RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
TGFBR1-201ENST00000374990 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
TGFBR1-201ENST00000374990 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
TGFBR1-201ENST00000374990 CCDC136Q96JN2 1154 aa26.29■■□□□ 1.8
TGFBR1-201ENST00000374990 CHGAP10645 457 aaKnown RBP26.28■■□□□ 1.8
TGFBR1-201ENST00000374990 TIMELESSQ9UNS1 1208 aa26.28■■□□□ 1.8
TGFBR1-201ENST00000374990 KDM2AQ9Y2K7 1162 aa26.26■■□□□ 1.79
TGFBR1-201ENST00000374990 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
TGFBR1-201ENST00000374990 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.23■■□□□ 1.79
TGFBR1-201ENST00000374990 NPM2Q86SE8 214 aaKnown RBP26.2■■□□□ 1.78
TGFBR1-201ENST00000374990 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
TGFBR1-201ENST00000374990 ESF1Q9H501 851 aaKnown RBP26.19■■□□□ 1.78
TGFBR1-201ENST00000374990 WDR43Q15061 677 aaKnown RBP eCLIP26.17■■□□□ 1.78
TGFBR1-201ENST00000374990 SALL2Q9Y467 1007 aaPredicted RBP26.17■■□□□ 1.78
TGFBR1-201ENST00000374990 CUX2O14529 1486 aa26.15■■□□□ 1.78
TGFBR1-201ENST00000374990 STAG3Q9UJ98 1225 aa26.14■■□□□ 1.78
TGFBR1-201ENST00000374990 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
TGFBR1-201ENST00000374990 UPF2Q9HAU5 1272 aaKnown RBP26.11■■□□□ 1.77
TGFBR1-201ENST00000374990 SIN3AQ96ST3 1273 aa26.1■■□□□ 1.77
TGFBR1-201ENST00000374990 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
TGFBR1-201ENST00000374990 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
TGFBR1-201ENST00000374990 SLC24A1O60721 1099 aa26.03■■□□□ 1.76
TGFBR1-201ENST00000374990 CDCA8Q53HL2 280 aa25.99■■□□□ 1.75
TGFBR1-201ENST00000374990 SETD5Q9C0A6 1442 aa25.98■■□□□ 1.75
TGFBR1-201ENST00000374990 BCL11AQ9H165 835 aa25.98■■□□□ 1.75
TGFBR1-201ENST00000374990 IRX6P78412 446 aaPredicted RBP25.98■■□□□ 1.75
TGFBR1-201ENST00000374990 CARD11Q9BXL7 1154 aa25.95■■□□□ 1.75
TGFBR1-201ENST00000374990 KCNH8Q96L42 1107 aa25.95■■□□□ 1.74
TGFBR1-201ENST00000374990 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
TGFBR1-201ENST00000374990 WIZO95785 1651 aa25.94■■□□□ 1.74
TGFBR1-201ENST00000374990 RGL3Q3MIN7 710 aa25.94■■□□□ 1.74
TGFBR1-201ENST00000374990 CCER2I3L3R5 266 aa25.89■■□□□ 1.74
TGFBR1-201ENST00000374990 SUPT16HQ9Y5B9 1047 aaKnown RBP25.88■■□□□ 1.73
TGFBR1-201ENST00000374990 HSP90AA1P07900 732 aaKnown RBP25.87■■□□□ 1.73
TGFBR1-201ENST00000374990 ARHGAP35Q9NRY4 1499 aa25.87■■□□□ 1.73
TGFBR1-201ENST00000374990 FMN1Q68DA7 1419 aa25.84■■□□□ 1.73
TGFBR1-201ENST00000374990 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
TGFBR1-201ENST00000374990 PPP4R2Q9NY27 417 aa25.79■■□□□ 1.72
TGFBR1-201ENST00000374990 RAB3GAP2Q9H2M9 1393 aa25.78■■□□□ 1.72
TGFBR1-201ENST00000374990 ANP32BQ92688 251 aaKnown RBP25.77■■□□□ 1.72
TGFBR1-201ENST00000374990 ATAD2BQ9ULI0 1458 aa25.75■■□□□ 1.71
TGFBR1-201ENST00000374990 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
TGFBR1-201ENST00000374990 CFAP53Q96M91 514 aa25.73■■□□□ 1.71
TGFBR1-201ENST00000374990 CADPSQ9ULU8 1353 aa25.73■■□□□ 1.71
TGFBR1-201ENST00000374990 ERCC6Q03468 1493 aa25.71■■□□□ 1.71
TGFBR1-201ENST00000374990 EIF4G1Q04637 1599 aaKnown RBP25.7■■□□□ 1.71
TGFBR1-201ENST00000374990 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
TGFBR1-201ENST00000374990 NBR1Q14596 966 aa25.7■■□□□ 1.7
TGFBR1-201ENST00000374990 DDRGK1Q96HY6 314 aa25.69■■□□□ 1.7
TGFBR1-201ENST00000374990 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
TGFBR1-201ENST00000374990 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
TGFBR1-201ENST00000374990 TDRD9Q8NDG6 1382 aaKnown RBP25.64■■□□□ 1.7
TGFBR1-201ENST00000374990 HSPA5P11021 654 aaKnown RBP25.63■■□□□ 1.69
TGFBR1-201ENST00000374990 DCAF11Q8TEB1 546 aa25.62■■□□□ 1.69
TGFBR1-201ENST00000374990 MYH16Q9H6N6 1097 aa25.62■■□□□ 1.69
TGFBR1-201ENST00000374990 CARMIL2Q6F5E8 1435 aa25.6■■□□□ 1.69
TGFBR1-201ENST00000374990 TMF1P82094 1093 aa25.6■■□□□ 1.69
TGFBR1-201ENST00000374990 ANP32EQ9BTT0 268 aa25.59■■□□□ 1.69
TGFBR1-201ENST00000374990 BECN1Q14457 450 aa25.58■■□□□ 1.69
TGFBR1-201ENST00000374990 ERICH6BQ5W0A0 696 aa25.57■■□□□ 1.68
TGFBR1-201ENST00000374990 MPHOSPH9Q99550 1183 aa25.57■■□□□ 1.68
TGFBR1-201ENST00000374990 PKD2Q13563 968 aa25.56■■□□□ 1.68
TGFBR1-201ENST00000374990 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
TGFBR1-201ENST00000374990 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
TGFBR1-201ENST00000374990 DHX57Q6P158 1386 aaKnown RBP25.49■■□□□ 1.67
TGFBR1-201ENST00000374990 FHOD3Q2V2M9 1422 aa25.48■■□□□ 1.67
TGFBR1-201ENST00000374990 SENP3-EIF4A1A0A087X0R7 540 aa25.48■■□□□ 1.67
TGFBR1-201ENST00000374990 KANK1Q14678 1352 aa25.47■■□□□ 1.67
TGFBR1-201ENST00000374990 ANKRD30AQ9BXX3 1397 aa25.47■■□□□ 1.67
TGFBR1-201ENST00000374990 PPM1GO15355 546 aaPredicted RBP25.46■■□□□ 1.67
TGFBR1-201ENST00000374990 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
TGFBR1-201ENST00000374990 CC2D1BQ5T0F9 858 aaKnown RBP25.44■■□□□ 1.66
TGFBR1-201ENST00000374990 B4GALNT3Q6L9W6 998 aa25.43■■□□□ 1.66
TGFBR1-201ENST00000374990 MAPK8IP3Q9UPT6 1336 aa25.42■■□□□ 1.66
TGFBR1-201ENST00000374990 NUP155O75694 1391 aa25.42■■□□□ 1.66
TGFBR1-201ENST00000374990 EIF5BO60841 1220 aaKnown RBP25.41■■□□□ 1.66
TGFBR1-201ENST00000374990 FOXD1Q16676 465 aa25.4■■□□□ 1.66
TGFBR1-201ENST00000374990 MS4A1P11836 297 aa25.4■■□□□ 1.66
TGFBR1-201ENST00000374990 FTSJ3Q8IY81 847 aaKnown RBP25.4■■□□□ 1.66
TGFBR1-201ENST00000374990 L3MBTL2Q969R5 705 aa25.4■■□□□ 1.66
TGFBR1-201ENST00000374990 RSPH4AQ5TD94 716 aa25.39■■□□□ 1.65
TGFBR1-201ENST00000374990 NEUROD2Q15784 382 aa25.38■■□□□ 1.65
TGFBR1-201ENST00000374990 RALBP1Q15311 655 aa25.37■■□□□ 1.65
TGFBR1-201ENST00000374990 CCDC18Q5T9S5 1454 aa25.37■■□□□ 1.65
TGFBR1-201ENST00000374990 POGKQ9P215 609 aa25.37■■□□□ 1.65
TGFBR1-201ENST00000374990 KTN1Q86UP2 1357 aaKnown RBP25.36■■□□□ 1.65
TGFBR1-201ENST00000374990 EFCAB2Q5VUJ9 269 aa25.36■■□□□ 1.65
TGFBR1-201ENST00000374990 CHMP4BQ9H444 224 aaKnown RBP25.36■■□□□ 1.65
TGFBR1-201ENST00000374990 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
TGFBR1-201ENST00000374990 NOP58Q9Y2X3 529 aaKnown RBP25.31■■□□□ 1.64
TGFBR1-201ENST00000374990 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
TGFBR1-201ENST00000374990 GOLGA6L22H0YM25 854 aa25.28■■□□□ 1.64
TGFBR1-201ENST00000374990 IGF1RP08069 1367 aa25.28■■□□□ 1.64
TGFBR1-201ENST00000374990 RGS3P49796 1198 aa25.28■■□□□ 1.64
TGFBR1-201ENST00000374990 RBM19Q9Y4C8 960 aaKnown RBP25.28■■□□□ 1.64
TGFBR1-201ENST00000374990 FRAT1Q92837 279 aaPredicted RBP25.27■■□□□ 1.64
TGFBR1-201ENST00000374990 FANCD2Q9BXW9 1451 aa25.27■■□□□ 1.64
TGFBR1-201ENST00000374990 ROCK2O75116 1388 aaKnown RBP25.27■■□□□ 1.64
TGFBR1-201ENST00000374990 TNNT2P45379 298 aaPredicted RBP25.23■■□□□ 1.63
TGFBR1-201ENST00000374990 MORC1Q86VD1 984 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms