RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 MTUS2Q5JR59 1369 aa19.24■□□□□ 0.67
TRAK1-203ENST00000396175 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
TRAK1-203ENST00000396175 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
TRAK1-203ENST00000396175 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
TRAK1-203ENST00000396175 TRIM44Q96DX7 344 aaPredicted RBP19.19■□□□□ 0.66
TRAK1-203ENST00000396175 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
TRAK1-203ENST00000396175 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
TRAK1-203ENST00000396175 TSPY4P0CV99 314 aa19.11■□□□□ 0.65
TRAK1-203ENST00000396175 TSPY10P0CW01 314 aa19.11■□□□□ 0.65
TRAK1-203ENST00000396175 RBM19Q9Y4C8 960 aaKnown RBP19.11■□□□□ 0.65
TRAK1-203ENST00000396175 GOLGA6L22H0YM25 854 aa19.1■□□□□ 0.65
TRAK1-203ENST00000396175 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
TRAK1-203ENST00000396175 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
TRAK1-203ENST00000396175 LAS1LQ9Y4W2 734 aaKnown RBP19.08■□□□□ 0.64
TRAK1-203ENST00000396175 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
TRAK1-203ENST00000396175 MYH16Q9H6N6 1097 aa19.06■□□□□ 0.64
TRAK1-203ENST00000396175 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
TRAK1-203ENST00000396175 RTN4Q9NQC3 1192 aaKnown RBP19.05■□□□□ 0.64
TRAK1-203ENST00000396175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.642e-7■■□□□ 13.9
TRAK1-203ENST00000396175 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
TRAK1-203ENST00000396175 B4GALNT3Q6L9W6 998 aa19.03■□□□□ 0.64
TRAK1-203ENST00000396175 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
TRAK1-203ENST00000396175 SIN3AQ96ST3 1273 aa19.01■□□□□ 0.63
TRAK1-203ENST00000396175 NCLP19338 710 aaKnown RBP18.99■□□□□ 0.63
TRAK1-203ENST00000396175 TNNT2P45379 298 aaPredicted RBP18.99■□□□□ 0.63
TRAK1-203ENST00000396175 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
TRAK1-203ENST00000396175 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
TRAK1-203ENST00000396175 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
TRAK1-203ENST00000396175 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
TRAK1-203ENST00000396175 STAG3Q9UJ98 1225 aa18.93■□□□□ 0.62
TRAK1-203ENST00000396175 CCNB3Q8WWL7 1395 aa18.92■□□□□ 0.62
TRAK1-203ENST00000396175 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
TRAK1-203ENST00000396175 RGS3P49796 1198 aa18.91■□□□□ 0.62
TRAK1-203ENST00000396175 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
TRAK1-203ENST00000396175 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
TRAK1-203ENST00000396175 PTMAP06454 111 aaKnown RBP18.9■□□□□ 0.62
TRAK1-203ENST00000396175 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
TRAK1-203ENST00000396175 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
TRAK1-203ENST00000396175 L1TD1Q5T7N2 865 aaKnown RBP18.84■□□□□ 0.61
TRAK1-203ENST00000396175 DNTTIP2Q5QJE6 756 aaKnown RBP18.84■□□□□ 0.61
TRAK1-203ENST00000396175 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
TRAK1-203ENST00000396175 FTSJ3Q8IY81 847 aaKnown RBP18.83■□□□□ 0.61
TRAK1-203ENST00000396175 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.61
TRAK1-203ENST00000396175 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
TRAK1-203ENST00000396175 CASC1Q6TDU7 716 aa18.79■□□□□ 0.6
TRAK1-203ENST00000396175 MS4A1P11836 297 aa18.76■□□□□ 0.59
TRAK1-203ENST00000396175 VPS8Q8N3P4 1428 aa18.76■□□□□ 0.59
TRAK1-203ENST00000396175 SETD5Q9C0A6 1442 aa18.75■□□□□ 0.59
TRAK1-203ENST00000396175 CFDP1Q9UEE9 299 aaPredicted RBP18.74■□□□□ 0.59
TRAK1-203ENST00000396175 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
TRAK1-203ENST00000396175 PLEKHD1A6NEE1 506 aa18.74■□□□□ 0.59
TRAK1-203ENST00000396175 FRAT1Q92837 279 aaPredicted RBP18.74■□□□□ 0.59
TRAK1-203ENST00000396175 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
TRAK1-203ENST00000396175 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
TRAK1-203ENST00000396175 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
TRAK1-203ENST00000396175 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
TRAK1-203ENST00000396175 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
TRAK1-203ENST00000396175 NPM1P06748 294 aaKnown RBP eCLIP18.71■□□□□ 0.58
TRAK1-203ENST00000396175 HSCBQ8IWL3 235 aa18.7■□□□□ 0.58
TRAK1-203ENST00000396175 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
TRAK1-203ENST00000396175 SOGA1O94964 1423 aa18.69■□□□□ 0.58
TRAK1-203ENST00000396175 ZRSR1Q15695 479 aaKnown RBP18.67■□□□□ 0.58
TRAK1-203ENST00000396175 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
TRAK1-203ENST00000396175 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
TRAK1-203ENST00000396175 MAPK8IP3Q9UPT6 1336 aa18.67■□□□□ 0.58
TRAK1-203ENST00000396175 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
TRAK1-203ENST00000396175 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
TRAK1-203ENST00000396175 RCAN3Q9UKA8 241 aa18.64■□□□□ 0.57
TRAK1-203ENST00000396175 TMF1P82094 1093 aa18.62■□□□□ 0.57
TRAK1-203ENST00000396175 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
TRAK1-203ENST00000396175 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
TRAK1-203ENST00000396175 PLCB2Q00722 1185 aa18.61■□□□□ 0.57
TRAK1-203ENST00000396175 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
TRAK1-203ENST00000396175 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
TRAK1-203ENST00000396175 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.57
TRAK1-203ENST00000396175 CHAF1AQ13111 956 aaPredicted RBP18.57■□□□□ 0.56
TRAK1-203ENST00000396175 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
TRAK1-203ENST00000396175 BAZ1AQ9NRL2 1556 aaPredicted RBP18.57■□□□□ 0.56
TRAK1-203ENST00000396175 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
TRAK1-203ENST00000396175 PTMSP20962 102 aa18.56■□□□□ 0.56
TRAK1-203ENST00000396175 CDK11BP21127 795 aaKnown RBP18.56■□□□□ 0.56
TRAK1-203ENST00000396175 TPRNQ4KMQ1 711 aa18.56■□□□□ 0.56
TRAK1-203ENST00000396175 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
TRAK1-203ENST00000396175 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
TRAK1-203ENST00000396175 RALBP1Q15311 655 aa18.55■□□□□ 0.56
TRAK1-203ENST00000396175 GBP4Q96PP9 640 aa18.54■□□□□ 0.56
TRAK1-203ENST00000396175 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
TRAK1-203ENST00000396175 GOLGA6L6A8MZA4 724 aa18.53■□□□□ 0.56
TRAK1-203ENST00000396175 NRDCO43847 1150 aa18.52■□□□□ 0.56
TRAK1-203ENST00000396175 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
TRAK1-203ENST00000396175 SPRYD3Q8NCJ5 442 aa18.52■□□□□ 0.56
TRAK1-203ENST00000396175 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
TRAK1-203ENST00000396175 KCNH8Q96L42 1107 aa18.51■□□□□ 0.55
TRAK1-203ENST00000396175 NACADO15069 1562 aa18.51■□□□□ 0.55
TRAK1-203ENST00000396175 SLKQ9H2G2 1235 aaPredicted RBP18.51■□□□□ 0.55
TRAK1-203ENST00000396175 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
TRAK1-203ENST00000396175 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
TRAK1-203ENST00000396175 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
TRAK1-203ENST00000396175 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
TRAK1-203ENST00000396175 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms