RNA–Protein interactions for RNA: ENST00000382254.5

CDH12-201, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH12, Length 4,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-201ENST00000382254 VPS8Q8N3P4 1428 aa10.07□□□□□ -0.8
CDH12-201ENST00000382254 SENP3-EIF4A1A0A087X0R7 540 aa10.05□□□□□ -0.8
CDH12-201ENST00000382254 BAZ1BQ9UIG0 1483 aaKnown RBP10.04□□□□□ -0.8
CDH12-201ENST00000382254 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
CDH12-201ENST00000382254 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
CDH12-201ENST00000382254 TOP2AP11388 1531 aaKnown RBP10.02□□□□□ -0.81
CDH12-201ENST00000382254 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDH12-201ENST00000382254 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
CDH12-201ENST00000382254 AEBP2Q6ZN18 517 aaPredicted RBP10□□□□□ -0.81
CDH12-201ENST00000382254 B4GALNT3Q6L9W6 998 aa10□□□□□ -0.81
CDH12-201ENST00000382254 CCNB3Q8WWL7 1395 aa10□□□□□ -0.81
CDH12-201ENST00000382254 RAPGEF2Q9Y4G8 1499 aa9.99□□□□□ -0.81
CDH12-201ENST00000382254 PPP4R2Q9NY27 417 aa9.99□□□□□ -0.81
CDH12-201ENST00000382254 RRP7BPQ9NSQ0 103 aa9.98□□□□□ -0.81
CDH12-201ENST00000382254 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
CDH12-201ENST00000382254 KIF27Q86VH2 1401 aa9.98□□□□□ -0.81
CDH12-201ENST00000382254 MTUS2Q5JR59 1369 aa9.98□□□□□ -0.81
CDH12-201ENST00000382254 CCER2I3L3R5 266 aa9.95□□□□□ -0.82
CDH12-201ENST00000382254 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
CDH12-201ENST00000382254 DEKP35659 375 aaKnown RBP9.95□□□□□ -0.82
CDH12-201ENST00000382254 CANXP27824 592 aaKnown RBP9.95□□□□□ -0.82
CDH12-201ENST00000382254 NOP58Q9Y2X3 529 aaKnown RBP9.95□□□□□ -0.82
CDH12-201ENST00000382254 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
CDH12-201ENST00000382254 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
CDH12-201ENST00000382254 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
CDH12-201ENST00000382254 RAB3GAP2Q9H2M9 1393 aa9.92□□□□□ -0.82
CDH12-201ENST00000382254 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
CDH12-201ENST00000382254 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
CDH12-201ENST00000382254 FBLN2P98095 1184 aa9.9□□□□□ -0.82
CDH12-201ENST00000382254 KDM2AQ9Y2K7 1162 aa9.9□□□□□ -0.82
CDH12-201ENST00000382254 ARXQ96QS3 562 aa9.89□□□□□ -0.83
CDH12-201ENST00000382254 SETD5Q9C0A6 1442 aa9.89□□□□□ -0.83
CDH12-201ENST00000382254 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
CDH12-201ENST00000382254 CUX2O14529 1486 aa9.87□□□□□ -0.83
CDH12-201ENST00000382254 CARMIL1Q5VZK9 1371 aa9.87□□□□□ -0.83
CDH12-201ENST00000382254 NEFMP07197 916 aa9.86□□□□□ -0.83
CDH12-201ENST00000382254 PPP1R15AO75807 674 aaPredicted RBP9.86□□□□□ -0.83
CDH12-201ENST00000382254 HSPA5P11021 654 aaKnown RBP9.84□□□□□ -0.83
CDH12-201ENST00000382254 ATAD2BQ9ULI0 1458 aa9.83□□□□□ -0.84
CDH12-201ENST00000382254 PPM1GO15355 546 aaPredicted RBP9.82□□□□□ -0.84
CDH12-201ENST00000382254 UPF2Q9HAU5 1272 aaKnown RBP9.81□□□□□ -0.84
CDH12-201ENST00000382254 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
CDH12-201ENST00000382254 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.81□□□□□ -0.84
CDH12-201ENST00000382254 KIF21BO75037 1637 aa9.8□□□□□ -0.84
CDH12-201ENST00000382254 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
CDH12-201ENST00000382254 FOXD1Q16676 465 aa9.8□□□□□ -0.84
CDH12-201ENST00000382254 WDR43Q15061 677 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDH12-201ENST00000382254 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
CDH12-201ENST00000382254 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
CDH12-201ENST00000382254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDH12-201ENST00000382254 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
CDH12-201ENST00000382254 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
CDH12-201ENST00000382254 RGS3P49796 1198 aa9.75□□□□□ -0.85
CDH12-201ENST00000382254 GLIPR1L2Q4G1C9 344 aa9.75□□□□□ -0.85
CDH12-201ENST00000382254 FHOD3Q2V2M9 1422 aa9.75□□□□□ -0.85
CDH12-201ENST00000382254 RGL3Q3MIN7 710 aa9.75□□□□□ -0.85
CDH12-201ENST00000382254 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
CDH12-201ENST00000382254 ARHGAP35Q9NRY4 1499 aa9.75□□□□□ -0.85
CDH12-201ENST00000382254 TSPY4P0CV99 314 aa9.74□□□□□ -0.85
CDH12-201ENST00000382254 TSPY10P0CW01 314 aa9.74□□□□□ -0.85
CDH12-201ENST00000382254 ARAP1Q96P48 1450 aa9.74□□□□□ -0.85
CDH12-201ENST00000382254 IPO9Q96P70 1041 aaKnown RBP9.74□□□□□ -0.85
CDH12-201ENST00000382254 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.73□□□□□ -0.85
CDH12-201ENST00000382254 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.85
CDH12-201ENST00000382254 BECN1Q14457 450 aa9.71□□□□□ -0.86
CDH12-201ENST00000382254 PHLDB1Q86UU1 1377 aa9.7□□□□□ -0.86
CDH12-201ENST00000382254 L3MBTL2Q969R5 705 aa9.7□□□□□ -0.86
CDH12-201ENST00000382254 NUDCQ9Y266 331 aa9.7□□□□□ -0.86
CDH12-201ENST00000382254 TDRD9Q8NDG6 1382 aaKnown RBP9.69□□□□□ -0.86
CDH12-201ENST00000382254 IGF1RP08069 1367 aa9.69□□□□□ -0.86
CDH12-201ENST00000382254 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
CDH12-201ENST00000382254 CFDP1Q9UEE9 299 aaPredicted RBP9.69□□□□□ -0.86
CDH12-201ENST00000382254 MPHOSPH9Q99550 1183 aa9.68□□□□□ -0.86
CDH12-201ENST00000382254 PRKRIP1Q9H875 184 aaPredicted RBP9.68□□□□□ -0.86
CDH12-201ENST00000382254 CHGAP10645 457 aaKnown RBP9.67□□□□□ -0.86
CDH12-201ENST00000382254 RCAN3Q9UKA8 241 aa9.67□□□□□ -0.86
CDH12-201ENST00000382254 TCERG1O14776 1098 aaKnown RBP9.67□□□□□ -0.86
CDH12-201ENST00000382254 RRBP1Q9P2E9 1410 aaKnown RBP9.66□□□□□ -0.86
CDH12-201ENST00000382254 PRXQ9BXM0 1461 aa9.65□□□□□ -0.86
CDH12-201ENST00000382254 DCAF11Q8TEB1 546 aa9.65□□□□□ -0.87
CDH12-201ENST00000382254 KNSTRNQ9Y448 316 aa9.65□□□□□ -0.87
CDH12-201ENST00000382254 CADPSQ9ULU8 1353 aa9.65□□□□□ -0.87
CDH12-201ENST00000382254 EIF4G1Q04637 1599 aaKnown RBP9.64□□□□□ -0.87
CDH12-201ENST00000382254 ZBED9Q6R2W3 1325 aa9.64□□□□□ -0.87
CDH12-201ENST00000382254 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
CDH12-201ENST00000382254 NEUROD2Q15784 382 aa9.64□□□□□ -0.87
CDH12-201ENST00000382254 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
CDH12-201ENST00000382254 CHMP7Q8WUX9 453 aaPredicted RBP9.63□□□□□ -0.87
CDH12-201ENST00000382254 TRIM44Q96DX7 344 aaPredicted RBP9.63□□□□□ -0.87
CDH12-201ENST00000382254 FRAT1Q92837 279 aaPredicted RBP9.62□□□□□ -0.87
CDH12-201ENST00000382254 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
CDH12-201ENST00000382254 MSH5O43196 834 aa9.62□□□□□ -0.87
CDH12-201ENST00000382254 PKD2Q13563 968 aa9.61□□□□□ -0.87
CDH12-201ENST00000382254 CCDC18Q5T9S5 1454 aa9.61□□□□□ -0.87
CDH12-201ENST00000382254 PDE4AP27815 886 aa9.6□□□□□ -0.87
CDH12-201ENST00000382254 EXOC6Q8TAG9 804 aa9.6□□□□□ -0.87
CDH12-201ENST00000382254 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
CDH12-201ENST00000382254 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
CDH12-201ENST00000382254 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
CDH12-201ENST00000382254 ERICH3Q5RHP9 1530 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms