RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 ATMINO43313 823 aaPredicted RBP7.48□□□□□ -1.21
SNORA40.19-201ENST00000390846 NPM1P06748 294 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNORA40.19-201ENST00000390846 KIF12Q96FN5 646 aa7.48□□□□□ -1.21
SNORA40.19-201ENST00000390846 DCBLD2Q96PD2 775 aa7.47□□□□□ -1.21
SNORA40.19-201ENST00000390846 NUBP1P53384 320 aa7.46□□□□□ -1.22
SNORA40.19-201ENST00000390846 TSPYL2Q9H2G4 693 aaPredicted RBP7.44□□□□□ -1.22
SNORA40.19-201ENST00000390846 ATN1P54259 1190 aaPredicted RBP7.42□□□□□ -1.22
SNORA40.19-201ENST00000390846 FKBP8Q14318 412 aa7.42□□□□□ -1.22
SNORA40.19-201ENST00000390846 MAP3K13O43283 966 aa7.41□□□□□ -1.22
SNORA40.19-201ENST00000390846 MIER1Q8N108 512 aa7.4□□□□□ -1.22
SNORA40.19-201ENST00000390846 BMP2KQ9NSY1 1161 aaPredicted RBP7.4□□□□□ -1.22
SNORA40.19-201ENST00000390846 PAK3O75914 559 aaPredicted RBP7.38□□□□□ -1.23
SNORA40.19-201ENST00000390846 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
SNORA40.19-201ENST00000390846 METRNQ9UJH8 293 aa7.35□□□□□ -1.23
SNORA40.19-201ENST00000390846 COLQQ9Y215 455 aaPredicted RBP7.33□□□□□ -1.24
SNORA40.19-201ENST00000390846 TTLL13PA6NNM8 815 aa7.32□□□□□ -1.24
SNORA40.19-201ENST00000390846 C7P10643 843 aa7.32□□□□□ -1.24
SNORA40.19-201ENST00000390846 TIE1P35590 1138 aa7.31□□□□□ -1.24
SNORA40.19-201ENST00000390846 IFNL1Q8IU54 200 aa7.31□□□□□ -1.24
SNORA40.19-201ENST00000390846 SLC39A7Q92504 469 aa7.31□□□□□ -1.24
SNORA40.19-201ENST00000390846 PLCD3Q8N3E9 789 aa7.28□□□□□ -1.24
SNORA40.19-201ENST00000390846 SGIP1Q9BQI5 828 aa7.28□□□□□ -1.24
SNORA40.19-201ENST00000390846 PCDHB13Q9Y5F0 798 aa7.24□□□□□ -1.25
SNORA40.19-201ENST00000390846 TRIM35Q9UPQ4 493 aa7.22□□□□□ -1.25
SNORA40.19-201ENST00000390846 IRX5P78411 483 aaPredicted RBP7.21□□□□□ -1.26
SNORA40.19-201ENST00000390846 VASPP50552 380 aaPredicted RBP7.2□□□□□ -1.26
SNORA40.19-201ENST00000390846 PYGBP11216 843 aa7.19□□□□□ -1.26
SNORA40.19-201ENST00000390846 IFNLR1Q8IU57 520 aaPredicted RBP7.19□□□□□ -1.26
SNORA40.19-201ENST00000390846 PCDHB8Q9UN66 801 aa7.19□□□□□ -1.26
SNORA40.19-201ENST00000390846 PLEKHG5O94827 1062 aa7.18□□□□□ -1.26
SNORA40.19-201ENST00000390846 IER5LQ5T953 404 aa7.18□□□□□ -1.26
SNORA40.19-201ENST00000390846 POTEMA6NI47 508 aa7.17□□□□□ -1.26
SNORA40.19-201ENST00000390846 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
SNORA40.19-201ENST00000390846 ZBTB47Q9UFB7 747 aaPredicted RBP7.17□□□□□ -1.26
SNORA40.19-201ENST00000390846 POTEGQ6S5H5 508 aa7.16□□□□□ -1.26
SNORA40.19-201ENST00000390846 TMEM106CQ9BVX2 250 aa7.16□□□□□ -1.26
SNORA40.19-201ENST00000390846 CHRM1P11229 460 aaPredicted RBP7.14□□□□□ -1.27
SNORA40.19-201ENST00000390846 FBXO3Q9UK99 471 aa7.14□□□□□ -1.27
SNORA40.19-201ENST00000390846 DCAF8Q5TAQ9 597 aa7.13□□□□□ -1.27
SNORA40.19-201ENST00000390846 ILDR1Q86SU0 546 aaPredicted RBP7.13□□□□□ -1.27
SNORA40.19-201ENST00000390846 MAMSTRQ6ZN01 415 aa7.12□□□□□ -1.27
SNORA40.19-201ENST00000390846 PDCD7Q8N8D1 485 aaKnown RBP7.12□□□□□ -1.27
SNORA40.19-201ENST00000390846 SCUBE2Q9NQ36 999 aa7.07□□□□□ -1.28
SNORA40.19-201ENST00000390846 SEC24BO95487 1268 aa7.06□□□□□ -1.28
SNORA40.19-201ENST00000390846 FAM163AQ96GL9 167 aaPredicted RBP7.06□□□□□ -1.28
SNORA40.19-201ENST00000390846 OCEL1Q9H607 264 aa7.05□□□□□ -1.28
SNORA40.19-201ENST00000390846 GSE1Q14687 1217 aa7.04□□□□□ -1.28
SNORA40.19-201ENST00000390846 ST18O60284 1047 aa7.03□□□□□ -1.28
SNORA40.19-201ENST00000390846 DPY19L2Q6NUT2 758 aa7.03□□□□□ -1.28
SNORA40.19-201ENST00000390846 KLHL34Q8N239 644 aa7.02□□□□□ -1.29
SNORA40.19-201ENST00000390846 PSEN1P49768 467 aa7.01□□□□□ -1.29
SNORA40.19-201ENST00000390846 SPOCK2Q92563 424 aa7.01□□□□□ -1.29
SNORA40.19-201ENST00000390846 RNF25Q96BH1 459 aaPredicted RBP7.01□□□□□ -1.29
SNORA40.19-201ENST00000390846 PLSCR2Q9NRY7 297 aa7.01□□□□□ -1.29
SNORA40.19-201ENST00000390846 PLCG2P16885 1265 aa7□□□□□ -1.29
SNORA40.19-201ENST00000390846 ZNF467Q7Z7K2 595 aaPredicted RBP7□□□□□ -1.29
SNORA40.19-201ENST00000390846 SLAIN1Q8ND83 568 aa7□□□□□ -1.29
SNORA40.19-201ENST00000390846 POTEB3A0JP26 581 aa6.97□□□□□ -1.29
SNORA40.19-201ENST00000390846 POTEBQ6S5H4 581 aa6.97□□□□□ -1.29
SNORA40.19-201ENST00000390846 PCDH10Q9P2E7 1040 aa6.97□□□□□ -1.29
SNORA40.19-201ENST00000390846 PDAP1Q13442 181 aaKnown RBP6.95□□□□□ -1.3
SNORA40.19-201ENST00000390846 TMEM121BQ9BXQ6 578 aaPredicted RBP6.93□□□□□ -1.3
SNORA40.19-201ENST00000390846 CDAN1Q8IWY9 1227 aa6.92□□□□□ -1.3
SNORA40.19-201ENST00000390846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.92□□□□□ -1.3
SNORA40.19-201ENST00000390846 HOXB3P14651 431 aaPredicted RBP6.91□□□□□ -1.3
SNORA40.19-201ENST00000390846 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
SNORA40.19-201ENST00000390846 MS4A4AQ96JQ5 239 aa6.91□□□□□ -1.3
SNORA40.19-201ENST00000390846 CABP2Q9NPB3 220 aa6.91□□□□□ -1.3
SNORA40.19-201ENST00000390846 CIZ1Q9ULV3 898 aaPredicted RBP6.91□□□□□ -1.3
SNORA40.19-201ENST00000390846 EFCAB3Q8N7B9 438 aa6.89□□□□□ -1.31
SNORA40.19-201ENST00000390846 MKRN3Q13064 507 aaKnown RBP6.88□□□□□ -1.31
SNORA40.19-201ENST00000390846 MARVELD3Q96A59 401 aa6.88□□□□□ -1.31
SNORA40.19-201ENST00000390846 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.88□□□□□ -1.31
SNORA40.19-201ENST00000390846 L3MBTL3Q96JM7 780 aaPredicted RBP6.85□□□□□ -1.31
SNORA40.19-201ENST00000390846 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
SNORA40.19-201ENST00000390846 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
SNORA40.19-201ENST00000390846 BOLA1Q9Y3E2 137 aa6.84□□□□□ -1.31
SNORA40.19-201ENST00000390846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.83□□□□□ -1.32
SNORA40.19-201ENST00000390846 ZFP91Q96JP5 570 aaPredicted RBP6.83□□□□□ -1.32
SNORA40.19-201ENST00000390846 SPNS2Q8IVW8 549 aa6.82□□□□□ -1.32
SNORA40.19-201ENST00000390846 FBXO22Q8NEZ5 403 aa6.82□□□□□ -1.32
SNORA40.19-201ENST00000390846 PKD2Q13563 968 aa6.81□□□□□ -1.32
SNORA40.19-201ENST00000390846 RIOK3O14730 519 aaKnown RBP6.8□□□□□ -1.32
SNORA40.19-201ENST00000390846 TRIM41Q8WV44 630 aa6.8□□□□□ -1.32
SNORA40.19-201ENST00000390846 PHF8Q9UPP1 1060 aa6.8□□□□□ -1.32
SNORA40.19-201ENST00000390846 GOLGA2Q08379 1002 aa6.79□□□□□ -1.32
SNORA40.19-201ENST00000390846 MICALL2Q8IY33 904 aa6.79□□□□□ -1.32
SNORA40.19-201ENST00000390846 SNPHO15079 494 aa6.78□□□□□ -1.32
SNORA40.19-201ENST00000390846 MMRN1Q13201 1228 aa6.78□□□□□ -1.32
SNORA40.19-201ENST00000390846 C3orf67Q6ZVT6 689 aa6.78□□□□□ -1.32
SNORA40.19-201ENST00000390846 HS3ST6Q96QI5 342 aa6.77□□□□□ -1.33
SNORA40.19-201ENST00000390846 SOX12O15370 315 aa6.76□□□□□ -1.33
SNORA40.19-201ENST00000390846 MFRPQ9BY79 579 aa6.76□□□□□ -1.33
SNORA40.19-201ENST00000390846 VGFO15240 615 aaPredicted RBP6.75□□□□□ -1.33
SNORA40.19-201ENST00000390846 HOXB1P14653 301 aaPredicted RBP6.75□□□□□ -1.33
SNORA40.19-201ENST00000390846 GPR153Q6NV75 609 aa6.74□□□□□ -1.33
SNORA40.19-201ENST00000390846 KIF3CO14782 793 aa6.73□□□□□ -1.33
SNORA40.19-201ENST00000390846 RGL2O15211 777 aa6.73□□□□□ -1.33
SNORA40.19-201ENST00000390846 FAM205CA6NFA0 338 aa6.72□□□□□ -1.33
SNORA40.19-201ENST00000390846 EMP3P54852 163 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms