RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 ARXQ96QS3 562 aa19.67■□□□□ 0.74
EXT1-201ENST00000378204 EIF4G2P78344 907 aaKnown RBP eCLIP19.65■□□□□ 0.74
EXT1-201ENST00000378204 BECN1Q14457 450 aa19.62■□□□□ 0.73
EXT1-201ENST00000378204 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
EXT1-201ENST00000378204 RTN4Q9NQC3 1192 aaKnown RBP19.58■□□□□ 0.73
EXT1-201ENST00000378204 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
EXT1-201ENST00000378204 CLIP1P30622 1438 aa19.56■□□□□ 0.72
EXT1-201ENST00000378204 MIER1Q8N108 512 aa19.56■□□□□ 0.72
EXT1-201ENST00000378204 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
EXT1-201ENST00000378204 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
EXT1-201ENST00000378204 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
EXT1-201ENST00000378204 GOLGA6L22H0YM25 854 aa19.52■□□□□ 0.72
EXT1-201ENST00000378204 HIRIP3Q9BW71 556 aaPredicted RBP19.52■□□□□ 0.71
EXT1-201ENST00000378204 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.71
EXT1-201ENST00000378204 PPM1GO15355 546 aaPredicted RBP19.49■□□□□ 0.71
EXT1-201ENST00000378204 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
EXT1-201ENST00000378204 A0A0G2JS52 829 aa19.47■□□□□ 0.71
EXT1-201ENST00000378204 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
EXT1-201ENST00000378204 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
EXT1-201ENST00000378204 PPP1R15AO75807 674 aaPredicted RBP19.45■□□□□ 0.7
EXT1-201ENST00000378204 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
EXT1-201ENST00000378204 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
EXT1-201ENST00000378204 C14orf37Q86TY3 774 aa19.44■□□□□ 0.7
EXT1-201ENST00000378204 EEA1Q15075 1411 aa19.42■□□□□ 0.7
EXT1-201ENST00000378204 CASC1Q6TDU7 716 aa19.41■□□□□ 0.7
EXT1-201ENST00000378204 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
EXT1-201ENST00000378204 GOLGA3Q08378 1498 aa19.4■□□□□ 0.7
EXT1-201ENST00000378204 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
EXT1-201ENST00000378204 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
EXT1-201ENST00000378204 ZRSR1Q15695 479 aaKnown RBP19.39■□□□□ 0.69
EXT1-201ENST00000378204 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
EXT1-201ENST00000378204 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
EXT1-201ENST00000378204 RGL3Q3MIN7 710 aa19.37■□□□□ 0.69
EXT1-201ENST00000378204 KCNH8Q96L42 1107 aa19.35■□□□□ 0.69
EXT1-201ENST00000378204 PTMAP06454 111 aaKnown RBP19.34■□□□□ 0.69
EXT1-201ENST00000378204 TNNT3P45378 269 aaPredicted RBP19.34■□□□□ 0.69
EXT1-201ENST00000378204 PTMSP20962 102 aa19.33■□□□□ 0.69
EXT1-201ENST00000378204 CEP162Q5TB80 1403 aa19.33■□□□□ 0.68
EXT1-201ENST00000378204 PLEKHG5O94827 1062 aa19.32■□□□□ 0.68
EXT1-201ENST00000378204 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
EXT1-201ENST00000378204 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
EXT1-201ENST00000378204 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
EXT1-201ENST00000378204 CARD11Q9BXL7 1154 aa19.28■□□□□ 0.68
EXT1-201ENST00000378204 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
EXT1-201ENST00000378204 NOP58Q9Y2X3 529 aaKnown RBP19.28■□□□□ 0.68
EXT1-201ENST00000378204 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
EXT1-201ENST00000378204 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
EXT1-201ENST00000378204 MAPK8IP3Q9UPT6 1336 aa19.26■□□□□ 0.67
EXT1-201ENST00000378204 CHMP4BQ9H444 224 aaKnown RBP19.26■□□□□ 0.67
EXT1-201ENST00000378204 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
EXT1-201ENST00000378204 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
EXT1-201ENST00000378204 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
EXT1-201ENST00000378204 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
EXT1-201ENST00000378204 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
EXT1-201ENST00000378204 MS4A1P11836 297 aa19.2■□□□□ 0.66
EXT1-201ENST00000378204 PPP4R2Q9NY27 417 aa19.19■□□□□ 0.66
EXT1-201ENST00000378204 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
EXT1-201ENST00000378204 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
EXT1-201ENST00000378204 CALRP27797 417 aaKnown RBP19.19■□□□□ 0.66
EXT1-201ENST00000378204 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
EXT1-201ENST00000378204 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
EXT1-201ENST00000378204 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
EXT1-201ENST00000378204 MSNP26038 577 aaKnown RBP19.17■□□□□ 0.66
EXT1-201ENST00000378204 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
EXT1-201ENST00000378204 HSP90AA2PQ14568 343 aaPredicted RBP19.16■□□□□ 0.66
EXT1-201ENST00000378204 VSIG10Q8N0Z9 540 aa19.16■□□□□ 0.66
EXT1-201ENST00000378204 POGKQ9P215 609 aa19.16■□□□□ 0.66
EXT1-201ENST00000378204 SENP3-EIF4A1A0A087X0R7 540 aa19.15■□□□□ 0.66
EXT1-201ENST00000378204 PODXL2Q9NZ53 605 aa19.15■□□□□ 0.66
EXT1-201ENST00000378204 RGS3P49796 1198 aa19.14■□□□□ 0.65
EXT1-201ENST00000378204 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
EXT1-201ENST00000378204 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
EXT1-201ENST00000378204 TPRNQ4KMQ1 711 aa19.13■□□□□ 0.65
EXT1-201ENST00000378204 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
EXT1-201ENST00000378204 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
EXT1-201ENST00000378204 FGD1P98174 961 aa19.12■□□□□ 0.65
EXT1-201ENST00000378204 GOLGA6L6A8MZA4 724 aa19.11■□□□□ 0.65
EXT1-201ENST00000378204 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
EXT1-201ENST00000378204 NRDCO43847 1150 aa19.09■□□□□ 0.65
EXT1-201ENST00000378204 OS9Q13438 667 aaPredicted RBP19.09■□□□□ 0.65
EXT1-201ENST00000378204 KCNJ4P48050 445 aa19.09■□□□□ 0.65
EXT1-201ENST00000378204 PLCB2Q00722 1185 aa19.07■□□□□ 0.64
EXT1-201ENST00000378204 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
EXT1-201ENST00000378204 U2SURPO15042 1029 aaKnown RBP19.06■□□□□ 0.64
EXT1-201ENST00000378204 CC2D1BQ5T0F9 858 aaKnown RBP19.06■□□□□ 0.64
EXT1-201ENST00000378204 LMOD2Q6P5Q4 547 aa19.06■□□□□ 0.64
EXT1-201ENST00000378204 PRKCSHP14314 528 aaPredicted RBP19.05■□□□□ 0.64
EXT1-201ENST00000378204 NPHP1O15259 732 aa19.05■□□□□ 0.64
EXT1-201ENST00000378204 TMF1P82094 1093 aa19.05■□□□□ 0.64
EXT1-201ENST00000378204 NACADO15069 1562 aa19.05■□□□□ 0.64
EXT1-201ENST00000378204 PKNOX2Q96KN3 472 aa19.04■□□□□ 0.64
EXT1-201ENST00000378204 TULP1O00294 542 aaPredicted RBP19.04■□□□□ 0.64
EXT1-201ENST00000378204 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
EXT1-201ENST00000378204 CCNB3Q8WWL7 1395 aa19.01■□□□□ 0.63
EXT1-201ENST00000378204 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
EXT1-201ENST00000378204 HSCBQ8IWL3 235 aa19.01■□□□□ 0.63
EXT1-201ENST00000378204 CFAP44Q96MT7 982 aa19.01■□□□□ 0.63
EXT1-201ENST00000378204 GOLGA6L4A6NEF3 574 aa19■□□□□ 0.63
EXT1-201ENST00000378204 KANK1Q14678 1352 aa19■□□□□ 0.63
EXT1-201ENST00000378204 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms