RNA–Protein interactions for RNA: ENST00000374012.7

PHF20-203, Transcript of PHD finger protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF20, Length 5,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-203ENST00000374012 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
PHF20-203ENST00000374012 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
PHF20-203ENST00000374012 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
PHF20-203ENST00000374012 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
PHF20-203ENST00000374012 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
PHF20-203ENST00000374012 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
PHF20-203ENST00000374012 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
PHF20-203ENST00000374012 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
PHF20-203ENST00000374012 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
PHF20-203ENST00000374012 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
PHF20-203ENST00000374012 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
PHF20-203ENST00000374012 CCDC136Q96JN2 1154 aa16.85■□□□□ 0.29
PHF20-203ENST00000374012 A0A0G2JS52 829 aa16.83■□□□□ 0.29
PHF20-203ENST00000374012 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
PHF20-203ENST00000374012 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
PHF20-203ENST00000374012 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
PHF20-203ENST00000374012 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
PHF20-203ENST00000374012 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
PHF20-203ENST00000374012 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
PHF20-203ENST00000374012 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.27
PHF20-203ENST00000374012 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.26
PHF20-203ENST00000374012 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
PHF20-203ENST00000374012 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
PHF20-203ENST00000374012 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
PHF20-203ENST00000374012 KANK1Q14678 1352 aa16.68■□□□□ 0.26
PHF20-203ENST00000374012 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
PHF20-203ENST00000374012 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
PHF20-203ENST00000374012 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
PHF20-203ENST00000374012 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
PHF20-203ENST00000374012 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
PHF20-203ENST00000374012 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
PHF20-203ENST00000374012 CASC1Q6TDU7 716 aa16.65■□□□□ 0.26
PHF20-203ENST00000374012 POGKQ9P215 609 aa16.65■□□□□ 0.26
PHF20-203ENST00000374012 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
PHF20-203ENST00000374012 BECN1Q14457 450 aa16.64■□□□□ 0.25
PHF20-203ENST00000374012 HDGFP51858 240 aaKnown RBP16.64■□□□□ 0.25
PHF20-203ENST00000374012 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
PHF20-203ENST00000374012 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
PHF20-203ENST00000374012 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
PHF20-203ENST00000374012 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
PHF20-203ENST00000374012 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
PHF20-203ENST00000374012 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
PHF20-203ENST00000374012 FTSJ3Q8IY81 847 aaKnown RBP16.57■□□□□ 0.24
PHF20-203ENST00000374012 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
PHF20-203ENST00000374012 ARXQ96QS3 562 aa16.56■□□□□ 0.24
PHF20-203ENST00000374012 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
PHF20-203ENST00000374012 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
PHF20-203ENST00000374012 MIER1Q8N108 512 aa16.54■□□□□ 0.24
PHF20-203ENST00000374012 CUX2O14529 1486 aa16.54■□□□□ 0.24
PHF20-203ENST00000374012 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
PHF20-203ENST00000374012 LMOD2Q6P5Q4 547 aa16.52■□□□□ 0.23
PHF20-203ENST00000374012 MS4A1P11836 297 aa16.51■□□□□ 0.23
PHF20-203ENST00000374012 CARMIL2Q6F5E8 1435 aa16.51■□□□□ 0.23
PHF20-203ENST00000374012 IRX6P78412 446 aaPredicted RBP16.51■□□□□ 0.23
PHF20-203ENST00000374012 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
PHF20-203ENST00000374012 SMARCA2P51531 1590 aa16.5■□□□□ 0.23
PHF20-203ENST00000374012 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
PHF20-203ENST00000374012 TMF1P82094 1093 aa16.49■□□□□ 0.23
PHF20-203ENST00000374012 NPHP1O15259 732 aa16.49■□□□□ 0.23
PHF20-203ENST00000374012 NBR1Q14596 966 aa16.48■□□□□ 0.23
PHF20-203ENST00000374012 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
PHF20-203ENST00000374012 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
PHF20-203ENST00000374012 ARHGAP35Q9NRY4 1499 aa16.45■□□□□ 0.22
PHF20-203ENST00000374012 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
PHF20-203ENST00000374012 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
PHF20-203ENST00000374012 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
PHF20-203ENST00000374012 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
PHF20-203ENST00000374012 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
PHF20-203ENST00000374012 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
PHF20-203ENST00000374012 DCAF11Q8TEB1 546 aa16.4■□□□□ 0.22
PHF20-203ENST00000374012 MLECQ14165 292 aa16.39■□□□□ 0.21
PHF20-203ENST00000374012 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
PHF20-203ENST00000374012 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
PHF20-203ENST00000374012 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
PHF20-203ENST00000374012 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
PHF20-203ENST00000374012 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
PHF20-203ENST00000374012 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
PHF20-203ENST00000374012 SOGA1O94964 1423 aa16.35■□□□□ 0.21
PHF20-203ENST00000374012 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
PHF20-203ENST00000374012 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
PHF20-203ENST00000374012 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
PHF20-203ENST00000374012 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
PHF20-203ENST00000374012 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
PHF20-203ENST00000374012 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
PHF20-203ENST00000374012 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
PHF20-203ENST00000374012 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
PHF20-203ENST00000374012 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
PHF20-203ENST00000374012 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
PHF20-203ENST00000374012 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
PHF20-203ENST00000374012 GGT6Q6P531 493 aa16.3■□□□□ 0.2
PHF20-203ENST00000374012 EIF3AQ14152 1382 aaKnown RBP16.3■□□□□ 0.2
PHF20-203ENST00000374012 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
PHF20-203ENST00000374012 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
PHF20-203ENST00000374012 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
PHF20-203ENST00000374012 FGD1P98174 961 aa16.29■□□□□ 0.2
PHF20-203ENST00000374012 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
PHF20-203ENST00000374012 KCNJ4P48050 445 aa16.28■□□□□ 0.2
PHF20-203ENST00000374012 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
PHF20-203ENST00000374012 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.19
PHF20-203ENST00000374012 CALD1Q05682 793 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms