RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 ANP32AP39687 249 aaKnown RBP24.76■■□□□ 1.55
MSL1-202ENST00000398532 IRX6P78412 446 aaPredicted RBP24.74■■□□□ 1.55
MSL1-202ENST00000398532 NPM2Q86SE8 214 aaKnown RBP24.73■■□□□ 1.55
MSL1-202ENST00000398532 CCNB3Q8WWL7 1395 aa24.71■■□□□ 1.55
MSL1-202ENST00000398532 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
MSL1-202ENST00000398532 VPS8Q8N3P4 1428 aa24.68■■□□□ 1.54
MSL1-202ENST00000398532 WIZO95785 1651 aa24.67■■□□□ 1.54
MSL1-202ENST00000398532 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
MSL1-202ENST00000398532 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
MSL1-202ENST00000398532 CCDC136Q96JN2 1154 aa24.64■■□□□ 1.54
MSL1-202ENST00000398532 CUX2O14529 1486 aa24.64■■□□□ 1.54
MSL1-202ENST00000398532 NEFMP07197 916 aa24.64■■□□□ 1.53
MSL1-202ENST00000398532 ZBTB47Q9UFB7 747 aaPredicted RBP24.62■■□□□ 1.53
MSL1-202ENST00000398532 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
MSL1-202ENST00000398532 CFDP1Q9UEE9 299 aaPredicted RBP24.59■■□□□ 1.53
MSL1-202ENST00000398532 NPM1P06748 294 aaKnown RBP eCLIP24.56■■□□□ 1.52
MSL1-202ENST00000398532 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
MSL1-202ENST00000398532 KCNH8Q96L42 1107 aa24.54■■□□□ 1.52
MSL1-202ENST00000398532 RGL3Q3MIN7 710 aa24.53■■□□□ 1.52
MSL1-202ENST00000398532 SENP3-EIF4A1A0A087X0R7 540 aa24.52■■□□□ 1.52
MSL1-202ENST00000398532 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
MSL1-202ENST00000398532 SLC24A1O60721 1099 aa24.51■■□□□ 1.51
MSL1-202ENST00000398532 STAG3Q9UJ98 1225 aa24.47■■□□□ 1.51
MSL1-202ENST00000398532 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
MSL1-202ENST00000398532 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
MSL1-202ENST00000398532 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
MSL1-202ENST00000398532 ESF1Q9H501 851 aaKnown RBP24.4■■□□□ 1.5
MSL1-202ENST00000398532 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.5
MSL1-202ENST00000398532 SETD5Q9C0A6 1442 aa24.39■■□□□ 1.49
MSL1-202ENST00000398532 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
MSL1-202ENST00000398532 TIMELESSQ9UNS1 1208 aa24.37■■□□□ 1.49
MSL1-202ENST00000398532 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.34■■□□□ 1.49
MSL1-202ENST00000398532 RAPGEF2Q9Y4G8 1499 aa24.34■■□□□ 1.49
MSL1-202ENST00000398532 RAB3GAP2Q9H2M9 1393 aa24.33■■□□□ 1.49
MSL1-202ENST00000398532 NBR1Q14596 966 aa24.31■■□□□ 1.48
MSL1-202ENST00000398532 EIF4G1Q04637 1599 aaKnown RBP24.28■■□□□ 1.48
MSL1-202ENST00000398532 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
MSL1-202ENST00000398532 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
MSL1-202ENST00000398532 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
MSL1-202ENST00000398532 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
MSL1-202ENST00000398532 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
MSL1-202ENST00000398532 UPF2Q9HAU5 1272 aaKnown RBP24.24■■□□□ 1.47
MSL1-202ENST00000398532 PLPPR3Q6T4P5 718 aa24.24■■□□□ 1.47
MSL1-202ENST00000398532 FOXD1Q16676 465 aa24.22■■□□□ 1.47
MSL1-202ENST00000398532 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
MSL1-202ENST00000398532 KNSTRNQ9Y448 316 aa24.17■■□□□ 1.46
MSL1-202ENST00000398532 CCER2I3L3R5 266 aa24.16■■□□□ 1.46
MSL1-202ENST00000398532 DCAF11Q8TEB1 546 aa24.15■■□□□ 1.46
MSL1-202ENST00000398532 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
MSL1-202ENST00000398532 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
MSL1-202ENST00000398532 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.46
MSL1-202ENST00000398532 HSP90AA1P07900 732 aaKnown RBP24.14■■□□□ 1.46
MSL1-202ENST00000398532 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
MSL1-202ENST00000398532 PPP4R2Q9NY27 417 aa24.12■■□□□ 1.45
MSL1-202ENST00000398532 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
MSL1-202ENST00000398532 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
MSL1-202ENST00000398532 MPHOSPH9Q99550 1183 aa24.08■■□□□ 1.45
MSL1-202ENST00000398532 PKD2Q13563 968 aa24.08■■□□□ 1.45
MSL1-202ENST00000398532 B4GALNT3Q6L9W6 998 aa24.08■■□□□ 1.45
MSL1-202ENST00000398532 DHX57Q6P158 1386 aaKnown RBP24.07■■□□□ 1.44
MSL1-202ENST00000398532 CC2D1BQ5T0F9 858 aaKnown RBP24.06■■□□□ 1.44
MSL1-202ENST00000398532 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
MSL1-202ENST00000398532 ANP32EQ9BTT0 268 aa24.02■■□□□ 1.44
MSL1-202ENST00000398532 NEUROD2Q15784 382 aa24■■□□□ 1.43
MSL1-202ENST00000398532 L3MBTL2Q969R5 705 aa23.97■■□□□ 1.43
MSL1-202ENST00000398532 CFAP53Q96M91 514 aa23.95■■□□□ 1.42
MSL1-202ENST00000398532 TMF1P82094 1093 aa23.93■■□□□ 1.42
MSL1-202ENST00000398532 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
MSL1-202ENST00000398532 ARXQ96QS3 562 aa23.91■■□□□ 1.42
MSL1-202ENST00000398532 NUP155O75694 1391 aa23.9■■□□□ 1.42
MSL1-202ENST00000398532 PPM1GO15355 546 aaPredicted RBP23.89■■□□□ 1.41
MSL1-202ENST00000398532 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
MSL1-202ENST00000398532 EIF5BO60841 1220 aaKnown RBP23.86■■□□□ 1.41
MSL1-202ENST00000398532 DDRGK1Q96HY6 314 aa23.85■■□□□ 1.41
MSL1-202ENST00000398532 RBM19Q9Y4C8 960 aaKnown RBP23.85■■□□□ 1.41
MSL1-202ENST00000398532 IGF1RP08069 1367 aa23.85■■□□□ 1.41
MSL1-202ENST00000398532 ANP32BQ92688 251 aaKnown RBP23.84■■□□□ 1.41
MSL1-202ENST00000398532 RGS3P49796 1198 aa23.84■■□□□ 1.41
MSL1-202ENST00000398532 MYH16Q9H6N6 1097 aa23.82■■□□□ 1.4
MSL1-202ENST00000398532 FRAT1Q92837 279 aaPredicted RBP23.81■■□□□ 1.4
MSL1-202ENST00000398532 ANKRD30AQ9BXX3 1397 aa23.81■■□□□ 1.4
MSL1-202ENST00000398532 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
MSL1-202ENST00000398532 POGKQ9P215 609 aa23.77■■□□□ 1.4
MSL1-202ENST00000398532 FTSJ3Q8IY81 847 aaKnown RBP23.77■■□□□ 1.4
MSL1-202ENST00000398532 HNRNPMP52272 730 aaKnown RBP eCLIP23.76■■□□□ 1.39
MSL1-202ENST00000398532 BECN1Q14457 450 aa23.76■■□□□ 1.39
MSL1-202ENST00000398532 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
MSL1-202ENST00000398532 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
MSL1-202ENST00000398532 MAPK8IP3Q9UPT6 1336 aa23.74■■□□□ 1.39
MSL1-202ENST00000398532 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
MSL1-202ENST00000398532 NOP58Q9Y2X3 529 aaKnown RBP23.73■■□□□ 1.39
MSL1-202ENST00000398532 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
MSL1-202ENST00000398532 LAS1LQ9Y4W2 734 aaKnown RBP23.73■■□□□ 1.39
MSL1-202ENST00000398532 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
MSL1-202ENST00000398532 KTN1Q86UP2 1357 aaKnown RBP23.72■■□□□ 1.39
MSL1-202ENST00000398532 KANK1Q14678 1352 aa23.72■■□□□ 1.39
MSL1-202ENST00000398532 KIF21BO75037 1637 aa23.72■■□□□ 1.39
MSL1-202ENST00000398532 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
MSL1-202ENST00000398532 C14orf37Q86TY3 774 aa23.71■■□□□ 1.39
MSL1-202ENST00000398532 CCDC18Q5T9S5 1454 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms