RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
SIK3-201ENST00000375300 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
SIK3-201ENST00000375300 ESF1Q9H501 851 aaKnown RBP21.49■■□□□ 1.03
SIK3-201ENST00000375300 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
SIK3-201ENST00000375300 NEFMP07197 916 aa21.47■■□□□ 1.03
SIK3-201ENST00000375300 SIN3AQ96ST3 1273 aa21.47■■□□□ 1.03
SIK3-201ENST00000375300 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
SIK3-201ENST00000375300 ARXQ96QS3 562 aa21.44■■□□□ 1.02
SIK3-201ENST00000375300 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.02
SIK3-201ENST00000375300 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
SIK3-201ENST00000375300 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
SIK3-201ENST00000375300 SUPT16HQ9Y5B9 1047 aaKnown RBP21.44■■□□□ 1.02
SIK3-201ENST00000375300 EEA1Q15075 1411 aa21.42■■□□□ 1.02
SIK3-201ENST00000375300 SOGA1O94964 1423 aa21.42■■□□□ 1.02
SIK3-201ENST00000375300 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
SIK3-201ENST00000375300 PLEKHG5O94827 1062 aa21.37■■□□□ 1.01
SIK3-201ENST00000375300 TSPY4P0CV99 314 aa21.36■■□□□ 1.01
SIK3-201ENST00000375300 TSPY10P0CW01 314 aa21.36■■□□□ 1.01
SIK3-201ENST00000375300 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
SIK3-201ENST00000375300 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
SIK3-201ENST00000375300 HSP90AA1P07900 732 aaKnown RBP21.34■■□□□ 1.01
SIK3-201ENST00000375300 WIZO95785 1651 aa21.33■■□□□ 1.01
SIK3-201ENST00000375300 KIF27Q86VH2 1401 aa21.33■■□□□ 1
SIK3-201ENST00000375300 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
SIK3-201ENST00000375300 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
SIK3-201ENST00000375300 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
SIK3-201ENST00000375300 RGL3Q3MIN7 710 aa21.3■■□□□ 1
SIK3-201ENST00000375300 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
SIK3-201ENST00000375300 PLEKHD1A6NEE1 506 aa21.24■□□□□ 0.99
SIK3-201ENST00000375300 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.23■□□□□ 0.99
SIK3-201ENST00000375300 CUX2O14529 1486 aa21.23■□□□□ 0.99
SIK3-201ENST00000375300 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
SIK3-201ENST00000375300 CCNB3Q8WWL7 1395 aa21.15■□□□□ 0.98
SIK3-201ENST00000375300 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
SIK3-201ENST00000375300 ANP32BQ92688 251 aaKnown RBP21.15■□□□□ 0.98
SIK3-201ENST00000375300 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
SIK3-201ENST00000375300 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
SIK3-201ENST00000375300 ZBTB7CA1YPR0 619 aa21.1■□□□□ 0.97
SIK3-201ENST00000375300 CARD11Q9BXL7 1154 aa21.09■□□□□ 0.97
SIK3-201ENST00000375300 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.97
SIK3-201ENST00000375300 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
SIK3-201ENST00000375300 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
SIK3-201ENST00000375300 PPP4R2Q9NY27 417 aa21.07■□□□□ 0.96
SIK3-201ENST00000375300 RTN4Q9NQC3 1192 aaKnown RBP21.02■□□□□ 0.96
SIK3-201ENST00000375300 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
SIK3-201ENST00000375300 CC2D1BQ5T0F9 858 aaKnown RBP21■□□□□ 0.95
SIK3-201ENST00000375300 DDRGK1Q96HY6 314 aa20.99■□□□□ 0.95
SIK3-201ENST00000375300 FOXD1Q16676 465 aa20.99■□□□□ 0.95
SIK3-201ENST00000375300 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
SIK3-201ENST00000375300 NEUROD2Q15784 382 aa20.98■□□□□ 0.95
SIK3-201ENST00000375300 RBM19Q9Y4C8 960 aaKnown RBP20.98■□□□□ 0.95
SIK3-201ENST00000375300 C14orf37Q86TY3 774 aa20.98■□□□□ 0.95
SIK3-201ENST00000375300 NOP58Q9Y2X3 529 aaKnown RBP20.97■□□□□ 0.95
SIK3-201ENST00000375300 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
SIK3-201ENST00000375300 RGS3P49796 1198 aa20.95■□□□□ 0.94
SIK3-201ENST00000375300 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
SIK3-201ENST00000375300 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
SIK3-201ENST00000375300 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
SIK3-201ENST00000375300 MLECQ14165 292 aa20.93■□□□□ 0.94
SIK3-201ENST00000375300 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
SIK3-201ENST00000375300 A0A0G2JS52 829 aa20.92■□□□□ 0.94
SIK3-201ENST00000375300 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
SIK3-201ENST00000375300 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
SIK3-201ENST00000375300 BECN1Q14457 450 aa20.9■□□□□ 0.94
SIK3-201ENST00000375300 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
SIK3-201ENST00000375300 CCER2I3L3R5 266 aa20.87■□□□□ 0.93
SIK3-201ENST00000375300 TSHZ2Q9NRE2 1034 aa20.86■□□□□ 0.93
SIK3-201ENST00000375300 PPM1GO15355 546 aaPredicted RBP20.86■□□□□ 0.93
SIK3-201ENST00000375300 MYH16Q9H6N6 1097 aa20.86■□□□□ 0.93
SIK3-201ENST00000375300 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
SIK3-201ENST00000375300 FRAT1Q92837 279 aaPredicted RBP20.85■□□□□ 0.93
SIK3-201ENST00000375300 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
SIK3-201ENST00000375300 TRHP20396 242 aaPredicted RBP20.84■□□□□ 0.93
SIK3-201ENST00000375300 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
SIK3-201ENST00000375300 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
SIK3-201ENST00000375300 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
SIK3-201ENST00000375300 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
SIK3-201ENST00000375300 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
SIK3-201ENST00000375300 TPRNQ4KMQ1 711 aa20.79■□□□□ 0.92
SIK3-201ENST00000375300 GLIPR1L2Q4G1C9 344 aa20.78■□□□□ 0.92
SIK3-201ENST00000375300 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
SIK3-201ENST00000375300 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
SIK3-201ENST00000375300 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
SIK3-201ENST00000375300 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.91
SIK3-201ENST00000375300 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
SIK3-201ENST00000375300 CFAP53Q96M91 514 aa20.75■□□□□ 0.91
SIK3-201ENST00000375300 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
SIK3-201ENST00000375300 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
SIK3-201ENST00000375300 TRIM44Q96DX7 344 aaPredicted RBP20.74■□□□□ 0.91
SIK3-201ENST00000375300 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
SIK3-201ENST00000375300 GGT6Q6P531 493 aa20.73■□□□□ 0.91
SIK3-201ENST00000375300 PKD2Q13563 968 aa20.69■□□□□ 0.9
SIK3-201ENST00000375300 LMOD2Q6P5Q4 547 aa20.68■□□□□ 0.9
SIK3-201ENST00000375300 SPRYD3Q8NCJ5 442 aa20.68■□□□□ 0.9
SIK3-201ENST00000375300 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
SIK3-201ENST00000375300 SOX12O15370 315 aa20.67■□□□□ 0.9
SIK3-201ENST00000375300 HNRNPMP52272 730 aaKnown RBP eCLIP20.66■□□□□ 0.99e-7■■■■■ 27.5
SIK3-201ENST00000375300 TMF1P82094 1093 aa20.66■□□□□ 0.9
SIK3-201ENST00000375300 U2SURPO15042 1029 aaKnown RBP20.65■□□□□ 0.9
SIK3-201ENST00000375300 POGKQ9P215 609 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms