RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
MDM2-208ENST00000393410 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
MDM2-208ENST00000393410 FAM212AQ96EL1 285 aa9.82□□□□□ -0.84
MDM2-208ENST00000393410 GABBR2O75899 941 aa9.77□□□□□ -0.85
MDM2-208ENST00000393410 CIZ1Q9ULV3 898 aaPredicted RBP9.76□□□□□ -0.85
MDM2-208ENST00000393410 GSE1Q14687 1217 aa9.75□□□□□ -0.85
MDM2-208ENST00000393410 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
MDM2-208ENST00000393410 MAP3K13O43283 966 aa9.72□□□□□ -0.85
MDM2-208ENST00000393410 GALR2O43603 387 aaPredicted RBP9.72□□□□□ -0.85
MDM2-208ENST00000393410 PYGBP11216 843 aa9.72□□□□□ -0.85
MDM2-208ENST00000393410 MS4A3Q96HJ5 214 aa9.7□□□□□ -0.86
MDM2-208ENST00000393410 CLCN6P51797 869 aa9.68□□□□□ -0.86
MDM2-208ENST00000393410 CHRM1P11229 460 aaPredicted RBP9.66□□□□□ -0.86
MDM2-208ENST00000393410 PKD2Q13563 968 aa9.66□□□□□ -0.86
MDM2-208ENST00000393410 TRPC6Q9Y210 931 aa9.65□□□□□ -0.86
MDM2-208ENST00000393410 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.86
MDM2-208ENST00000393410 IFNL1Q8IU54 200 aa9.64□□□□□ -0.87
MDM2-208ENST00000393410 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
MDM2-208ENST00000393410 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
MDM2-208ENST00000393410 PCDHB8Q9UN66 801 aa9.62□□□□□ -0.87
MDM2-208ENST00000393410 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
MDM2-208ENST00000393410 ECM2O94769 699 aaPredicted RBP9.58□□□□□ -0.88
MDM2-208ENST00000393410 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
MDM2-208ENST00000393410 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
MDM2-208ENST00000393410 ZNF467Q7Z7K2 595 aaPredicted RBP9.55□□□□□ -0.88
MDM2-208ENST00000393410 BMP2KQ9NSY1 1161 aaPredicted RBP9.55□□□□□ -0.88
MDM2-208ENST00000393410 RGL2O15211 777 aa9.53□□□□□ -0.88
MDM2-208ENST00000393410 ATMINO43313 823 aaPredicted RBP9.53□□□□□ -0.88
MDM2-208ENST00000393410 TIE1P35590 1138 aa9.52□□□□□ -0.89
MDM2-208ENST00000393410 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
MDM2-208ENST00000393410 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.89
MDM2-208ENST00000393410 TTLL13PA6NNM8 815 aa9.51□□□□□ -0.89
MDM2-208ENST00000393410 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
MDM2-208ENST00000393410 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
MDM2-208ENST00000393410 ATN1P54259 1190 aaPredicted RBP9.5□□□□□ -0.89
MDM2-208ENST00000393410 TMEM106CQ9BVX2 250 aa9.49□□□□□ -0.89
MDM2-208ENST00000393410 PSEN1P49768 467 aa9.48□□□□□ -0.89
MDM2-208ENST00000393410 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
MDM2-208ENST00000393410 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.9
MDM2-208ENST00000393410 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
MDM2-208ENST00000393410 TRIM35Q9UPQ4 493 aa9.44□□□□□ -0.9
MDM2-208ENST00000393410 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
MDM2-208ENST00000393410 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
MDM2-208ENST00000393410 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
MDM2-208ENST00000393410 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
MDM2-208ENST00000393410 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
MDM2-208ENST00000393410 POTEFA5A3E0 1075 aa9.36□□□□□ -0.91
MDM2-208ENST00000393410 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
MDM2-208ENST00000393410 C7P10643 843 aa9.35□□□□□ -0.91
MDM2-208ENST00000393410 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
MDM2-208ENST00000393410 STK25O00506 426 aa9.34□□□□□ -0.91
MDM2-208ENST00000393410 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
MDM2-208ENST00000393410 IER5LQ5T953 404 aa9.33□□□□□ -0.92
MDM2-208ENST00000393410 STK24Q9Y6E0 443 aa9.33□□□□□ -0.92
MDM2-208ENST00000393410 IRX5P78411 483 aaPredicted RBP9.32□□□□□ -0.92
MDM2-208ENST00000393410 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
MDM2-208ENST00000393410 POTEB2H3BUK9 544 aa9.31□□□□□ -0.92
MDM2-208ENST00000393410 MKRN3Q13064 507 aaKnown RBP9.31□□□□□ -0.92
MDM2-208ENST00000393410 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
MDM2-208ENST00000393410 GOLGA2Q08379 1002 aa9.3□□□□□ -0.92
MDM2-208ENST00000393410 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
MDM2-208ENST00000393410 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
MDM2-208ENST00000393410 SEC24BO95487 1268 aa9.27□□□□□ -0.93
MDM2-208ENST00000393410 ILDR1Q86SU0 546 aaPredicted RBP9.27□□□□□ -0.93
MDM2-208ENST00000393410 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
MDM2-208ENST00000393410 POTEJP0CG39 1038 aa9.26□□□□□ -0.93
MDM2-208ENST00000393410 LHX8Q68G74 356 aa9.26□□□□□ -0.93
MDM2-208ENST00000393410 OCEL1Q9H607 264 aa9.26□□□□□ -0.93
MDM2-208ENST00000393410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.26□□□□□ -0.936e-12■■□□□ 11.5
MDM2-208ENST00000393410 PLCG2P16885 1265 aa9.25□□□□□ -0.93
MDM2-208ENST00000393410 PHF8Q9UPP1 1060 aa9.24□□□□□ -0.93
MDM2-208ENST00000393410 SOX12O15370 315 aa9.23□□□□□ -0.93
MDM2-208ENST00000393410 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
MDM2-208ENST00000393410 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
MDM2-208ENST00000393410 MFRPQ9BY79 579 aa9.22□□□□□ -0.93
MDM2-208ENST00000393410 NKX1-1Q15270 411 aaPredicted RBP9.21□□□□□ -0.94
MDM2-208ENST00000393410 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
MDM2-208ENST00000393410 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
MDM2-208ENST00000393410 NLRP6P59044 892 aa9.17□□□□□ -0.94
MDM2-208ENST00000393410 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
MDM2-208ENST00000393410 PPP1R37O75864 691 aa9.12□□□□□ -0.95
MDM2-208ENST00000393410 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
MDM2-208ENST00000393410 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
MDM2-208ENST00000393410 GTPBP6O43824 516 aaPredicted RBP9.1□□□□□ -0.95
MDM2-208ENST00000393410 BBXQ8WY36 941 aaPredicted RBP9.09□□□□□ -0.95
MDM2-208ENST00000393410 TMEM121BQ9BXQ6 578 aaPredicted RBP9.09□□□□□ -0.95
MDM2-208ENST00000393410 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
MDM2-208ENST00000393410 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
MDM2-208ENST00000393410 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
MDM2-208ENST00000393410 G3V3G9 751 aa9.03□□□□□ -0.96
MDM2-208ENST00000393410 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.03□□□□□ -0.96
MDM2-208ENST00000393410 TMEM92Q6UXU6 159 aa9.02□□□□□ -0.97
MDM2-208ENST00000393410 C3orf67Q6ZVT6 689 aa9.02□□□□□ -0.97
MDM2-208ENST00000393410 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
MDM2-208ENST00000393410 RYDENQ9NUL5 291 aaKnown RBP9.01□□□□□ -0.97
MDM2-208ENST00000393410 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
MDM2-208ENST00000393410 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
MDM2-208ENST00000393410 SPRYD3Q8NCJ5 442 aa8.97□□□□□ -0.97
MDM2-208ENST00000393410 CFAP44Q96MT7 982 aa8.96□□□□□ -0.98
MDM2-208ENST00000393410 KIF3CO14782 793 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms