RNA–Protein interactions for RNA: ENST00000390917.1

RNU6-604P-201, Transcript of RNA, U6 small nuclear 604, pseudogene, humanhuman

BASIC

Gene RNU6-604P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-604P-201ENST00000390917 MS4A3Q96HJ5 214 aa3.88□□□□□ -1.79
RNU6-604P-201ENST00000390917 POTEFA5A3E0 1075 aa3.87□□□□□ -1.79
RNU6-604P-201ENST00000390917 SLAIN1Q8ND83 568 aa3.87□□□□□ -1.79
RNU6-604P-201ENST00000390917 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
RNU6-604P-201ENST00000390917 KRTAP3-2Q9BYR7 98 aa3.87□□□□□ -1.79
RNU6-604P-201ENST00000390917 PABPN1Q86U42 306 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU6-604P-201ENST00000390917 RNF166Q96A37 237 aaPredicted RBP3.86□□□□□ -1.79
RNU6-604P-201ENST00000390917 ATN1P54259 1190 aaPredicted RBP3.85□□□□□ -1.79
RNU6-604P-201ENST00000390917 SNPHO15079 494 aa3.84□□□□□ -1.79
RNU6-604P-201ENST00000390917 MARVELD3Q96A59 401 aa3.84□□□□□ -1.79
RNU6-604P-201ENST00000390917 SEC24BO95487 1268 aa3.82□□□□□ -1.8
RNU6-604P-201ENST00000390917 EMP3P54852 163 aa3.82□□□□□ -1.8
RNU6-604P-201ENST00000390917 HS3ST6Q96QI5 342 aa3.79□□□□□ -1.8
RNU6-604P-201ENST00000390917 COLQQ9Y215 455 aaPredicted RBP3.79□□□□□ -1.8
RNU6-604P-201ENST00000390917 CREBZFQ9NS37 354 aa3.78□□□□□ -1.8
RNU6-604P-201ENST00000390917 IER5LQ5T953 404 aa3.77□□□□□ -1.81
RNU6-604P-201ENST00000390917 BMP2KQ9NSY1 1161 aaPredicted RBP3.77□□□□□ -1.81
RNU6-604P-201ENST00000390917 MKRN4PQ13434 485 aaPredicted RBP3.76□□□□□ -1.81
RNU6-604P-201ENST00000390917 MYT1LQ9UL68 1186 aa3.76□□□□□ -1.81
RNU6-604P-201ENST00000390917 NPM1P06748 294 aaKnown RBP eCLIP3.75□□□□□ -1.81
RNU6-604P-201ENST00000390917 TIE1P35590 1138 aa3.75□□□□□ -1.81
RNU6-604P-201ENST00000390917 POTEB3A0JP26 581 aa3.73□□□□□ -1.81
RNU6-604P-201ENST00000390917 FAM205CA6NFA0 338 aa3.73□□□□□ -1.81
RNU6-604P-201ENST00000390917 POTEBQ6S5H4 581 aa3.73□□□□□ -1.81
RNU6-604P-201ENST00000390917 PTGER2P43116 358 aa3.72□□□□□ -1.81
RNU6-604P-201ENST00000390917 TTLL13PA6NNM8 815 aa3.68□□□□□ -1.82
RNU6-604P-201ENST00000390917 FOXD4L1Q9NU39 408 aa3.68□□□□□ -1.82
RNU6-604P-201ENST00000390917 PLA2G2EQ9NZK7 142 aa3.68□□□□□ -1.82
RNU6-604P-201ENST00000390917 PLCG2P16885 1265 aa3.67□□□□□ -1.82
RNU6-604P-201ENST00000390917 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.67□□□□□ -1.82
RNU6-604P-201ENST00000390917 STAG3Q9UJ98 1225 aa3.67□□□□□ -1.82
RNU6-604P-201ENST00000390917 ATXN8OSP0DMR3 200 aa3.66□□□□□ -1.82
RNU6-604P-201ENST00000390917 KCNA4P22459 653 aa3.66□□□□□ -1.82
RNU6-604P-201ENST00000390917 TRIM35Q9UPQ4 493 aa3.66□□□□□ -1.82
RNU6-604P-201ENST00000390917 TRPC6Q9Y210 931 aa3.66□□□□□ -1.82
RNU6-604P-201ENST00000390917 KIF12Q96FN5 646 aa3.65□□□□□ -1.83
RNU6-604P-201ENST00000390917 CCDC61Q9Y6R9 512 aa3.65□□□□□ -1.83
RNU6-604P-201ENST00000390917 IRX2Q9BZI1 471 aaPredicted RBP3.64□□□□□ -1.83
RNU6-604P-201ENST00000390917 MNX1P50219 401 aaPredicted RBP3.63□□□□□ -1.83
RNU6-604P-201ENST00000390917 RGS20O76081 388 aa3.61□□□□□ -1.83
RNU6-604P-201ENST00000390917 IRX5P78411 483 aaPredicted RBP3.59□□□□□ -1.83
RNU6-604P-201ENST00000390917 TSPYL2Q9H2G4 693 aaPredicted RBP3.59□□□□□ -1.83
RNU6-604P-201ENST00000390917 MAP3K13O43283 966 aa3.58□□□□□ -1.84
RNU6-604P-201ENST00000390917 C3orf67Q6ZVT6 689 aa3.58□□□□□ -1.84
RNU6-604P-201ENST00000390917 ERBB3P21860 1342 aa3.57□□□□□ -1.84
RNU6-604P-201ENST00000390917 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
RNU6-604P-201ENST00000390917 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
RNU6-604P-201ENST00000390917 OCEL1Q9H607 264 aa3.56□□□□□ -1.84
RNU6-604P-201ENST00000390917 HCSTQ9UBK5 93 aa3.55□□□□□ -1.84
RNU6-604P-201ENST00000390917 HOXB1P14653 301 aaPredicted RBP3.54□□□□□ -1.84
RNU6-604P-201ENST00000390917 SGIP1Q9BQI5 828 aa3.53□□□□□ -1.84
RNU6-604P-201ENST00000390917 VARS2Q5ST30 1063 aaKnown RBP3.52□□□□□ -1.85
RNU6-604P-201ENST00000390917 Q6ZNB5 142 aa3.51□□□□□ -1.85
RNU6-604P-201ENST00000390917 ZNF687Q8N1G0 1237 aa3.51□□□□□ -1.85
RNU6-604P-201ENST00000390917 TMEM106CQ9BVX2 250 aa3.51□□□□□ -1.85
RNU6-604P-201ENST00000390917 ZNF710Q8N1W2 664 aa3.5□□□□□ -1.85
RNU6-604P-201ENST00000390917 PCDHB13Q9Y5F0 798 aa3.49□□□□□ -1.85
RNU6-604P-201ENST00000390917 HOXB3P14651 431 aaPredicted RBP3.48□□□□□ -1.85
RNU6-604P-201ENST00000390917 ANKRD13DQ6ZTN6 518 aa3.48□□□□□ -1.85
RNU6-604P-201ENST00000390917 DOK7Q18PE1 504 aa3.47□□□□□ -1.85
RNU6-604P-201ENST00000390917 L3MBTL3Q96JM7 780 aaPredicted RBP3.47□□□□□ -1.85
RNU6-604P-201ENST00000390917 RIMBP2O15034 1052 aa3.46□□□□□ -1.86
RNU6-604P-201ENST00000390917 LSM11P83369 360 aaKnown RBP eCLIP3.46□□□□□ -1.86
RNU6-604P-201ENST00000390917 IFFO2Q5TF58 517 aa3.44□□□□□ -1.86
RNU6-604P-201ENST00000390917 IFNL1Q8IU54 200 aa3.43□□□□□ -1.86
RNU6-604P-201ENST00000390917 PDCD7Q8N8D1 485 aaKnown RBP3.43□□□□□ -1.86
RNU6-604P-201ENST00000390917 A0A0G2JS52 829 aa3.42□□□□□ -1.86
RNU6-604P-201ENST00000390917 LAPTM4AQ15012 233 aa3.41□□□□□ -1.86
RNU6-604P-201ENST00000390917 ZSWIM6Q9HCJ5 1215 aa3.41□□□□□ -1.86
RNU6-604P-201ENST00000390917 PBX2P40425 430 aa3.39□□□□□ -1.87
RNU6-604P-201ENST00000390917 RASEFQ8IZ41 740 aa3.39□□□□□ -1.87
RNU6-604P-201ENST00000390917 LCE2BO14633 110 aa3.37□□□□□ -1.87
RNU6-604P-201ENST00000390917 TRAF7Q6Q0C0 670 aa3.37□□□□□ -1.87
RNU6-604P-201ENST00000390917 SLC4A1APQ9BWU0 796 aaKnown RBP3.36□□□□□ -1.87
RNU6-604P-201ENST00000390917 ZNF775Q96BV0 537 aaPredicted RBP3.35□□□□□ -1.87
RNU6-604P-201ENST00000390917 ZBTB22O15209 634 aa3.34□□□□□ -1.87
RNU6-604P-201ENST00000390917 G3V3G9 751 aa3.33□□□□□ -1.88
RNU6-604P-201ENST00000390917 DCAF8Q5TAQ9 597 aa3.33□□□□□ -1.88
RNU6-604P-201ENST00000390917 PLEKHG5O94827 1062 aa3.32□□□□□ -1.88
RNU6-604P-201ENST00000390917 GOLGA2Q08379 1002 aa3.32□□□□□ -1.88
RNU6-604P-201ENST00000390917 MKRN3Q13064 507 aaKnown RBP3.32□□□□□ -1.88
RNU6-604P-201ENST00000390917 ZNF787Q6DD87 383 aa3.32□□□□□ -1.88
RNU6-604P-201ENST00000390917 GPR153Q6NV75 609 aa3.31□□□□□ -1.88
RNU6-604P-201ENST00000390917 ADGRD1Q6QNK2 874 aa3.31□□□□□ -1.88
RNU6-604P-201ENST00000390917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-604P-201ENST00000390917 ZNF316A6NFI3 1004 aaPredicted RBP3.3□□□□□ -1.88
RNU6-604P-201ENST00000390917 STK17AQ9UEE5 414 aa3.3□□□□□ -1.88
RNU6-604P-201ENST00000390917 KCTD12Q96CX2 325 aaKnown RBP3.29□□□□□ -1.88
RNU6-604P-201ENST00000390917 BOLA1Q9Y3E2 137 aa3.29□□□□□ -1.88
RNU6-604P-201ENST00000390917 SPDYE4A6NLX3 237 aa3.28□□□□□ -1.88
RNU6-604P-201ENST00000390917 ILDR1Q86SU0 546 aaPredicted RBP3.28□□□□□ -1.88
RNU6-604P-201ENST00000390917 TK2O00142 265 aa3.26□□□□□ -1.89
RNU6-604P-201ENST00000390917 NRG2O14511 850 aaPredicted RBP3.26□□□□□ -1.89
RNU6-604P-201ENST00000390917 FAM212AQ96EL1 285 aa3.26□□□□□ -1.89
RNU6-604P-201ENST00000390917 GFRA3O60609 400 aa3.25□□□□□ -1.89
RNU6-604P-201ENST00000390917 SUZ12Q15022 739 aaKnown RBP3.25□□□□□ -1.89
RNU6-604P-201ENST00000390917 POTEEQ6S8J3 1075 aa3.25□□□□□ -1.89
RNU6-604P-201ENST00000390917 HRO43593 1189 aa3.24□□□□□ -1.89
RNU6-604P-201ENST00000390917 AXIN2Q9Y2T1 843 aa3.24□□□□□ -1.89
RNU6-604P-201ENST00000390917 ARSIQ5FYB1 569 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms