RNA–Protein interactions for RNA: ENST00000389900.8

RNF216-201, Transcript of ring finger protein 216, humanhuman

TSL 1 (best)

Gene RNF216, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-201ENST00000389900 DIEXFQ68CQ4 756 aaKnown RBP13.22□□□□□ -0.29
RNF216-201ENST00000389900 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
RNF216-201ENST00000389900 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
RNF216-201ENST00000389900 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
RNF216-201ENST00000389900 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
RNF216-201ENST00000389900 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
RNF216-201ENST00000389900 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
RNF216-201ENST00000389900 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
RNF216-201ENST00000389900 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
RNF216-201ENST00000389900 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
RNF216-201ENST00000389900 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
RNF216-201ENST00000389900 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
RNF216-201ENST00000389900 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
RNF216-201ENST00000389900 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
RNF216-201ENST00000389900 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
RNF216-201ENST00000389900 EEA1Q15075 1411 aa13.11□□□□□ -0.31
RNF216-201ENST00000389900 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
RNF216-201ENST00000389900 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
RNF216-201ENST00000389900 MSH5O43196 834 aa13.07□□□□□ -0.32
RNF216-201ENST00000389900 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
RNF216-201ENST00000389900 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
RNF216-201ENST00000389900 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
RNF216-201ENST00000389900 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
RNF216-201ENST00000389900 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
RNF216-201ENST00000389900 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
RNF216-201ENST00000389900 PDS5BQ9NTI5 1447 aa13.04□□□□□ -0.32
RNF216-201ENST00000389900 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
RNF216-201ENST00000389900 MRC2Q9UBG0 1479 aa12.94□□□□□ -0.34
RNF216-201ENST00000389900 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
RNF216-201ENST00000389900 WDR62O43379 1518 aa12.92□□□□□ -0.34
RNF216-201ENST00000389900 SOGA1O94964 1423 aa12.92□□□□□ -0.34
RNF216-201ENST00000389900 SYNJ1O43426 1573 aa12.91□□□□□ -0.34
RNF216-201ENST00000389900 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
RNF216-201ENST00000389900 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
RNF216-201ENST00000389900 CFTRP13569 1480 aa12.89□□□□□ -0.35
RNF216-201ENST00000389900 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
RNF216-201ENST00000389900 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
RNF216-201ENST00000389900 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
RNF216-201ENST00000389900 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
RNF216-201ENST00000389900 CEP162Q5TB80 1403 aa12.86□□□□□ -0.35
RNF216-201ENST00000389900 UBTFP17480 764 aaKnown RBP12.86□□□□□ -0.35
RNF216-201ENST00000389900 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
RNF216-201ENST00000389900 CDK11BP21127 795 aaKnown RBP12.86□□□□□ -0.35
RNF216-201ENST00000389900 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
RNF216-201ENST00000389900 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
RNF216-201ENST00000389900 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
RNF216-201ENST00000389900 RUSC2Q8N2Y8 1516 aa12.83□□□□□ -0.36
RNF216-201ENST00000389900 KIF21BO75037 1637 aa12.83□□□□□ -0.36
RNF216-201ENST00000389900 CHMP4BQ9H444 224 aaKnown RBP12.83□□□□□ -0.36
RNF216-201ENST00000389900 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
RNF216-201ENST00000389900 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
RNF216-201ENST00000389900 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
RNF216-201ENST00000389900 CCER1Q8TC90 406 aaPredicted RBP12.8□□□□□ -0.36
RNF216-201ENST00000389900 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
RNF216-201ENST00000389900 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
RNF216-201ENST00000389900 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
RNF216-201ENST00000389900 NBR1Q14596 966 aa12.77□□□□□ -0.37
RNF216-201ENST00000389900 KCNA4P22459 653 aa12.76□□□□□ -0.37
RNF216-201ENST00000389900 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
RNF216-201ENST00000389900 CUX1P39880 1505 aa12.76□□□□□ -0.37
RNF216-201ENST00000389900 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
RNF216-201ENST00000389900 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
RNF216-201ENST00000389900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNF216-201ENST00000389900 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
RNF216-201ENST00000389900 HSP90AA2PQ14568 343 aaPredicted RBP12.69□□□□□ -0.38
RNF216-201ENST00000389900 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
RNF216-201ENST00000389900 MIER1Q8N108 512 aa12.69□□□□□ -0.38
RNF216-201ENST00000389900 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
RNF216-201ENST00000389900 BCANQ96GW7 911 aa12.68□□□□□ -0.38
RNF216-201ENST00000389900 POLR3GLQ9BT43 218 aa12.68□□□□□ -0.38
RNF216-201ENST00000389900 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
RNF216-201ENST00000389900 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
RNF216-201ENST00000389900 GTF2E1P29083 439 aaPredicted RBP12.66□□□□□ -0.38
RNF216-201ENST00000389900 CLIP1P30622 1438 aa12.66□□□□□ -0.38
RNF216-201ENST00000389900 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
RNF216-201ENST00000389900 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
RNF216-201ENST00000389900 TOPBP1Q92547 1522 aa12.65□□□□□ -0.38
RNF216-201ENST00000389900 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
RNF216-201ENST00000389900 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
RNF216-201ENST00000389900 TEX2Q8IWB9 1127 aa12.64□□□□□ -0.39
RNF216-201ENST00000389900 SECISBP2LQ93073 1101 aaKnown RBP12.64□□□□□ -0.39
RNF216-201ENST00000389900 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
RNF216-201ENST00000389900 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
RNF216-201ENST00000389900 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
RNF216-201ENST00000389900 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
RNF216-201ENST00000389900 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
RNF216-201ENST00000389900 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
RNF216-201ENST00000389900 CNGB1Q14028 1251 aaPredicted RBP12.6□□□□□ -0.39
RNF216-201ENST00000389900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
RNF216-201ENST00000389900 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
RNF216-201ENST00000389900 CNPY4Q8N129 248 aa12.58□□□□□ -0.4
RNF216-201ENST00000389900 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
RNF216-201ENST00000389900 NOP58Q9Y2X3 529 aaKnown RBP12.56□□□□□ -0.4
RNF216-201ENST00000389900 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
RNF216-201ENST00000389900 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
RNF216-201ENST00000389900 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■■■■■ 27.3
RNF216-201ENST00000389900 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
RNF216-201ENST00000389900 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
RNF216-201ENST00000389900 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
RNF216-201ENST00000389900 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms