RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 STAG3Q9UJ98 1225 aa8.78□□□□□ -1
RFX3-203ENST00000381984 MAMSTRQ6ZN01 415 aa8.77□□□□□ -1.01
RFX3-203ENST00000381984 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
RFX3-203ENST00000381984 MS4A3Q96HJ5 214 aa8.77□□□□□ -1.01
RFX3-203ENST00000381984 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
RFX3-203ENST00000381984 NPM1P06748 294 aaKnown RBP eCLIP8.71□□□□□ -1.02
RFX3-203ENST00000381984 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
RFX3-203ENST00000381984 ATN1P54259 1190 aaPredicted RBP8.68□□□□□ -1.02
RFX3-203ENST00000381984 SCUBE2Q9NQ36 999 aa8.68□□□□□ -1.02
RFX3-203ENST00000381984 CDAN1Q8IWY9 1227 aa8.64□□□□□ -1.03
RFX3-203ENST00000381984 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
RFX3-203ENST00000381984 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
RFX3-203ENST00000381984 SPDYE4A6NLX3 237 aa8.58□□□□□ -1.04
RFX3-203ENST00000381984 BMP2KQ9NSY1 1161 aaPredicted RBP8.58□□□□□ -1.04
RFX3-203ENST00000381984 TRPC6Q9Y210 931 aa8.58□□□□□ -1.04
RFX3-203ENST00000381984 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
RFX3-203ENST00000381984 CCDC61Q9Y6R9 512 aa8.57□□□□□ -1.04
RFX3-203ENST00000381984 COLQQ9Y215 455 aaPredicted RBP8.55□□□□□ -1.04
RFX3-203ENST00000381984 ST18O60284 1047 aa8.5□□□□□ -1.05
RFX3-203ENST00000381984 TIE1P35590 1138 aa8.49□□□□□ -1.05
RFX3-203ENST00000381984 MAP3K13O43283 966 aa8.48□□□□□ -1.05
RFX3-203ENST00000381984 MMRN1Q13201 1228 aa8.48□□□□□ -1.05
RFX3-203ENST00000381984 SEC24BO95487 1268 aa8.47□□□□□ -1.05
RFX3-203ENST00000381984 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
RFX3-203ENST00000381984 SPNS2Q8IVW8 549 aa8.46□□□□□ -1.06
RFX3-203ENST00000381984 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
RFX3-203ENST00000381984 CSRNP3Q8WYN3 585 aa8.43□□□□□ -1.06
RFX3-203ENST00000381984 IER5LQ5T953 404 aa8.39□□□□□ -1.07
RFX3-203ENST00000381984 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
RFX3-203ENST00000381984 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
RFX3-203ENST00000381984 PROM2Q8N271 834 aa8.31□□□□□ -1.08
RFX3-203ENST00000381984 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
RFX3-203ENST00000381984 SGIP1Q9BQI5 828 aa8.3□□□□□ -1.08
RFX3-203ENST00000381984 TMEM121BQ9BXQ6 578 aaPredicted RBP8.3□□□□□ -1.08
RFX3-203ENST00000381984 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
RFX3-203ENST00000381984 IRX5P78411 483 aaPredicted RBP8.27□□□□□ -1.09
RFX3-203ENST00000381984 PLCG2P16885 1265 aa8.26□□□□□ -1.09
RFX3-203ENST00000381984 IFNL1Q8IU54 200 aa8.26□□□□□ -1.09
RFX3-203ENST00000381984 MIER1Q8N108 512 aa8.26□□□□□ -1.09
RFX3-203ENST00000381984 TMEM106CQ9BVX2 250 aa8.25□□□□□ -1.09
RFX3-203ENST00000381984 SNPHO15079 494 aa8.23□□□□□ -1.09
RFX3-203ENST00000381984 POTEB3A0JP26 581 aa8.22□□□□□ -1.09
RFX3-203ENST00000381984 POTEBQ6S5H4 581 aa8.22□□□□□ -1.09
RFX3-203ENST00000381984 PLEKHG5O94827 1062 aa8.2□□□□□ -1.1
RFX3-203ENST00000381984 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
RFX3-203ENST00000381984 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
RFX3-203ENST00000381984 OCEL1Q9H607 264 aa8.2□□□□□ -1.1
RFX3-203ENST00000381984 NUBP1P53384 320 aa8.18□□□□□ -1.1
RFX3-203ENST00000381984 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.18□□□□□ -1.1
RFX3-203ENST00000381984 EMP3P54852 163 aa8.14□□□□□ -1.11
RFX3-203ENST00000381984 HS3ST6Q96QI5 342 aa8.14□□□□□ -1.11
RFX3-203ENST00000381984 FAM205CA6NFA0 338 aa8.12□□□□□ -1.11
RFX3-203ENST00000381984 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
RFX3-203ENST00000381984 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
RFX3-203ENST00000381984 FAM212AQ96EL1 285 aa8.05□□□□□ -1.12
RFX3-203ENST00000381984 PCDHB8Q9UN66 801 aa8.05□□□□□ -1.12
RFX3-203ENST00000381984 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
RFX3-203ENST00000381984 PYGBP11216 843 aa8.02□□□□□ -1.13
RFX3-203ENST00000381984 ZBTB47Q9UFB7 747 aaPredicted RBP8.01□□□□□ -1.13
RFX3-203ENST00000381984 L3MBTL3Q96JM7 780 aaPredicted RBP8□□□□□ -1.13
RFX3-203ENST00000381984 DCAF8Q5TAQ9 597 aa7.98□□□□□ -1.13
RFX3-203ENST00000381984 HOXB3P14651 431 aaPredicted RBP7.96□□□□□ -1.14
RFX3-203ENST00000381984 RNF166Q96A37 237 aaPredicted RBP7.96□□□□□ -1.14
RFX3-203ENST00000381984 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
RFX3-203ENST00000381984 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.93□□□□□ -1.144e-6■□□□□ 11.2
RFX3-203ENST00000381984 HOXB1P14653 301 aaPredicted RBP7.92□□□□□ -1.14
RFX3-203ENST00000381984 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
RFX3-203ENST00000381984 ERBB3P21860 1342 aa7.9□□□□□ -1.14
RFX3-203ENST00000381984 MYT1LQ9UL68 1186 aa7.9□□□□□ -1.14
RFX3-203ENST00000381984 GOLGA2Q08379 1002 aa7.89□□□□□ -1.15
RFX3-203ENST00000381984 ILDR1Q86SU0 546 aaPredicted RBP7.89□□□□□ -1.15
RFX3-203ENST00000381984 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
RFX3-203ENST00000381984 ZNF467Q7Z7K2 595 aaPredicted RBP7.84□□□□□ -1.15
RFX3-203ENST00000381984 PSEN1P49768 467 aa7.83□□□□□ -1.16
RFX3-203ENST00000381984 VARS2Q5ST30 1063 aaKnown RBP7.83□□□□□ -1.16
RFX3-203ENST00000381984 DOK7Q18PE1 504 aa7.81□□□□□ -1.16
RFX3-203ENST00000381984 ZNF687Q8N1G0 1237 aa7.81□□□□□ -1.16
RFX3-203ENST00000381984 BOLA1Q9Y3E2 137 aa7.81□□□□□ -1.16
RFX3-203ENST00000381984 CHRM1P11229 460 aaPredicted RBP7.78□□□□□ -1.16
RFX3-203ENST00000381984 G3V3G9 751 aa7.76□□□□□ -1.17
RFX3-203ENST00000381984 PTGER2P43116 358 aa7.74□□□□□ -1.17
RFX3-203ENST00000381984 GSE1Q14687 1217 aa7.74□□□□□ -1.17
RFX3-203ENST00000381984 RIMBP2O15034 1052 aa7.73□□□□□ -1.17
RFX3-203ENST00000381984 GPR153Q6NV75 609 aa7.73□□□□□ -1.17
RFX3-203ENST00000381984 ANKRD13DQ6ZTN6 518 aa7.73□□□□□ -1.17
RFX3-203ENST00000381984 CABP2Q9NPB3 220 aa7.73□□□□□ -1.17
RFX3-203ENST00000381984 PDAP1Q13442 181 aaKnown RBP7.72□□□□□ -1.17
RFX3-203ENST00000381984 FKBP8Q14318 412 aa7.71□□□□□ -1.18
RFX3-203ENST00000381984 TMEM92Q6UXU6 159 aa7.71□□□□□ -1.18
RFX3-203ENST00000381984 ZSWIM6Q9HCJ5 1215 aa7.7□□□□□ -1.18
RFX3-203ENST00000381984 PLA2G2EQ9NZK7 142 aa7.67□□□□□ -1.18
RFX3-203ENST00000381984 ARSIQ5FYB1 569 aa7.65□□□□□ -1.18
RFX3-203ENST00000381984 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
RFX3-203ENST00000381984 LSM11P83369 360 aaKnown RBP eCLIP7.64□□□□□ -1.19
RFX3-203ENST00000381984 KHSRPQ92945 711 aaKnown RBP eCLIP7.62□□□□□ -1.19
RFX3-203ENST00000381984 ZNF316A6NFI3 1004 aaPredicted RBP7.61□□□□□ -1.19
RFX3-203ENST00000381984 MICALL2Q8IY33 904 aa7.61□□□□□ -1.19
RFX3-203ENST00000381984 EFCAB3Q8N7B9 438 aa7.61□□□□□ -1.19
RFX3-203ENST00000381984 POTEEQ6S8J3 1075 aa7.58□□□□□ -1.2
RFX3-203ENST00000381984 HCSTQ9UBK5 93 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms