RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 NOP58Q9Y2X3 529 aaKnown RBP19.2■□□□□ 0.66
SH3KBP1-205ENST00000397821 DDRGK1Q96HY6 314 aa19.2■□□□□ 0.66
SH3KBP1-205ENST00000397821 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
SH3KBP1-205ENST00000397821 B4GALNT3Q6L9W6 998 aa19.16■□□□□ 0.66
SH3KBP1-205ENST00000397821 WDR43Q15061 677 aaKnown RBP eCLIP19.16■□□□□ 0.66
SH3KBP1-205ENST00000397821 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
SH3KBP1-205ENST00000397821 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
SH3KBP1-205ENST00000397821 DEKP35659 375 aaKnown RBP19.15■□□□□ 0.66
SH3KBP1-205ENST00000397821 TSHZ2Q9NRE2 1034 aa19.13■□□□□ 0.65
SH3KBP1-205ENST00000397821 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
SH3KBP1-205ENST00000397821 ERICH6BQ5W0A0 696 aa19.09■□□□□ 0.65
SH3KBP1-205ENST00000397821 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
SH3KBP1-205ENST00000397821 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
SH3KBP1-205ENST00000397821 BECN1Q14457 450 aa19.08■□□□□ 0.65
SH3KBP1-205ENST00000397821 GOLGA3Q08378 1498 aa19.08■□□□□ 0.65
SH3KBP1-205ENST00000397821 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.65
SH3KBP1-205ENST00000397821 TRIM44Q96DX7 344 aaPredicted RBP19.07■□□□□ 0.64
SH3KBP1-205ENST00000397821 EEA1Q15075 1411 aa19.05■□□□□ 0.64
SH3KBP1-205ENST00000397821 CHGAP10645 457 aaKnown RBP19■□□□□ 0.63
SH3KBP1-205ENST00000397821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.633e-10■■□□□ 12.8
SH3KBP1-205ENST00000397821 NAP1L5Q96NT1 182 aaPredicted RBP18.96■□□□□ 0.63
SH3KBP1-205ENST00000397821 RGS3P49796 1198 aa18.95■□□□□ 0.62
SH3KBP1-205ENST00000397821 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
SH3KBP1-205ENST00000397821 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
SH3KBP1-205ENST00000397821 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
SH3KBP1-205ENST00000397821 GOLGA6L22H0YM25 854 aa18.88■□□□□ 0.61
SH3KBP1-205ENST00000397821 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SH3KBP1-205ENST00000397821 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
SH3KBP1-205ENST00000397821 NCLP19338 710 aaKnown RBP18.85■□□□□ 0.61
SH3KBP1-205ENST00000397821 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
SH3KBP1-205ENST00000397821 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.61
SH3KBP1-205ENST00000397821 RGL3Q3MIN7 710 aa18.83■□□□□ 0.6
SH3KBP1-205ENST00000397821 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
SH3KBP1-205ENST00000397821 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
SH3KBP1-205ENST00000397821 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
SH3KBP1-205ENST00000397821 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
SH3KBP1-205ENST00000397821 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
SH3KBP1-205ENST00000397821 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
SH3KBP1-205ENST00000397821 TNNT2P45379 298 aaPredicted RBP18.77■□□□□ 0.6
SH3KBP1-205ENST00000397821 DNTTIP2Q5QJE6 756 aaKnown RBP18.76■□□□□ 0.59
SH3KBP1-205ENST00000397821 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
SH3KBP1-205ENST00000397821 NEUROD2Q15784 382 aa18.75■□□□□ 0.59
SH3KBP1-205ENST00000397821 SOGA1O94964 1423 aa18.73■□□□□ 0.59
SH3KBP1-205ENST00000397821 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
SH3KBP1-205ENST00000397821 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
SH3KBP1-205ENST00000397821 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
SH3KBP1-205ENST00000397821 FTSJ3Q8IY81 847 aaKnown RBP18.7■□□□□ 0.58
SH3KBP1-205ENST00000397821 HSPA5P11021 654 aaKnown RBP18.7■□□□□ 0.58
SH3KBP1-205ENST00000397821 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
SH3KBP1-205ENST00000397821 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
SH3KBP1-205ENST00000397821 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
SH3KBP1-205ENST00000397821 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
SH3KBP1-205ENST00000397821 L1TD1Q5T7N2 865 aaKnown RBP18.67■□□□□ 0.58
SH3KBP1-205ENST00000397821 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
SH3KBP1-205ENST00000397821 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
SH3KBP1-205ENST00000397821 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
SH3KBP1-205ENST00000397821 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.58
SH3KBP1-205ENST00000397821 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
SH3KBP1-205ENST00000397821 TCERG1O14776 1098 aaKnown RBP18.63■□□□□ 0.57
SH3KBP1-205ENST00000397821 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
SH3KBP1-205ENST00000397821 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
SH3KBP1-205ENST00000397821 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
SH3KBP1-205ENST00000397821 HSP90AB1P08238 724 aaKnown RBP18.62■□□□□ 0.57
SH3KBP1-205ENST00000397821 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
SH3KBP1-205ENST00000397821 CFDP1Q9UEE9 299 aaPredicted RBP18.6■□□□□ 0.57
SH3KBP1-205ENST00000397821 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
SH3KBP1-205ENST00000397821 PLCB2Q00722 1185 aa18.59■□□□□ 0.57
SH3KBP1-205ENST00000397821 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
SH3KBP1-205ENST00000397821 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
SH3KBP1-205ENST00000397821 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.57
SH3KBP1-205ENST00000397821 PNNQ9H307 717 aaKnown RBP18.58■□□□□ 0.56
SH3KBP1-205ENST00000397821 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
SH3KBP1-205ENST00000397821 HSCBQ8IWL3 235 aa18.56■□□□□ 0.56
SH3KBP1-205ENST00000397821 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
SH3KBP1-205ENST00000397821 MSNP26038 577 aaKnown RBP18.54■□□□□ 0.56
SH3KBP1-205ENST00000397821 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
SH3KBP1-205ENST00000397821 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
SH3KBP1-205ENST00000397821 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.56
SH3KBP1-205ENST00000397821 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.56
SH3KBP1-205ENST00000397821 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
SH3KBP1-205ENST00000397821 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
SH3KBP1-205ENST00000397821 FOXD1Q16676 465 aa18.5■□□□□ 0.55
SH3KBP1-205ENST00000397821 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
SH3KBP1-205ENST00000397821 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
SH3KBP1-205ENST00000397821 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
SH3KBP1-205ENST00000397821 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
SH3KBP1-205ENST00000397821 MS4A1P11836 297 aa18.46■□□□□ 0.55
SH3KBP1-205ENST00000397821 TMF1P82094 1093 aa18.45■□□□□ 0.54
SH3KBP1-205ENST00000397821 USP35Q9P2H5 1018 aa18.45■□□□□ 0.54
SH3KBP1-205ENST00000397821 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
SH3KBP1-205ENST00000397821 ZRSR1Q15695 479 aaKnown RBP18.44■□□□□ 0.54
SH3KBP1-205ENST00000397821 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
SH3KBP1-205ENST00000397821 ARID3AQ99856 593 aa18.42■□□□□ 0.54
SH3KBP1-205ENST00000397821 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
SH3KBP1-205ENST00000397821 WIZO95785 1651 aa18.41■□□□□ 0.54
SH3KBP1-205ENST00000397821 GOLGA6L3A6NEY3 463 aa18.41■□□□□ 0.54
SH3KBP1-205ENST00000397821 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
SH3KBP1-205ENST00000397821 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
SH3KBP1-205ENST00000397821 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
SH3KBP1-205ENST00000397821 PDE4AP27815 886 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms