866 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
ATRX-203ENST00000400866 SEC24BO95487 1268 aa14.86□□□□□ -0.03
ATRX-203ENST00000400866 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
ATRX-203ENST00000400866 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
ATRX-203ENST00000400866 LCE2DQ5TA82 110 aaPredicted RBP14.84□□□□□ -0.03
ATRX-203ENST00000400866 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
ATRX-203ENST00000400866 TRPC6Q9Y210 931 aa14.82□□□□□ -0.04
ATRX-203ENST00000400866 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
ATRX-203ENST00000400866 TTLL13PA6NNM8 815 aa14.79□□□□□ -0.04
ATRX-203ENST00000400866 IER5LQ5T953 404 aa14.77□□□□□ -0.05
ATRX-203ENST00000400866 PCDHB13Q9Y5F0 798 aa14.76□□□□□ -0.05
ATRX-203ENST00000400866 TRIM35Q9UPQ4 493 aa14.72□□□□□ -0.05
ATRX-203ENST00000400866 COLQQ9Y215 455 aaPredicted RBP14.71□□□□□ -0.05
ATRX-203ENST00000400866 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
ATRX-203ENST00000400866 NUBP1P53384 320 aa14.65□□□□□ -0.06
ATRX-203ENST00000400866 CDAN1Q8IWY9 1227 aa14.63□□□□□ -0.07
ATRX-203ENST00000400866 IFNL1Q8IU54 200 aa14.61□□□□□ -0.07
ATRX-203ENST00000400866 PLCG2P16885 1265 aa14.6□□□□□ -0.07
ATRX-203ENST00000400866 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
ATRX-203ENST00000400866 SLAIN1Q8ND83 568 aa14.58□□□□□ -0.08
ATRX-203ENST00000400866 RTN4Q9NQC3 1192 aaKnown RBP14.51□□□□□ -0.09
ATRX-203ENST00000400866 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
ATRX-203ENST00000400866 DCAF8Q5TAQ9 597 aa14.48□□□□□ -0.09
ATRX-203ENST00000400866 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
ATRX-203ENST00000400866 ST18O60284 1047 aa14.46□□□□□ -0.09
ATRX-203ENST00000400866 IRX5P78411 483 aaPredicted RBP14.46□□□□□ -0.09
ATRX-203ENST00000400866 OCEL1Q9H607 264 aa14.45□□□□□ -0.1
ATRX-203ENST00000400866 SNPHO15079 494 aa14.43□□□□□ -0.1
ATRX-203ENST00000400866 TMEM121BQ9BXQ6 578 aaPredicted RBP14.4□□□□□ -0.1
ATRX-203ENST00000400866 PYGBP11216 843 aa14.39□□□□□ -0.11
ATRX-203ENST00000400866 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
ATRX-203ENST00000400866 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
ATRX-203ENST00000400866 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
ATRX-203ENST00000400866 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
ATRX-203ENST00000400866 MMRN1Q13201 1228 aa14.3□□□□□ -0.12
ATRX-203ENST00000400866 GSE1Q14687 1217 aa14.29□□□□□ -0.12
ATRX-203ENST00000400866 ZNF467Q7Z7K2 595 aaPredicted RBP14.29□□□□□ -0.12
ATRX-203ENST00000400866 SPNS2Q8IVW8 549 aa14.28□□□□□ -0.12
ATRX-203ENST00000400866 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
ATRX-203ENST00000400866 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
ATRX-203ENST00000400866 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
ATRX-203ENST00000400866 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
ATRX-203ENST00000400866 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
ATRX-203ENST00000400866 CHRM1P11229 460 aaPredicted RBP14.16□□□□□ -0.14
ATRX-203ENST00000400866 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
ATRX-203ENST00000400866 MARVELD3Q96A59 401 aa14.16□□□□□ -0.14
ATRX-203ENST00000400866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.151e-8■■■■■ 27.1
ATRX-203ENST00000400866 EMP3P54852 163 aa14.11□□□□□ -0.15
ATRX-203ENST00000400866 PSEN1P49768 467 aa14.1□□□□□ -0.15
ATRX-203ENST00000400866 G3V3G9 751 aa14.06□□□□□ -0.16
ATRX-203ENST00000400866 PDAP1Q13442 181 aaKnown RBP14.04□□□□□ -0.16
ATRX-203ENST00000400866 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
ATRX-203ENST00000400866 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
ATRX-203ENST00000400866 ILDR1Q86SU0 546 aaPredicted RBP13.96□□□□□ -0.17
ATRX-203ENST00000400866 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
ATRX-203ENST00000400866 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
ATRX-203ENST00000400866 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
ATRX-203ENST00000400866 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
ATRX-203ENST00000400866 KRTAP3-3Q9BYR6 98 aa13.91□□□□□ -0.18
ATRX-203ENST00000400866 KRTAP3-2Q9BYR7 98 aa13.91□□□□□ -0.18
ATRX-203ENST00000400866 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
ATRX-203ENST00000400866 DPY19L2Q6NUT2 758 aa13.88□□□□□ -0.19
ATRX-203ENST00000400866 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
ATRX-203ENST00000400866 POTEB3A0JP26 581 aa13.84□□□□□ -0.19
ATRX-203ENST00000400866 POTEBQ6S5H4 581 aa13.84□□□□□ -0.19
ATRX-203ENST00000400866 PKD2Q13563 968 aa13.83□□□□□ -0.2
ATRX-203ENST00000400866 RIMBP2O15034 1052 aa13.81□□□□□ -0.2
ATRX-203ENST00000400866 HOXB1P14653 301 aaPredicted RBP13.81□□□□□ -0.2
ATRX-203ENST00000400866 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
ATRX-203ENST00000400866 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
ATRX-203ENST00000400866 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
ATRX-203ENST00000400866 ERBB3P21860 1342 aa13.79□□□□□ -0.2
ATRX-203ENST00000400866 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
ATRX-203ENST00000400866 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
ATRX-203ENST00000400866 EFCAB3Q8N7B9 438 aa13.69□□□□□ -0.22
ATRX-203ENST00000400866 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
ATRX-203ENST00000400866 RNF166Q96A37 237 aaPredicted RBP13.65□□□□□ -0.22
ATRX-203ENST00000400866 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
ATRX-203ENST00000400866 SOX12O15370 315 aa13.62□□□□□ -0.23
ATRX-203ENST00000400866 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms