RNA–Protein interactions for RNA: ENST00000373106.5

CSF3R-205, Transcript of colony stimulating factor 3 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF3R, Length 3,373 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-205ENST00000373106 CEP162Q5TB80 1403 aa14.83□□□□□ -0.04
CSF3R-205ENST00000373106 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
CSF3R-205ENST00000373106 BIVM-ERCC5R4GMW8 1640 aa14.8□□□□□ -0.04
CSF3R-205ENST00000373106 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
CSF3R-205ENST00000373106 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
CSF3R-205ENST00000373106 TOP2BQ02880 1626 aa14.75□□□□□ -0.05
CSF3R-205ENST00000373106 B4GALNT3Q6L9W6 998 aa14.74□□□□□ -0.05
CSF3R-205ENST00000373106 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
CSF3R-205ENST00000373106 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
CSF3R-205ENST00000373106 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
CSF3R-205ENST00000373106 NESP48681 1621 aa14.72□□□□□ -0.05
CSF3R-205ENST00000373106 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
CSF3R-205ENST00000373106 ANP32AP39687 249 aaKnown RBP14.71□□□□□ -0.05
CSF3R-205ENST00000373106 CUX1P39880 1505 aa14.71□□□□□ -0.05
CSF3R-205ENST00000373106 BRPF3Q9ULD4 1205 aa14.7□□□□□ -0.06
CSF3R-205ENST00000373106 PODXL2Q9NZ53 605 aa14.7□□□□□ -0.06
CSF3R-205ENST00000373106 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
CSF3R-205ENST00000373106 LAS1LQ9Y4W2 734 aaKnown RBP14.68□□□□□ -0.06
CSF3R-205ENST00000373106 ANP32CO43423 234 aa14.68□□□□□ -0.06
CSF3R-205ENST00000373106 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
CSF3R-205ENST00000373106 PPP4R2Q9NY27 417 aa14.66□□□□□ -0.06
CSF3R-205ENST00000373106 NEFMP07197 916 aa14.65□□□□□ -0.06
CSF3R-205ENST00000373106 DHX57Q6P158 1386 aaKnown RBP14.65□□□□□ -0.06
CSF3R-205ENST00000373106 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
CSF3R-205ENST00000373106 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
CSF3R-205ENST00000373106 IPO9Q96P70 1041 aaKnown RBP14.63□□□□□ -0.07
CSF3R-205ENST00000373106 RUSC2Q8N2Y8 1516 aa14.6□□□□□ -0.07
CSF3R-205ENST00000373106 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
CSF3R-205ENST00000373106 SLC24A1O60721 1099 aa14.59□□□□□ -0.07
CSF3R-205ENST00000373106 GLIPR1L2Q4G1C9 344 aa14.59□□□□□ -0.07
CSF3R-205ENST00000373106 SOGA1O94964 1423 aa14.58□□□□□ -0.08
CSF3R-205ENST00000373106 TNIKQ9UKE5 1360 aa14.57□□□□□ -0.08
CSF3R-205ENST00000373106 ZMYND15Q9H091 742 aa14.57□□□□□ -0.08
CSF3R-205ENST00000373106 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
CSF3R-205ENST00000373106 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
CSF3R-205ENST00000373106 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
CSF3R-205ENST00000373106 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
CSF3R-205ENST00000373106 SIN3AQ96ST3 1273 aa14.51□□□□□ -0.09
CSF3R-205ENST00000373106 WASHC2AQ641Q2 1341 aa14.5□□□□□ -0.09
CSF3R-205ENST00000373106 RSPH6AQ9H0K4 717 aa14.5□□□□□ -0.09
CSF3R-205ENST00000373106 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
CSF3R-205ENST00000373106 PPP1R15AO75807 674 aaPredicted RBP14.49□□□□□ -0.09
CSF3R-205ENST00000373106 C11orf95C9JLR9 678 aaPredicted RBP14.47□□□□□ -0.09
CSF3R-205ENST00000373106 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
CSF3R-205ENST00000373106 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
CSF3R-205ENST00000373106 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
CSF3R-205ENST00000373106 A0A0U1RQG5 324 aaPredicted RBP14.44□□□□□ -0.1
CSF3R-205ENST00000373106 KIF21BO75037 1637 aa14.43□□□□□ -0.1
CSF3R-205ENST00000373106 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
CSF3R-205ENST00000373106 GSE1Q14687 1217 aa14.42□□□□□ -0.1
CSF3R-205ENST00000373106 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
CSF3R-205ENST00000373106 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
CSF3R-205ENST00000373106 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
CSF3R-205ENST00000373106 EEA1Q15075 1411 aa14.42□□□□□ -0.1
CSF3R-205ENST00000373106 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
CSF3R-205ENST00000373106 WDR62O43379 1518 aa14.4□□□□□ -0.1
CSF3R-205ENST00000373106 FAM9BQ8IZU0 186 aa14.39□□□□□ -0.11
CSF3R-205ENST00000373106 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
CSF3R-205ENST00000373106 PPM1GO15355 546 aaPredicted RBP14.37□□□□□ -0.11
CSF3R-205ENST00000373106 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
CSF3R-205ENST00000373106 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
CSF3R-205ENST00000373106 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
CSF3R-205ENST00000373106 RAD54L2Q9Y4B4 1467 aa14.35□□□□□ -0.11
CSF3R-205ENST00000373106 CLIP1P30622 1438 aa14.35□□□□□ -0.11
CSF3R-205ENST00000373106 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
CSF3R-205ENST00000373106 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
CSF3R-205ENST00000373106 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.11
CSF3R-205ENST00000373106 CUX2O14529 1486 aa14.33□□□□□ -0.12
CSF3R-205ENST00000373106 NAP1L5Q96NT1 182 aaPredicted RBP14.32□□□□□ -0.12
CSF3R-205ENST00000373106 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
CSF3R-205ENST00000373106 HSP90AA2PQ14568 343 aaPredicted RBP14.31□□□□□ -0.12
CSF3R-205ENST00000373106 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
CSF3R-205ENST00000373106 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
CSF3R-205ENST00000373106 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
CSF3R-205ENST00000373106 CNGB1Q14028 1251 aaPredicted RBP14.29□□□□□ -0.12
CSF3R-205ENST00000373106 SLC4A3P48751 1232 aa14.28□□□□□ -0.12
CSF3R-205ENST00000373106 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
CSF3R-205ENST00000373106 VPS8Q8N3P4 1428 aa14.28□□□□□ -0.12
CSF3R-205ENST00000373106 NFKBIBQ15653 356 aa14.28□□□□□ -0.12
CSF3R-205ENST00000373106 PBRM1Q86U86 1689 aa14.27□□□□□ -0.13
CSF3R-205ENST00000373106 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
CSF3R-205ENST00000373106 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
CSF3R-205ENST00000373106 ARXQ96QS3 562 aa14.26□□□□□ -0.13
CSF3R-205ENST00000373106 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
CSF3R-205ENST00000373106 IGF1RP08069 1367 aa14.25□□□□□ -0.13
CSF3R-205ENST00000373106 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
CSF3R-205ENST00000373106 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
CSF3R-205ENST00000373106 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
CSF3R-205ENST00000373106 CUL7Q14999 1698 aa14.22□□□□□ -0.13
CSF3R-205ENST00000373106 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
CSF3R-205ENST00000373106 PDE4AP27815 886 aa14.21□□□□□ -0.13
CSF3R-205ENST00000373106 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.13
CSF3R-205ENST00000373106 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
CSF3R-205ENST00000373106 RBM10P98175 930 aaKnown RBP14.2□□□□□ -0.14
CSF3R-205ENST00000373106 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
CSF3R-205ENST00000373106 RRAGDQ9NQL2 400 aaPredicted RBP14.19□□□□□ -0.14
CSF3R-205ENST00000373106 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
CSF3R-205ENST00000373106 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
CSF3R-205ENST00000373106 FRAT2O75474 233 aaPredicted RBP14.16□□□□□ -0.14
CSF3R-205ENST00000373106 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms