RNA–Protein interactions for RNA: ENST00000382194.6

SMARCA2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-208ENST00000382194 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
SMARCA2-208ENST00000382194 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
SMARCA2-208ENST00000382194 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
SMARCA2-208ENST00000382194 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
SMARCA2-208ENST00000382194 BECN1Q14457 450 aa18.37■□□□□ 0.53
SMARCA2-208ENST00000382194 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
SMARCA2-208ENST00000382194 FKBP8Q14318 412 aa18.35■□□□□ 0.53
SMARCA2-208ENST00000382194 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■■■■□ 21.2
SMARCA2-208ENST00000382194 MTUS2Q5JR59 1369 aa18.34■□□□□ 0.53
SMARCA2-208ENST00000382194 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
SMARCA2-208ENST00000382194 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
SMARCA2-208ENST00000382194 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
SMARCA2-208ENST00000382194 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
SMARCA2-208ENST00000382194 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
SMARCA2-208ENST00000382194 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.52
SMARCA2-208ENST00000382194 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
SMARCA2-208ENST00000382194 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
SMARCA2-208ENST00000382194 TRIM44Q96DX7 344 aaPredicted RBP18.25■□□□□ 0.51
SMARCA2-208ENST00000382194 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
SMARCA2-208ENST00000382194 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
SMARCA2-208ENST00000382194 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
SMARCA2-208ENST00000382194 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
SMARCA2-208ENST00000382194 PTMAP06454 111 aaKnown RBP18.2■□□□□ 0.5
SMARCA2-208ENST00000382194 POGKQ9P215 609 aa18.2■□□□□ 0.5
SMARCA2-208ENST00000382194 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
SMARCA2-208ENST00000382194 NRDCO43847 1150 aa18.19■□□□□ 0.5
SMARCA2-208ENST00000382194 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
SMARCA2-208ENST00000382194 FGD1P98174 961 aa18.18■□□□□ 0.5
SMARCA2-208ENST00000382194 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
SMARCA2-208ENST00000382194 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
SMARCA2-208ENST00000382194 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
SMARCA2-208ENST00000382194 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
SMARCA2-208ENST00000382194 OS9Q13438 667 aaPredicted RBP18.17■□□□□ 0.5
SMARCA2-208ENST00000382194 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
SMARCA2-208ENST00000382194 CLSTN1O94985 981 aa18.14■□□□□ 0.49
SMARCA2-208ENST00000382194 MS4A1P11836 297 aa18.13■□□□□ 0.49
SMARCA2-208ENST00000382194 TMX4Q9H1E5 349 aaPredicted RBP18.12■□□□□ 0.49
SMARCA2-208ENST00000382194 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
SMARCA2-208ENST00000382194 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
SMARCA2-208ENST00000382194 KCNJ4P48050 445 aa18.09■□□□□ 0.49
SMARCA2-208ENST00000382194 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
SMARCA2-208ENST00000382194 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
SMARCA2-208ENST00000382194 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
SMARCA2-208ENST00000382194 DNTTIP2Q5QJE6 756 aaKnown RBP18.06■□□□□ 0.48
SMARCA2-208ENST00000382194 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
SMARCA2-208ENST00000382194 NBR1Q14596 966 aa18.06■□□□□ 0.48
SMARCA2-208ENST00000382194 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
SMARCA2-208ENST00000382194 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
SMARCA2-208ENST00000382194 NAP1L2Q9ULW6 460 aaPredicted RBP18.03■□□□□ 0.48
SMARCA2-208ENST00000382194 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
SMARCA2-208ENST00000382194 GOLGA6L4A6NEF3 574 aa18■□□□□ 0.47
SMARCA2-208ENST00000382194 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
SMARCA2-208ENST00000382194 KANK1Q14678 1352 aa17.99■□□□□ 0.47
SMARCA2-208ENST00000382194 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
SMARCA2-208ENST00000382194 CHAF1AQ13111 956 aaPredicted RBP17.96■□□□□ 0.47
SMARCA2-208ENST00000382194 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.46
SMARCA2-208ENST00000382194 CHMP4AQ9BY43 222 aa17.95■□□□□ 0.46
SMARCA2-208ENST00000382194 MCCP23508 829 aa17.95■□□□□ 0.46
SMARCA2-208ENST00000382194 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
SMARCA2-208ENST00000382194 TPRNQ4KMQ1 711 aa17.93■□□□□ 0.46
SMARCA2-208ENST00000382194 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
SMARCA2-208ENST00000382194 PLCB2Q00722 1185 aa17.92■□□□□ 0.46
SMARCA2-208ENST00000382194 U2SURPO15042 1029 aaKnown RBP17.91■□□□□ 0.46
SMARCA2-208ENST00000382194 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
SMARCA2-208ENST00000382194 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
SMARCA2-208ENST00000382194 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
SMARCA2-208ENST00000382194 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
SMARCA2-208ENST00000382194 PRM3Q9NNZ6 103 aa17.87■□□□□ 0.45
SMARCA2-208ENST00000382194 CSB-PGBD3P0DP91 1061 aa17.86■□□□□ 0.45
SMARCA2-208ENST00000382194 CLIP1P30622 1438 aa17.85■□□□□ 0.45
SMARCA2-208ENST00000382194 FRAT1Q92837 279 aaPredicted RBP17.85■□□□□ 0.45
SMARCA2-208ENST00000382194 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
SMARCA2-208ENST00000382194 G3V3G9 751 aa17.84■□□□□ 0.45
SMARCA2-208ENST00000382194 DCAF8Q5TAQ9 597 aa17.84■□□□□ 0.45
SMARCA2-208ENST00000382194 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
SMARCA2-208ENST00000382194 MLECQ14165 292 aa17.83■□□□□ 0.44
SMARCA2-208ENST00000382194 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.44
SMARCA2-208ENST00000382194 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.44
SMARCA2-208ENST00000382194 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
SMARCA2-208ENST00000382194 CCDC34Q96HJ3 373 aa17.81■□□□□ 0.44
SMARCA2-208ENST00000382194 HDAC5Q9UQL6 1122 aa17.81■□□□□ 0.44
SMARCA2-208ENST00000382194 TMF1P82094 1093 aa17.81■□□□□ 0.44
SMARCA2-208ENST00000382194 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
SMARCA2-208ENST00000382194 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
SMARCA2-208ENST00000382194 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
SMARCA2-208ENST00000382194 KIAA1211Q6ZU35 1233 aa17.79■□□□□ 0.44
SMARCA2-208ENST00000382194 SOX12O15370 315 aa17.76■□□□□ 0.43
SMARCA2-208ENST00000382194 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
SMARCA2-208ENST00000382194 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
SMARCA2-208ENST00000382194 KRI1Q8N9T8 703 aaKnown RBP17.75■□□□□ 0.43
SMARCA2-208ENST00000382194 NOC3LQ8WTT2 800 aaKnown RBP17.75■□□□□ 0.43
SMARCA2-208ENST00000382194 EEA1Q15075 1411 aa17.74■□□□□ 0.43
SMARCA2-208ENST00000382194 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
SMARCA2-208ENST00000382194 MORC1Q86VD1 984 aa17.73■□□□□ 0.43
SMARCA2-208ENST00000382194 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
SMARCA2-208ENST00000382194 GORABQ5T7V8 394 aa17.73■□□□□ 0.43
SMARCA2-208ENST00000382194 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
SMARCA2-208ENST00000382194 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
SMARCA2-208ENST00000382194 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
SMARCA2-208ENST00000382194 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms