RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 C14orf37Q86TY3 774 aa25.18■■□□□ 1.62
TBC1D4-201ENST00000377625 EIF4G2P78344 907 aaKnown RBP eCLIP25.18■■□□□ 1.62
TBC1D4-201ENST00000377625 PPP1R15AO75807 674 aaPredicted RBP25.18■■□□□ 1.62
TBC1D4-201ENST00000377625 RRP7BPQ9NSQ0 103 aa25.17■■□□□ 1.62
TBC1D4-201ENST00000377625 KCNH8Q96L42 1107 aa25.12■■□□□ 1.61
TBC1D4-201ENST00000377625 MIER1Q8N108 512 aa25.09■■□□□ 1.61
TBC1D4-201ENST00000377625 CLIP1P30622 1438 aa25.09■■□□□ 1.61
TBC1D4-201ENST00000377625 CDK11BP21127 795 aaKnown RBP25.09■■□□□ 1.61
TBC1D4-201ENST00000377625 GLIPR1L2Q4G1C9 344 aa25.08■■□□□ 1.61
TBC1D4-201ENST00000377625 RGL3Q3MIN7 710 aa25.04■■□□□ 1.6
TBC1D4-201ENST00000377625 PLEKHD1A6NEE1 506 aa25.03■■□□□ 1.6
TBC1D4-201ENST00000377625 BECN1Q14457 450 aa25■■□□□ 1.59
TBC1D4-201ENST00000377625 NCLP19338 710 aaKnown RBP24.98■■□□□ 1.59
TBC1D4-201ENST00000377625 CFAP53Q96M91 514 aa24.98■■□□□ 1.59
TBC1D4-201ENST00000377625 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
TBC1D4-201ENST00000377625 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
TBC1D4-201ENST00000377625 DDRGK1Q96HY6 314 aa24.95■■□□□ 1.59
TBC1D4-201ENST00000377625 HAP1P54257 671 aaPredicted RBP24.94■■□□□ 1.58
TBC1D4-201ENST00000377625 KNSTRNQ9Y448 316 aa24.92■■□□□ 1.58
TBC1D4-201ENST00000377625 PPM1GO15355 546 aaPredicted RBP24.92■■□□□ 1.58
TBC1D4-201ENST00000377625 CDCA8Q53HL2 280 aa24.91■■□□□ 1.58
TBC1D4-201ENST00000377625 ARID4BQ4LE39 1312 aaPredicted RBP24.9■■□□□ 1.58
TBC1D4-201ENST00000377625 GOLGA6L22H0YM25 854 aa24.89■■□□□ 1.58
TBC1D4-201ENST00000377625 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
TBC1D4-201ENST00000377625 CFDP1Q9UEE9 299 aaPredicted RBP24.86■■□□□ 1.57
TBC1D4-201ENST00000377625 TRIM44Q96DX7 344 aaPredicted RBP24.85■■□□□ 1.57
TBC1D4-201ENST00000377625 FTSJ3Q8IY81 847 aaKnown RBP24.83■■□□□ 1.57
TBC1D4-201ENST00000377625 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
TBC1D4-201ENST00000377625 ANP32EQ9BTT0 268 aa24.83■■□□□ 1.56
TBC1D4-201ENST00000377625 CASC1Q6TDU7 716 aa24.82■■□□□ 1.56
TBC1D4-201ENST00000377625 GOLGA3Q08378 1498 aa24.81■■□□□ 1.56
TBC1D4-201ENST00000377625 NEUROD2Q15784 382 aa24.79■■□□□ 1.56
TBC1D4-201ENST00000377625 ZRSR1Q15695 479 aaKnown RBP24.79■■□□□ 1.56
TBC1D4-201ENST00000377625 LAS1LQ9Y4W2 734 aaKnown RBP24.78■■□□□ 1.56
TBC1D4-201ENST00000377625 MAPK8IP3Q9UPT6 1336 aa24.78■■□□□ 1.56
TBC1D4-201ENST00000377625 CEP162Q5TB80 1403 aa24.76■■□□□ 1.55
TBC1D4-201ENST00000377625 EEA1Q15075 1411 aa24.74■■□□□ 1.55
TBC1D4-201ENST00000377625 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
TBC1D4-201ENST00000377625 POGKQ9P215 609 aa24.73■■□□□ 1.55
TBC1D4-201ENST00000377625 LMOD2Q6P5Q4 547 aa24.72■■□□□ 1.55
TBC1D4-201ENST00000377625 TPRNQ4KMQ1 711 aa24.71■■□□□ 1.55
TBC1D4-201ENST00000377625 SUPT16HQ9Y5B9 1047 aaKnown RBP24.71■■□□□ 1.55
TBC1D4-201ENST00000377625 PTMAP06454 111 aaKnown RBP24.71■■□□□ 1.55
TBC1D4-201ENST00000377625 TNNT2P45379 298 aaPredicted RBP24.65■■□□□ 1.54
TBC1D4-201ENST00000377625 FRAT1Q92837 279 aaPredicted RBP24.64■■□□□ 1.54
TBC1D4-201ENST00000377625 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
TBC1D4-201ENST00000377625 TULP1O00294 542 aaPredicted RBP24.62■■□□□ 1.53
TBC1D4-201ENST00000377625 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
TBC1D4-201ENST00000377625 RGS3P49796 1198 aa24.61■■□□□ 1.53
TBC1D4-201ENST00000377625 NPHP1O15259 732 aa24.59■■□□□ 1.53
TBC1D4-201ENST00000377625 CC2D1BQ5T0F9 858 aaKnown RBP24.59■■□□□ 1.53
TBC1D4-201ENST00000377625 U2SURPO15042 1029 aaKnown RBP24.58■■□□□ 1.52
TBC1D4-201ENST00000377625 DNTTIP2Q5QJE6 756 aaKnown RBP24.58■■□□□ 1.52
TBC1D4-201ENST00000377625 OS9Q13438 667 aaPredicted RBP24.57■■□□□ 1.52
TBC1D4-201ENST00000377625 SIN3AQ96ST3 1273 aa24.57■■□□□ 1.52
TBC1D4-201ENST00000377625 CHMP4BQ9H444 224 aaKnown RBP24.56■■□□□ 1.52
TBC1D4-201ENST00000377625 TAOK2Q9UL54 1235 aa24.56■■□□□ 1.52
TBC1D4-201ENST00000377625 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
TBC1D4-201ENST00000377625 PPP4R2Q9NY27 417 aa24.53■■□□□ 1.52
TBC1D4-201ENST00000377625 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
TBC1D4-201ENST00000377625 MS4A1P11836 297 aa24.52■■□□□ 1.52
TBC1D4-201ENST00000377625 FGD1P98174 961 aa24.52■■□□□ 1.52
TBC1D4-201ENST00000377625 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
TBC1D4-201ENST00000377625 PNNQ9H307 717 aaKnown RBP24.5■■□□□ 1.51
TBC1D4-201ENST00000377625 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
TBC1D4-201ENST00000377625 PLCB2Q00722 1185 aa24.48■■□□□ 1.51
TBC1D4-201ENST00000377625 KCNJ4P48050 445 aa24.48■■□□□ 1.51
TBC1D4-201ENST00000377625 HSP90AB1P08238 724 aaKnown RBP24.47■■□□□ 1.51
TBC1D4-201ENST00000377625 CCNB3Q8WWL7 1395 aa24.47■■□□□ 1.51
TBC1D4-201ENST00000377625 TMF1P82094 1093 aa24.46■■□□□ 1.51
TBC1D4-201ENST00000377625 DCAF11Q8TEB1 546 aa24.45■■□□□ 1.5
TBC1D4-201ENST00000377625 NAP1L2Q9ULW6 460 aaPredicted RBP24.44■■□□□ 1.5
TBC1D4-201ENST00000377625 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
TBC1D4-201ENST00000377625 GOLGA2Q08379 1002 aa24.43■■□□□ 1.5
TBC1D4-201ENST00000377625 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
TBC1D4-201ENST00000377625 ERICH6BQ5W0A0 696 aa24.41■■□□□ 1.5
TBC1D4-201ENST00000377625 KANK1Q14678 1352 aa24.4■■□□□ 1.5
TBC1D4-201ENST00000377625 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
TBC1D4-201ENST00000377625 SOX12O15370 315 aa24.4■■□□□ 1.5
TBC1D4-201ENST00000377625 SRPK2P78362 688 aaKnown RBP24.39■■□□□ 1.49
TBC1D4-201ENST00000377625 GOLGA6L6A8MZA4 724 aa24.38■■□□□ 1.49
TBC1D4-201ENST00000377625 HDGFP51858 240 aaKnown RBP24.37■■□□□ 1.49
TBC1D4-201ENST00000377625 MLECQ14165 292 aa24.36■■□□□ 1.49
TBC1D4-201ENST00000377625 NOP58Q9Y2X3 529 aaKnown RBP24.35■■□□□ 1.49
TBC1D4-201ENST00000377625 B4GALNT3Q6L9W6 998 aa24.35■■□□□ 1.49
TBC1D4-201ENST00000377625 MORC1Q86VD1 984 aa24.34■■□□□ 1.49
TBC1D4-201ENST00000377625 NAP1L5Q96NT1 182 aaPredicted RBP24.33■■□□□ 1.49
TBC1D4-201ENST00000377625 SAFB2Q14151 953 aaKnown RBP eCLIP24.32■■□□□ 1.48
TBC1D4-201ENST00000377625 GOLGA6L4A6NEF3 574 aa24.32■■□□□ 1.48
TBC1D4-201ENST00000377625 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
TBC1D4-201ENST00000377625 HSCBQ8IWL3 235 aa24.3■■□□□ 1.48
TBC1D4-201ENST00000377625 NRDCO43847 1150 aa24.29■■□□□ 1.48
TBC1D4-201ENST00000377625 EIF4G1Q04637 1599 aaKnown RBP24.28■■□□□ 1.48
TBC1D4-201ENST00000377625 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
TBC1D4-201ENST00000377625 MCCP23508 829 aa24.26■■□□□ 1.47
TBC1D4-201ENST00000377625 RTF1Q92541 710 aaKnown RBP24.26■■□□□ 1.47
TBC1D4-201ENST00000377625 RTN4Q9NQC3 1192 aaKnown RBP24.22■■□□□ 1.47
TBC1D4-201ENST00000377625 STK26Q9P289 416 aa24.21■■□□□ 1.47
TBC1D4-201ENST00000377625 GGT6Q6P531 493 aa24.21■■□□□ 1.47
TBC1D4-201ENST00000377625 CARMIL1Q5VZK9 1371 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms