RNA–Protein interactions for RNA: ENST00000394850.6

TTC7A-202, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best) BASIC

Gene TTC7A, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-202ENST00000394850 ARXQ96QS3 562 aa19.68■□□□□ 0.74
TTC7A-202ENST00000394850 KCNH8Q96L42 1107 aa19.67■□□□□ 0.74
TTC7A-202ENST00000394850 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
TTC7A-202ENST00000394850 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
TTC7A-202ENST00000394850 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
TTC7A-202ENST00000394850 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
TTC7A-202ENST00000394850 RTN4Q9NQC3 1192 aaKnown RBP19.62■□□□□ 0.73
TTC7A-202ENST00000394850 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
TTC7A-202ENST00000394850 ABCC8Q09428 1581 aa19.58■□□□□ 0.72
TTC7A-202ENST00000394850 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
TTC7A-202ENST00000394850 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
TTC7A-202ENST00000394850 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
TTC7A-202ENST00000394850 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
TTC7A-202ENST00000394850 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
TTC7A-202ENST00000394850 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
TTC7A-202ENST00000394850 DEKP35659 375 aaKnown RBP19.48■□□□□ 0.71
TTC7A-202ENST00000394850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■□□□ 11.5
TTC7A-202ENST00000394850 CCER2I3L3R5 266 aa19.43■□□□□ 0.7
TTC7A-202ENST00000394850 NEFMP07197 916 aa19.42■□□□□ 0.7
TTC7A-202ENST00000394850 UPF2Q9HAU5 1272 aaKnown RBP19.41■□□□□ 0.7
TTC7A-202ENST00000394850 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.7
TTC7A-202ENST00000394850 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
TTC7A-202ENST00000394850 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
TTC7A-202ENST00000394850 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
TTC7A-202ENST00000394850 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
TTC7A-202ENST00000394850 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
TTC7A-202ENST00000394850 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
TTC7A-202ENST00000394850 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
TTC7A-202ENST00000394850 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
TTC7A-202ENST00000394850 HSPA5P11021 654 aaKnown RBP19.34■□□□□ 0.69
TTC7A-202ENST00000394850 CHGAP10645 457 aaKnown RBP19.33■□□□□ 0.69
TTC7A-202ENST00000394850 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
TTC7A-202ENST00000394850 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
TTC7A-202ENST00000394850 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
TTC7A-202ENST00000394850 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
TTC7A-202ENST00000394850 FOXD1Q16676 465 aa19.32■□□□□ 0.68
TTC7A-202ENST00000394850 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
TTC7A-202ENST00000394850 RGS3P49796 1198 aa19.3■□□□□ 0.68
TTC7A-202ENST00000394850 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
TTC7A-202ENST00000394850 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
TTC7A-202ENST00000394850 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
TTC7A-202ENST00000394850 DDRGK1Q96HY6 314 aa19.27■□□□□ 0.68
TTC7A-202ENST00000394850 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
TTC7A-202ENST00000394850 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
TTC7A-202ENST00000394850 WIZO95785 1651 aa19.24■□□□□ 0.67
TTC7A-202ENST00000394850 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
TTC7A-202ENST00000394850 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
TTC7A-202ENST00000394850 CC2D1BQ5T0F9 858 aaKnown RBP19.19■□□□□ 0.66
TTC7A-202ENST00000394850 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
TTC7A-202ENST00000394850 GLIPR1L2Q4G1C9 344 aa19.17■□□□□ 0.66
TTC7A-202ENST00000394850 NEUROD2Q15784 382 aa19.16■□□□□ 0.66
TTC7A-202ENST00000394850 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
TTC7A-202ENST00000394850 CARMIL1Q5VZK9 1371 aa19.15■□□□□ 0.66
TTC7A-202ENST00000394850 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
TTC7A-202ENST00000394850 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
TTC7A-202ENST00000394850 BECN1Q14457 450 aa19.13■□□□□ 0.65
TTC7A-202ENST00000394850 CUX2O14529 1486 aa19.11■□□□□ 0.65
TTC7A-202ENST00000394850 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
TTC7A-202ENST00000394850 ERICH6BQ5W0A0 696 aa19.09■□□□□ 0.65
TTC7A-202ENST00000394850 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
TTC7A-202ENST00000394850 L3MBTL2Q969R5 705 aa19.08■□□□□ 0.65
TTC7A-202ENST00000394850 DCAF11Q8TEB1 546 aa19.08■□□□□ 0.64
TTC7A-202ENST00000394850 FRAT1Q92837 279 aaPredicted RBP19.08■□□□□ 0.64
TTC7A-202ENST00000394850 IPO9Q96P70 1041 aaKnown RBP19.06■□□□□ 0.64
TTC7A-202ENST00000394850 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
TTC7A-202ENST00000394850 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
TTC7A-202ENST00000394850 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
TTC7A-202ENST00000394850 RCAN3Q9UKA8 241 aa19.02■□□□□ 0.64
TTC7A-202ENST00000394850 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.64
TTC7A-202ENST00000394850 TNNT2P45379 298 aaPredicted RBP19.02■□□□□ 0.63
TTC7A-202ENST00000394850 PLEKHD1A6NEE1 506 aa19.01■□□□□ 0.63
TTC7A-202ENST00000394850 NAP1L5Q96NT1 182 aaPredicted RBP19.01■□□□□ 0.63
TTC7A-202ENST00000394850 NUDCQ9Y266 331 aa19.01■□□□□ 0.63
TTC7A-202ENST00000394850 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
TTC7A-202ENST00000394850 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
TTC7A-202ENST00000394850 PKD2Q13563 968 aa18.96■□□□□ 0.63
TTC7A-202ENST00000394850 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
TTC7A-202ENST00000394850 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
TTC7A-202ENST00000394850 NCLP19338 710 aaKnown RBP18.95■□□□□ 0.62
TTC7A-202ENST00000394850 TCERG1O14776 1098 aaKnown RBP18.94■□□□□ 0.62
TTC7A-202ENST00000394850 SLKQ9H2G2 1235 aaPredicted RBP18.93■□□□□ 0.62
TTC7A-202ENST00000394850 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
TTC7A-202ENST00000394850 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
TTC7A-202ENST00000394850 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
TTC7A-202ENST00000394850 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
TTC7A-202ENST00000394850 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
TTC7A-202ENST00000394850 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.62
TTC7A-202ENST00000394850 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.62
TTC7A-202ENST00000394850 STAG3Q9UJ98 1225 aa18.89■□□□□ 0.62
TTC7A-202ENST00000394850 PLIN1O60240 522 aa18.88■□□□□ 0.61
TTC7A-202ENST00000394850 TPRNQ4KMQ1 711 aa18.88■□□□□ 0.61
TTC7A-202ENST00000394850 GZF1Q9H116 711 aaPredicted RBP18.87■□□□□ 0.61
TTC7A-202ENST00000394850 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
TTC7A-202ENST00000394850 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
TTC7A-202ENST00000394850 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
TTC7A-202ENST00000394850 PDE4AP27815 886 aa18.84■□□□□ 0.61
TTC7A-202ENST00000394850 CDCA8Q53HL2 280 aa18.84■□□□□ 0.61
TTC7A-202ENST00000394850 TMF1P82094 1093 aa18.84■□□□□ 0.61
TTC7A-202ENST00000394850 GOLGA6L22H0YM25 854 aa18.83■□□□□ 0.61
TTC7A-202ENST00000394850 ZBED9Q6R2W3 1325 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms