RNA–Protein interactions for RNA: ENST00000375491.7

XAGE3-202, Transcript of X antigen family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XAGE3, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XAGE3-202ENST00000375491 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
XAGE3-202ENST00000375491 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
XAGE3-202ENST00000375491 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
XAGE3-202ENST00000375491 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
XAGE3-202ENST00000375491 HMGXB3Q12766 1538 aa13.28□□□□□ -0.28
XAGE3-202ENST00000375491 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
XAGE3-202ENST00000375491 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
XAGE3-202ENST00000375491 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
XAGE3-202ENST00000375491 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
XAGE3-202ENST00000375491 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
XAGE3-202ENST00000375491 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
XAGE3-202ENST00000375491 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
XAGE3-202ENST00000375491 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
XAGE3-202ENST00000375491 CUX2O14529 1486 aa13.16□□□□□ -0.3
XAGE3-202ENST00000375491 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
XAGE3-202ENST00000375491 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
XAGE3-202ENST00000375491 NESP48681 1621 aa13.11□□□□□ -0.31
XAGE3-202ENST00000375491 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
XAGE3-202ENST00000375491 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
XAGE3-202ENST00000375491 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.31
XAGE3-202ENST00000375491 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
XAGE3-202ENST00000375491 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
XAGE3-202ENST00000375491 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
XAGE3-202ENST00000375491 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
XAGE3-202ENST00000375491 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
XAGE3-202ENST00000375491 WIZO95785 1651 aa13.04□□□□□ -0.32
XAGE3-202ENST00000375491 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
XAGE3-202ENST00000375491 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
XAGE3-202ENST00000375491 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
XAGE3-202ENST00000375491 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
XAGE3-202ENST00000375491 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
XAGE3-202ENST00000375491 PROM2Q8N271 834 aa12.93□□□□□ -0.34
XAGE3-202ENST00000375491 PDS5BQ9NTI5 1447 aa12.93□□□□□ -0.34
XAGE3-202ENST00000375491 ATMINO43313 823 aaPredicted RBP12.9□□□□□ -0.34
XAGE3-202ENST00000375491 SLC39A7Q92504 469 aa12.9□□□□□ -0.34
XAGE3-202ENST00000375491 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
XAGE3-202ENST00000375491 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
XAGE3-202ENST00000375491 C7P10643 843 aa12.89□□□□□ -0.35
XAGE3-202ENST00000375491 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
XAGE3-202ENST00000375491 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
XAGE3-202ENST00000375491 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
XAGE3-202ENST00000375491 POTEMA6NI47 508 aa12.84□□□□□ -0.35
XAGE3-202ENST00000375491 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
XAGE3-202ENST00000375491 WDR62O43379 1518 aa12.83□□□□□ -0.35
XAGE3-202ENST00000375491 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
XAGE3-202ENST00000375491 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
XAGE3-202ENST00000375491 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
XAGE3-202ENST00000375491 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
XAGE3-202ENST00000375491 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
XAGE3-202ENST00000375491 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
XAGE3-202ENST00000375491 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
XAGE3-202ENST00000375491 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
XAGE3-202ENST00000375491 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
XAGE3-202ENST00000375491 CFTRP13569 1480 aa12.76□□□□□ -0.37
XAGE3-202ENST00000375491 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
XAGE3-202ENST00000375491 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
XAGE3-202ENST00000375491 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
XAGE3-202ENST00000375491 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
XAGE3-202ENST00000375491 TIE1P35590 1138 aa12.68□□□□□ -0.38
XAGE3-202ENST00000375491 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
XAGE3-202ENST00000375491 MAP3K13O43283 966 aa12.66□□□□□ -0.38
XAGE3-202ENST00000375491 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
XAGE3-202ENST00000375491 MIER1Q8N108 512 aa12.65□□□□□ -0.38
XAGE3-202ENST00000375491 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
XAGE3-202ENST00000375491 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
XAGE3-202ENST00000375491 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
XAGE3-202ENST00000375491 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
XAGE3-202ENST00000375491 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
XAGE3-202ENST00000375491 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
XAGE3-202ENST00000375491 FAM163AQ96GL9 167 aaPredicted RBP12.56□□□□□ -0.4
XAGE3-202ENST00000375491 TOPBP1Q92547 1522 aa12.55□□□□□ -0.4
XAGE3-202ENST00000375491 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
XAGE3-202ENST00000375491 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
XAGE3-202ENST00000375491 IER5LQ5T953 404 aa12.53□□□□□ -0.4
XAGE3-202ENST00000375491 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
XAGE3-202ENST00000375491 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
XAGE3-202ENST00000375491 SEC24BO95487 1268 aa12.52□□□□□ -0.41
XAGE3-202ENST00000375491 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
XAGE3-202ENST00000375491 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
XAGE3-202ENST00000375491 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.41
XAGE3-202ENST00000375491 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
XAGE3-202ENST00000375491 CHD1O14646 1710 aa12.5□□□□□ -0.41
XAGE3-202ENST00000375491 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
XAGE3-202ENST00000375491 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
XAGE3-202ENST00000375491 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
XAGE3-202ENST00000375491 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
XAGE3-202ENST00000375491 NUBP1P53384 320 aa12.47□□□□□ -0.41
XAGE3-202ENST00000375491 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
XAGE3-202ENST00000375491 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
XAGE3-202ENST00000375491 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
XAGE3-202ENST00000375491 IFNL1Q8IU54 200 aa12.41□□□□□ -0.42
XAGE3-202ENST00000375491 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
XAGE3-202ENST00000375491 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
XAGE3-202ENST00000375491 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
XAGE3-202ENST00000375491 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
XAGE3-202ENST00000375491 AQRO60306 1485 aaKnown RBP eCLIP12.36□□□□□ -0.43
XAGE3-202ENST00000375491 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
XAGE3-202ENST00000375491 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
XAGE3-202ENST00000375491 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
XAGE3-202ENST00000375491 CUX1P39880 1505 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 253.2 ms