RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 FAM9AQ8IZU1 332 aaPredicted RBP9.87□□□□□ -0.83
CDKAL1-202ENST00000378610 SCRIBQ14160 1630 aa9.86□□□□□ -0.83
CDKAL1-202ENST00000378610 MIER1Q8N108 512 aa9.83□□□□□ -0.84
CDKAL1-202ENST00000378610 BAZ1AQ9NRL2 1556 aaPredicted RBP9.82□□□□□ -0.84
CDKAL1-202ENST00000378610 SUPT16HQ9Y5B9 1047 aaKnown RBP9.82□□□□□ -0.84
CDKAL1-202ENST00000378610 MYCNP04198 464 aaPredicted RBP9.81□□□□□ -0.84
CDKAL1-202ENST00000378610 TRHP20396 242 aaPredicted RBP9.81□□□□□ -0.84
CDKAL1-202ENST00000378610 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
CDKAL1-202ENST00000378610 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
CDKAL1-202ENST00000378610 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
CDKAL1-202ENST00000378610 TNIKQ9UKE5 1360 aa9.76□□□□□ -0.85
CDKAL1-202ENST00000378610 WIZO95785 1651 aa9.75□□□□□ -0.85
CDKAL1-202ENST00000378610 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
CDKAL1-202ENST00000378610 MROH2BQ7Z745 1585 aa9.73□□□□□ -0.85
CDKAL1-202ENST00000378610 CCDC9Q9Y3X0 531 aaKnown RBP9.72□□□□□ -0.85
CDKAL1-202ENST00000378610 ARID3AQ99856 593 aa9.71□□□□□ -0.85
CDKAL1-202ENST00000378610 EEA1Q15075 1411 aa9.71□□□□□ -0.86
CDKAL1-202ENST00000378610 RGL2O15211 777 aa9.71□□□□□ -0.86
CDKAL1-202ENST00000378610 YTHDC1Q96MU7 727 aaKnown RBP9.69□□□□□ -0.86
CDKAL1-202ENST00000378610 RNF216Q9NWF9 866 aaPredicted RBP9.69□□□□□ -0.86
CDKAL1-202ENST00000378610 TOP2AP11388 1531 aaKnown RBP9.68□□□□□ -0.86
CDKAL1-202ENST00000378610 KIF21BO75037 1637 aa9.68□□□□□ -0.86
CDKAL1-202ENST00000378610 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
CDKAL1-202ENST00000378610 IGSF3O75054 1194 aa9.65□□□□□ -0.86
CDKAL1-202ENST00000378610 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.86
CDKAL1-202ENST00000378610 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.86
CDKAL1-202ENST00000378610 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
CDKAL1-202ENST00000378610 CUX2O14529 1486 aa9.64□□□□□ -0.87
CDKAL1-202ENST00000378610 SMARCA4P51532 1647 aa9.63□□□□□ -0.87
CDKAL1-202ENST00000378610 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
CDKAL1-202ENST00000378610 PEG3Q9GZU2 1588 aa9.62□□□□□ -0.87
CDKAL1-202ENST00000378610 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
CDKAL1-202ENST00000378610 C1orf115Q9H7X2 142 aa9.62□□□□□ -0.87
CDKAL1-202ENST00000378610 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
CDKAL1-202ENST00000378610 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
CDKAL1-202ENST00000378610 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
CDKAL1-202ENST00000378610 ZBTB7CA1YPR0 619 aa9.6□□□□□ -0.87
CDKAL1-202ENST00000378610 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
CDKAL1-202ENST00000378610 PROM2Q8N271 834 aa9.59□□□□□ -0.87
CDKAL1-202ENST00000378610 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
CDKAL1-202ENST00000378610 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
CDKAL1-202ENST00000378610 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
CDKAL1-202ENST00000378610 DHX57Q6P158 1386 aaKnown RBP9.57□□□□□ -0.88
CDKAL1-202ENST00000378610 BAZ1BQ9UIG0 1483 aaKnown RBP9.57□□□□□ -0.88
CDKAL1-202ENST00000378610 SOGA1O94964 1423 aa9.57□□□□□ -0.88
CDKAL1-202ENST00000378610 VPS8Q8N3P4 1428 aa9.55□□□□□ -0.88
CDKAL1-202ENST00000378610 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
CDKAL1-202ENST00000378610 FANCIQ9NVI1 1328 aa9.53□□□□□ -0.88
CDKAL1-202ENST00000378610 CLIP1P30622 1438 aa9.52□□□□□ -0.88
CDKAL1-202ENST00000378610 RUSC2Q8N2Y8 1516 aa9.52□□□□□ -0.88
CDKAL1-202ENST00000378610 MSH5O43196 834 aa9.52□□□□□ -0.89
CDKAL1-202ENST00000378610 LMOD2Q6P5Q4 547 aa9.52□□□□□ -0.89
CDKAL1-202ENST00000378610 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
CDKAL1-202ENST00000378610 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.89
CDKAL1-202ENST00000378610 CDK11BP21127 795 aaKnown RBP9.5□□□□□ -0.89
CDKAL1-202ENST00000378610 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
CDKAL1-202ENST00000378610 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
CDKAL1-202ENST00000378610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDKAL1-202ENST00000378610 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
CDKAL1-202ENST00000378610 SYNJ1O43426 1573 aa9.48□□□□□ -0.89
CDKAL1-202ENST00000378610 ARID3CA6NKF2 412 aa9.47□□□□□ -0.89
CDKAL1-202ENST00000378610 MAPKBP1O60336 1514 aa9.47□□□□□ -0.89
CDKAL1-202ENST00000378610 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
CDKAL1-202ENST00000378610 CHMP4AQ9BY43 222 aa9.47□□□□□ -0.89
CDKAL1-202ENST00000378610 HOXD11P31277 338 aaPredicted RBP9.45□□□□□ -0.9
CDKAL1-202ENST00000378610 BICRAQ9NZM4 1560 aa9.43□□□□□ -0.9
CDKAL1-202ENST00000378610 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
CDKAL1-202ENST00000378610 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
CDKAL1-202ENST00000378610 SAMD1Q6SPF0 538 aaPredicted RBP9.4□□□□□ -0.9
CDKAL1-202ENST00000378610 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.9
CDKAL1-202ENST00000378610 SLC24A3Q9HC58 644 aa9.4□□□□□ -0.9
CDKAL1-202ENST00000378610 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
CDKAL1-202ENST00000378610 ARAP1Q96P48 1450 aa9.38□□□□□ -0.91
CDKAL1-202ENST00000378610 KCNH8Q96L42 1107 aa9.38□□□□□ -0.91
CDKAL1-202ENST00000378610 APBB1O00213 710 aa9.38□□□□□ -0.91
CDKAL1-202ENST00000378610 HMGB1P09429 215 aaKnown RBP9.38□□□□□ -0.91
CDKAL1-202ENST00000378610 CCER2I3L3R5 266 aa9.37□□□□□ -0.91
CDKAL1-202ENST00000378610 RAD21O60216 631 aa9.37□□□□□ -0.91
CDKAL1-202ENST00000378610 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
CDKAL1-202ENST00000378610 BIVM-ERCC5R4GMW8 1640 aa9.37□□□□□ -0.91
CDKAL1-202ENST00000378610 WDR97A6NE52 1622 aa9.36□□□□□ -0.91
CDKAL1-202ENST00000378610 ZNF428Q96B54 188 aa9.36□□□□□ -0.91
CDKAL1-202ENST00000378610 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
CDKAL1-202ENST00000378610 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
CDKAL1-202ENST00000378610 ERICH6BQ5W0A0 696 aa9.36□□□□□ -0.91
CDKAL1-202ENST00000378610 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
CDKAL1-202ENST00000378610 HS6ST3Q8IZP7 471 aa9.35□□□□□ -0.91
CDKAL1-202ENST00000378610 RAPGEF2Q9Y4G8 1499 aa9.35□□□□□ -0.91
CDKAL1-202ENST00000378610 RGS22Q8NE09 1264 aa9.34□□□□□ -0.91
CDKAL1-202ENST00000378610 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
CDKAL1-202ENST00000378610 MAP3K1Q13233 1512 aa9.34□□□□□ -0.91
CDKAL1-202ENST00000378610 TOP2BQ02880 1626 aa9.32□□□□□ -0.92
CDKAL1-202ENST00000378610 PUS7Q96PZ0 661 aaKnown RBP9.31□□□□□ -0.92
CDKAL1-202ENST00000378610 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
CDKAL1-202ENST00000378610 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
CDKAL1-202ENST00000378610 PRXQ9BXM0 1461 aa9.3□□□□□ -0.92
CDKAL1-202ENST00000378610 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
CDKAL1-202ENST00000378610 DEKP35659 375 aaKnown RBP9.29□□□□□ -0.92
CDKAL1-202ENST00000378610 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
CDKAL1-202ENST00000378610 PRDM2Q13029 1718 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms