RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
RUNX3-203ENST00000399916 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
RUNX3-203ENST00000399916 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
RUNX3-203ENST00000399916 CLIP1P30622 1438 aa18.92■□□□□ 0.62
RUNX3-203ENST00000399916 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
RUNX3-203ENST00000399916 IL27Q8NEV9 243 aa18.87■□□□□ 0.61
RUNX3-203ENST00000399916 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
RUNX3-203ENST00000399916 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
RUNX3-203ENST00000399916 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
RUNX3-203ENST00000399916 PKNOX2Q96KN3 472 aa18.83■□□□□ 0.61
RUNX3-203ENST00000399916 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
RUNX3-203ENST00000399916 B4GALNT3Q6L9W6 998 aa18.81■□□□□ 0.6
RUNX3-203ENST00000399916 EEA1Q15075 1411 aa18.8■□□□□ 0.6
RUNX3-203ENST00000399916 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
RUNX3-203ENST00000399916 ERICH6BQ5W0A0 696 aa18.76■□□□□ 0.59
RUNX3-203ENST00000399916 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
RUNX3-203ENST00000399916 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
RUNX3-203ENST00000399916 FAM9BQ8IZU0 186 aa18.75■□□□□ 0.59
RUNX3-203ENST00000399916 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
RUNX3-203ENST00000399916 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
RUNX3-203ENST00000399916 FAM50AQ14320 339 aaKnown RBP18.73■□□□□ 0.59
RUNX3-203ENST00000399916 A0A0U1RQG5 324 aaPredicted RBP18.71■□□□□ 0.59
RUNX3-203ENST00000399916 PODXL2Q9NZ53 605 aa18.7■□□□□ 0.58
RUNX3-203ENST00000399916 MSH5O43196 834 aa18.69■□□□□ 0.58
RUNX3-203ENST00000399916 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
RUNX3-203ENST00000399916 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
RUNX3-203ENST00000399916 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
RUNX3-203ENST00000399916 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
RUNX3-203ENST00000399916 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
RUNX3-203ENST00000399916 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
RUNX3-203ENST00000399916 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
RUNX3-203ENST00000399916 UBE2Q2Q8WVN8 375 aa18.57■□□□□ 0.56
RUNX3-203ENST00000399916 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
RUNX3-203ENST00000399916 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
RUNX3-203ENST00000399916 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
RUNX3-203ENST00000399916 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
RUNX3-203ENST00000399916 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
RUNX3-203ENST00000399916 ARID3AQ99856 593 aa18.5■□□□□ 0.55
RUNX3-203ENST00000399916 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
RUNX3-203ENST00000399916 FBLN2P98095 1184 aa18.48■□□□□ 0.55
RUNX3-203ENST00000399916 PPM1GO15355 546 aaPredicted RBP18.48■□□□□ 0.55
RUNX3-203ENST00000399916 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
RUNX3-203ENST00000399916 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
RUNX3-203ENST00000399916 BRPF3Q9ULD4 1205 aa18.48■□□□□ 0.55
RUNX3-203ENST00000399916 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
RUNX3-203ENST00000399916 HSP90AA2PQ14568 343 aaPredicted RBP18.42■□□□□ 0.54
RUNX3-203ENST00000399916 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
RUNX3-203ENST00000399916 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
RUNX3-203ENST00000399916 IPO9Q96P70 1041 aaKnown RBP18.42■□□□□ 0.54
RUNX3-203ENST00000399916 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
RUNX3-203ENST00000399916 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.54
RUNX3-203ENST00000399916 NESP48681 1621 aa18.38■□□□□ 0.53
RUNX3-203ENST00000399916 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
RUNX3-203ENST00000399916 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
RUNX3-203ENST00000399916 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
RUNX3-203ENST00000399916 KIF21BO75037 1637 aa18.34■□□□□ 0.53
RUNX3-203ENST00000399916 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.52
RUNX3-203ENST00000399916 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
RUNX3-203ENST00000399916 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
RUNX3-203ENST00000399916 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
RUNX3-203ENST00000399916 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
RUNX3-203ENST00000399916 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
RUNX3-203ENST00000399916 CFTRP13569 1480 aa18.28■□□□□ 0.52
RUNX3-203ENST00000399916 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.52
RUNX3-203ENST00000399916 GSE1Q14687 1217 aa18.25■□□□□ 0.51
RUNX3-203ENST00000399916 ZMYND15Q9H091 742 aa18.25■□□□□ 0.51
RUNX3-203ENST00000399916 DDRGK1Q96HY6 314 aa18.24■□□□□ 0.51
RUNX3-203ENST00000399916 ANP32BQ92688 251 aaKnown RBP18.22■□□□□ 0.51
RUNX3-203ENST00000399916 SETD5Q9C0A6 1442 aa18.21■□□□□ 0.5
RUNX3-203ENST00000399916 GZF1Q9H116 711 aaPredicted RBP18.19■□□□□ 0.5
RUNX3-203ENST00000399916 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
RUNX3-203ENST00000399916 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
RUNX3-203ENST00000399916 PPP1R15AO75807 674 aaPredicted RBP18.17■□□□□ 0.5
RUNX3-203ENST00000399916 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
RUNX3-203ENST00000399916 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
RUNX3-203ENST00000399916 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
RUNX3-203ENST00000399916 TNNT2P45379 298 aaPredicted RBP18.15■□□□□ 0.5
RUNX3-203ENST00000399916 CHIC2Q9UKJ5 165 aa18.14■□□□□ 0.5
RUNX3-203ENST00000399916 CUX2O14529 1486 aa18.14■□□□□ 0.49
RUNX3-203ENST00000399916 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
RUNX3-203ENST00000399916 RGS3P49796 1198 aa18.11■□□□□ 0.49
RUNX3-203ENST00000399916 ARID3CA6NKF2 412 aa18.11■□□□□ 0.49
RUNX3-203ENST00000399916 CDK11BP21127 795 aaKnown RBP18.1■□□□□ 0.49
RUNX3-203ENST00000399916 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
RUNX3-203ENST00000399916 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
RUNX3-203ENST00000399916 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
RUNX3-203ENST00000399916 SLKQ9H2G2 1235 aaPredicted RBP18.08■□□□□ 0.48
RUNX3-203ENST00000399916 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
RUNX3-203ENST00000399916 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
RUNX3-203ENST00000399916 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
RUNX3-203ENST00000399916 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
RUNX3-203ENST00000399916 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
RUNX3-203ENST00000399916 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
RUNX3-203ENST00000399916 FGD5Q6ZNL6 1462 aa18.02■□□□□ 0.48
RUNX3-203ENST00000399916 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.47
RUNX3-203ENST00000399916 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
RUNX3-203ENST00000399916 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
RUNX3-203ENST00000399916 EIF4G2P78344 907 aaKnown RBP eCLIP18■□□□□ 0.47
RUNX3-203ENST00000399916 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
RUNX3-203ENST00000399916 L1TD1Q5T7N2 865 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms