RNA–Protein interactions for RNA: ENST00000390866.1

SNORD78.1-201, Transcript of small nucleolar RNA, C/D box 78, humanhuman

BASIC

Gene SNORD78, Length 65 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD78.1-201ENST00000390866 PAK3O75914 559 aaPredicted RBP6.93□□□□□ -1.3
SNORD78.1-201ENST00000390866 TMEM121BQ9BXQ6 578 aaPredicted RBP6.92□□□□□ -1.3
SNORD78.1-201ENST00000390866 ATN1P54259 1190 aaPredicted RBP6.91□□□□□ -1.3
SNORD78.1-201ENST00000390866 MS4A3Q96HJ5 214 aa6.91□□□□□ -1.3
SNORD78.1-201ENST00000390866 SLAIN1Q8ND83 568 aa6.88□□□□□ -1.31
SNORD78.1-201ENST00000390866 MARVELD3Q96A59 401 aa6.87□□□□□ -1.31
SNORD78.1-201ENST00000390866 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
SNORD78.1-201ENST00000390866 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
SNORD78.1-201ENST00000390866 MKRN4PQ13434 485 aaPredicted RBP6.83□□□□□ -1.32
SNORD78.1-201ENST00000390866 CREBZFQ9NS37 354 aa6.81□□□□□ -1.32
SNORD78.1-201ENST00000390866 COLQQ9Y215 455 aaPredicted RBP6.81□□□□□ -1.32
SNORD78.1-201ENST00000390866 SEC24BO95487 1268 aa6.77□□□□□ -1.33
SNORD78.1-201ENST00000390866 KCNA4P22459 653 aa6.76□□□□□ -1.33
SNORD78.1-201ENST00000390866 RNF166Q96A37 237 aaPredicted RBP6.75□□□□□ -1.33
SNORD78.1-201ENST00000390866 SNPHO15079 494 aa6.73□□□□□ -1.33
SNORD78.1-201ENST00000390866 BMP2KQ9NSY1 1161 aaPredicted RBP6.73□□□□□ -1.33
SNORD78.1-201ENST00000390866 POTEB3A0JP26 581 aa6.72□□□□□ -1.33
SNORD78.1-201ENST00000390866 POTEBQ6S5H4 581 aa6.72□□□□□ -1.33
SNORD78.1-201ENST00000390866 EMP3P54852 163 aa6.71□□□□□ -1.34
SNORD78.1-201ENST00000390866 HS3ST6Q96QI5 342 aa6.71□□□□□ -1.34
SNORD78.1-201ENST00000390866 FAM205CA6NFA0 338 aa6.66□□□□□ -1.34
SNORD78.1-201ENST00000390866 NPM1P06748 294 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNORD78.1-201ENST00000390866 TRPC6Q9Y210 931 aa6.64□□□□□ -1.35
SNORD78.1-201ENST00000390866 TIE1P35590 1138 aa6.63□□□□□ -1.35
SNORD78.1-201ENST00000390866 FOXD4L1Q9NU39 408 aa6.63□□□□□ -1.35
SNORD78.1-201ENST00000390866 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
SNORD78.1-201ENST00000390866 IER5LQ5T953 404 aa6.61□□□□□ -1.35
SNORD78.1-201ENST00000390866 TTLL13PA6NNM8 815 aa6.57□□□□□ -1.36
SNORD78.1-201ENST00000390866 KIF12Q96FN5 646 aa6.56□□□□□ -1.36
SNORD78.1-201ENST00000390866 MNX1P50219 401 aaPredicted RBP6.55□□□□□ -1.36
SNORD78.1-201ENST00000390866 ATXN8OSP0DMR3 200 aa6.54□□□□□ -1.36
SNORD78.1-201ENST00000390866 TRIM35Q9UPQ4 493 aa6.53□□□□□ -1.36
SNORD78.1-201ENST00000390866 STAG3Q9UJ98 1225 aa6.52□□□□□ -1.37
SNORD78.1-201ENST00000390866 CCDC61Q9Y6R9 512 aa6.52□□□□□ -1.37
SNORD78.1-201ENST00000390866 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.51□□□□□ -1.37
SNORD78.1-201ENST00000390866 TSPYL2Q9H2G4 693 aaPredicted RBP6.5□□□□□ -1.37
SNORD78.1-201ENST00000390866 PLCG2P16885 1265 aa6.49□□□□□ -1.37
SNORD78.1-201ENST00000390866 PLA2G2EQ9NZK7 142 aa6.49□□□□□ -1.37
SNORD78.1-201ENST00000390866 MAP3K13O43283 966 aa6.46□□□□□ -1.38
SNORD78.1-201ENST00000390866 PTGER2P43116 358 aa6.41□□□□□ -1.38
SNORD78.1-201ENST00000390866 IRX5P78411 483 aaPredicted RBP6.4□□□□□ -1.38
SNORD78.1-201ENST00000390866 IRX2Q9BZI1 471 aaPredicted RBP6.38□□□□□ -1.39
SNORD78.1-201ENST00000390866 ERBB3P21860 1342 aa6.35□□□□□ -1.39
SNORD78.1-201ENST00000390866 OCEL1Q9H607 264 aa6.34□□□□□ -1.39
SNORD78.1-201ENST00000390866 C3orf67Q6ZVT6 689 aa6.29□□□□□ -1.4
SNORD78.1-201ENST00000390866 HOXB1P14653 301 aaPredicted RBP6.28□□□□□ -1.4
SNORD78.1-201ENST00000390866 TMEM106CQ9BVX2 250 aa6.28□□□□□ -1.4
SNORD78.1-201ENST00000390866 VARS2Q5ST30 1063 aaKnown RBP6.26□□□□□ -1.41
SNORD78.1-201ENST00000390866 SGIP1Q9BQI5 828 aa6.26□□□□□ -1.41
SNORD78.1-201ENST00000390866 RGS20O76081 388 aa6.25□□□□□ -1.41
SNORD78.1-201ENST00000390866 HCSTQ9UBK5 93 aa6.25□□□□□ -1.41
SNORD78.1-201ENST00000390866 PCDHB13Q9Y5F0 798 aa6.25□□□□□ -1.41
SNORD78.1-201ENST00000390866 ZNF687Q8N1G0 1237 aa6.24□□□□□ -1.41
SNORD78.1-201ENST00000390866 HOXB3P14651 431 aaPredicted RBP6.23□□□□□ -1.41
SNORD78.1-201ENST00000390866 ANKRD13DQ6ZTN6 518 aa6.23□□□□□ -1.41
SNORD78.1-201ENST00000390866 ZNF710Q8N1W2 664 aa6.21□□□□□ -1.42
SNORD78.1-201ENST00000390866 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
SNORD78.1-201ENST00000390866 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
SNORD78.1-201ENST00000390866 ZBTB22O15209 634 aa6.19□□□□□ -1.42
SNORD78.1-201ENST00000390866 Q6ZNB5 142 aa6.19□□□□□ -1.42
SNORD78.1-201ENST00000390866 IFNL1Q8IU54 200 aa6.18□□□□□ -1.42
SNORD78.1-201ENST00000390866 L3MBTL3Q96JM7 780 aaPredicted RBP6.16□□□□□ -1.42
SNORD78.1-201ENST00000390866 SLC4A1APQ9BWU0 796 aaKnown RBP6.16□□□□□ -1.42
SNORD78.1-201ENST00000390866 RASEFQ8IZ41 740 aa6.14□□□□□ -1.43
SNORD78.1-201ENST00000390866 PDCD7Q8N8D1 485 aaKnown RBP6.14□□□□□ -1.43
SNORD78.1-201ENST00000390866 DOK7Q18PE1 504 aa6.11□□□□□ -1.43
SNORD78.1-201ENST00000390866 LSM11P83369 360 aaKnown RBP eCLIP6.1□□□□□ -1.43
SNORD78.1-201ENST00000390866 RIMBP2O15034 1052 aa6.05□□□□□ -1.44
SNORD78.1-201ENST00000390866 LCE2BO14633 110 aa6.02□□□□□ -1.45
SNORD78.1-201ENST00000390866 IFFO2Q5TF58 517 aa6.01□□□□□ -1.45
SNORD78.1-201ENST00000390866 A0A0G2JS52 829 aa6□□□□□ -1.45
SNORD78.1-201ENST00000390866 TRAF7Q6Q0C0 670 aa5.99□□□□□ -1.45
SNORD78.1-201ENST00000390866 ZSWIM6Q9HCJ5 1215 aa5.98□□□□□ -1.45
SNORD78.1-201ENST00000390866 GPR153Q6NV75 609 aa5.96□□□□□ -1.46
SNORD78.1-201ENST00000390866 ZNF775Q96BV0 537 aaPredicted RBP5.96□□□□□ -1.46
SNORD78.1-201ENST00000390866 SPDYE4A6NLX3 237 aa5.95□□□□□ -1.46
SNORD78.1-201ENST00000390866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.94□□□□□ -1.46
SNORD78.1-201ENST00000390866 MKRN3Q13064 507 aaKnown RBP5.93□□□□□ -1.46
SNORD78.1-201ENST00000390866 PBX2P40425 430 aa5.91□□□□□ -1.46
SNORD78.1-201ENST00000390866 ZNF787Q6DD87 383 aa5.91□□□□□ -1.46
SNORD78.1-201ENST00000390866 LAPTM4AQ15012 233 aa5.9□□□□□ -1.46
SNORD78.1-201ENST00000390866 ZNF316A6NFI3 1004 aaPredicted RBP5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 G3V3G9 751 aa5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 PLEKHG5O94827 1062 aa5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 GOLGA2Q08379 1002 aa5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 DCAF8Q5TAQ9 597 aa5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 DPY19L2Q6NUT2 758 aa5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 POTEEQ6S8J3 1075 aa5.89□□□□□ -1.47
SNORD78.1-201ENST00000390866 BOLA1Q9Y3E2 137 aa5.88□□□□□ -1.47
SNORD78.1-201ENST00000390866 KCTD12Q96CX2 325 aaKnown RBP5.87□□□□□ -1.47
SNORD78.1-201ENST00000390866 ADGRD1Q6QNK2 874 aa5.86□□□□□ -1.47
SNORD78.1-201ENST00000390866 AXIN2Q9Y2T1 843 aa5.86□□□□□ -1.47
SNORD78.1-201ENST00000390866 ARSIQ5FYB1 569 aa5.85□□□□□ -1.47
SNORD78.1-201ENST00000390866 ILDR1Q86SU0 546 aaPredicted RBP5.85□□□□□ -1.47
SNORD78.1-201ENST00000390866 PCDHB8Q9UN66 801 aa5.85□□□□□ -1.47
SNORD78.1-201ENST00000390866 NUBP1P53384 320 aa5.82□□□□□ -1.48
SNORD78.1-201ENST00000390866 MIER1Q8N108 512 aa5.82□□□□□ -1.48
SNORD78.1-201ENST00000390866 GFRA3O60609 400 aa5.8□□□□□ -1.48
SNORD78.1-201ENST00000390866 PTPN5P54829 565 aa5.8□□□□□ -1.48
SNORD78.1-201ENST00000390866 HRO43593 1189 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms