RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 LAS1LQ9Y4W2 734 aaKnown RBP12.12□□□□□ -0.47
CRNKL1-201ENST00000377327 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
CRNKL1-201ENST00000377327 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
CRNKL1-201ENST00000377327 FANCIQ9NVI1 1328 aa12.1□□□□□ -0.47
CRNKL1-201ENST00000377327 CANXP27824 592 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-201ENST00000377327 SOGA1O94964 1423 aa12.1□□□□□ -0.47
CRNKL1-201ENST00000377327 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
CRNKL1-201ENST00000377327 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
CRNKL1-201ENST00000377327 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
CRNKL1-201ENST00000377327 ANP32BQ92688 251 aaKnown RBP12.05□□□□□ -0.48
CRNKL1-201ENST00000377327 ARXQ96QS3 562 aa12.05□□□□□ -0.48
CRNKL1-201ENST00000377327 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-201ENST00000377327 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.49
CRNKL1-201ENST00000377327 IPO9Q96P70 1041 aaKnown RBP12.02□□□□□ -0.49
CRNKL1-201ENST00000377327 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
CRNKL1-201ENST00000377327 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
CRNKL1-201ENST00000377327 DHX57Q6P158 1386 aaKnown RBP12.01□□□□□ -0.49
CRNKL1-201ENST00000377327 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
CRNKL1-201ENST00000377327 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
CRNKL1-201ENST00000377327 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
CRNKL1-201ENST00000377327 BECN1Q14457 450 aa11.97□□□□□ -0.49
CRNKL1-201ENST00000377327 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
CRNKL1-201ENST00000377327 MTUS2Q5JR59 1369 aa11.96□□□□□ -0.5
CRNKL1-201ENST00000377327 PPP1R15AO75807 674 aaPredicted RBP11.96□□□□□ -0.5
CRNKL1-201ENST00000377327 HSP90AA1P07900 732 aaKnown RBP11.96□□□□□ -0.5
CRNKL1-201ENST00000377327 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.5
CRNKL1-201ENST00000377327 NACADO15069 1562 aa11.95□□□□□ -0.5
CRNKL1-201ENST00000377327 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
CRNKL1-201ENST00000377327 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
CRNKL1-201ENST00000377327 RRP7BPQ9NSQ0 103 aa11.94□□□□□ -0.5
CRNKL1-201ENST00000377327 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
CRNKL1-201ENST00000377327 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
CRNKL1-201ENST00000377327 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
CRNKL1-201ENST00000377327 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
CRNKL1-201ENST00000377327 ABCC8Q09428 1581 aa11.91□□□□□ -0.5
CRNKL1-201ENST00000377327 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
CRNKL1-201ENST00000377327 HSPA5P11021 654 aaKnown RBP11.89□□□□□ -0.51
CRNKL1-201ENST00000377327 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
CRNKL1-201ENST00000377327 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
CRNKL1-201ENST00000377327 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
CRNKL1-201ENST00000377327 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
CRNKL1-201ENST00000377327 RGS3P49796 1198 aa11.85□□□□□ -0.51
CRNKL1-201ENST00000377327 KDM2AQ9Y2K7 1162 aa11.85□□□□□ -0.51
CRNKL1-201ENST00000377327 BAZ1AQ9NRL2 1556 aaPredicted RBP11.85□□□□□ -0.51
CRNKL1-201ENST00000377327 L1TD1Q5T7N2 865 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-201ENST00000377327 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
CRNKL1-201ENST00000377327 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
CRNKL1-201ENST00000377327 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
CRNKL1-201ENST00000377327 MSH5O43196 834 aa11.81□□□□□ -0.52
CRNKL1-201ENST00000377327 GSE1Q14687 1217 aa11.81□□□□□ -0.52
CRNKL1-201ENST00000377327 RCAN3Q9UKA8 241 aa11.8□□□□□ -0.52
CRNKL1-201ENST00000377327 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
CRNKL1-201ENST00000377327 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
CRNKL1-201ENST00000377327 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
CRNKL1-201ENST00000377327 PDE4AP27815 886 aa11.78□□□□□ -0.52
CRNKL1-201ENST00000377327 CARD11Q9BXL7 1154 aa11.77□□□□□ -0.52
CRNKL1-201ENST00000377327 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.52
CRNKL1-201ENST00000377327 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
CRNKL1-201ENST00000377327 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
CRNKL1-201ENST00000377327 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-201ENST00000377327 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-201ENST00000377327 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-201ENST00000377327 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
CRNKL1-201ENST00000377327 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
CRNKL1-201ENST00000377327 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-201ENST00000377327 WIZO95785 1651 aa11.71□□□□□ -0.53
CRNKL1-201ENST00000377327 MS4A1P11836 297 aa11.7□□□□□ -0.54
CRNKL1-201ENST00000377327 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-201ENST00000377327 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
CRNKL1-201ENST00000377327 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
CRNKL1-201ENST00000377327 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
CRNKL1-201ENST00000377327 SLKQ9H2G2 1235 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-201ENST00000377327 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
CRNKL1-201ENST00000377327 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-201ENST00000377327 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
CRNKL1-201ENST00000377327 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
CRNKL1-201ENST00000377327 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
CRNKL1-201ENST00000377327 GOLGA6L3A6NEY3 463 aa11.68□□□□□ -0.54
CRNKL1-201ENST00000377327 PDE3BQ13370 1112 aa11.68□□□□□ -0.54
CRNKL1-201ENST00000377327 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-201ENST00000377327 EXOC6Q8TAG9 804 aa11.67□□□□□ -0.54
CRNKL1-201ENST00000377327 RALBP1Q15311 655 aa11.67□□□□□ -0.54
CRNKL1-201ENST00000377327 GZF1Q9H116 711 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-201ENST00000377327 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-201ENST00000377327 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-201ENST00000377327 MPHOSPH9Q99550 1183 aa11.65□□□□□ -0.54
CRNKL1-201ENST00000377327 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-201ENST00000377327 FOXD1Q16676 465 aa11.65□□□□□ -0.54
CRNKL1-201ENST00000377327 DNTTIP2Q5QJE6 756 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-201ENST00000377327 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.54
CRNKL1-201ENST00000377327 MSNP26038 577 aaKnown RBP11.65□□□□□ -0.55
CRNKL1-201ENST00000377327 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.554e-7■■■□□ 17.8
CRNKL1-201ENST00000377327 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
CRNKL1-201ENST00000377327 HSCBQ8IWL3 235 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms