RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 CLIP1P30622 1438 aa30.18■■■□□ 2.42
FOXP4-204ENST00000373063 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
FOXP4-204ENST00000373063 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.15■■■□□ 2.42
FOXP4-204ENST00000373063 RGL3Q3MIN7 710 aa30.11■■■□□ 2.41
FOXP4-204ENST00000373063 CFDP1Q9UEE9 299 aaPredicted RBP30.08■■■□□ 2.41
FOXP4-204ENST00000373063 NACADO15069 1562 aa30.06■■■□□ 2.4
FOXP4-204ENST00000373063 FKBP8Q14318 412 aa30.04■■■□□ 2.4
FOXP4-204ENST00000373063 MYH16Q9H6N6 1097 aa30.04■■■□□ 2.4
FOXP4-204ENST00000373063 MRS2Q9HD23 443 aa30.03■■■□□ 2.4
FOXP4-204ENST00000373063 ARXQ96QS3 562 aa30■■■□□ 2.39
FOXP4-204ENST00000373063 ANP32BQ92688 251 aaKnown RBP29.99■■■□□ 2.39
FOXP4-204ENST00000373063 LMOD2Q6P5Q4 547 aa29.98■■■□□ 2.39
FOXP4-204ENST00000373063 KIF27Q86VH2 1401 aa29.95■■■□□ 2.38
FOXP4-204ENST00000373063 GOLGA3Q08378 1498 aa29.95■■■□□ 2.38
FOXP4-204ENST00000373063 EIF4G2P78344 907 aaKnown RBP eCLIP29.95■■■□□ 2.383e-7■■■□□ 17
FOXP4-204ENST00000373063 WRNQ14191 1432 aaPredicted RBP eCLIP29.94■■■□□ 2.38
FOXP4-204ENST00000373063 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
FOXP4-204ENST00000373063 PPM1GO15355 546 aaPredicted RBP29.92■■■□□ 2.38
FOXP4-204ENST00000373063 CCDC136Q96JN2 1154 aa29.87■■■□□ 2.37
FOXP4-204ENST00000373063 CFAP53Q96M91 514 aa29.87■■■□□ 2.37
FOXP4-204ENST00000373063 POGKQ9P215 609 aa29.86■■■□□ 2.37
FOXP4-204ENST00000373063 ACIN1Q9UKV3 1341 aaKnown RBP29.86■■■□□ 2.37
FOXP4-204ENST00000373063 EEA1Q15075 1411 aa29.84■■■□□ 2.37
FOXP4-204ENST00000373063 MLECQ14165 292 aa29.83■■■□□ 2.37
FOXP4-204ENST00000373063 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
FOXP4-204ENST00000373063 CDCA8Q53HL2 280 aa29.82■■■□□ 2.36
FOXP4-204ENST00000373063 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
FOXP4-204ENST00000373063 KNSTRNQ9Y448 316 aa29.76■■■□□ 2.35
FOXP4-204ENST00000373063 NPHP1O15259 732 aa29.74■■■□□ 2.35
FOXP4-204ENST00000373063 CEP162Q5TB80 1403 aa29.73■■■□□ 2.35
FOXP4-204ENST00000373063 CARD11Q9BXL7 1154 aa29.71■■■□□ 2.35
FOXP4-204ENST00000373063 CCNB3Q8WWL7 1395 aa29.66■■■□□ 2.34
FOXP4-204ENST00000373063 KANK1Q14678 1352 aa29.65■■■□□ 2.34
FOXP4-204ENST00000373063 LAS1LQ9Y4W2 734 aaKnown RBP29.63■■■□□ 2.33
FOXP4-204ENST00000373063 CDK11BP21127 795 aaKnown RBP29.63■■■□□ 2.33
FOXP4-204ENST00000373063 HDGFP51858 240 aaKnown RBP29.62■■■□□ 2.33
FOXP4-204ENST00000373063 CEP164Q9UPV0 1460 aa29.62■■■□□ 2.33
FOXP4-204ENST00000373063 MAPK8IP3Q9UPT6 1336 aa29.62■■■□□ 2.33
FOXP4-204ENST00000373063 NUDCQ9Y266 331 aa29.56■■■□□ 2.32
FOXP4-204ENST00000373063 IRX6P78412 446 aaPredicted RBP29.56■■■□□ 2.32
FOXP4-204ENST00000373063 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
FOXP4-204ENST00000373063 TNNT2P45379 298 aaPredicted RBP29.54■■■□□ 2.32
FOXP4-204ENST00000373063 NEUROD2Q15784 382 aa29.53■■■□□ 2.32
FOXP4-204ENST00000373063 CUX2O14529 1486 aa29.51■■■□□ 2.31
FOXP4-204ENST00000373063 SENP3-EIF4A1A0A087X0R7 540 aa29.49■■■□□ 2.31
FOXP4-204ENST00000373063 FTSJ3Q8IY81 847 aaKnown RBP29.48■■■□□ 2.31
FOXP4-204ENST00000373063 CARMIL1Q5VZK9 1371 aa29.46■■■□□ 2.31
FOXP4-204ENST00000373063 GGT6Q6P531 493 aa29.45■■■□□ 2.3
FOXP4-204ENST00000373063 SOX12O15370 315 aa29.44■■■□□ 2.3
FOXP4-204ENST00000373063 TNIKQ9UKE5 1360 aa29.42■■■□□ 2.3
FOXP4-204ENST00000373063 U2SURPO15042 1029 aaKnown RBP29.42■■■□□ 2.3
FOXP4-204ENST00000373063 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
FOXP4-204ENST00000373063 SRPK2P78362 688 aaKnown RBP29.4■■■□□ 2.3
FOXP4-204ENST00000373063 CASC1Q6TDU7 716 aa29.39■■■□□ 2.3
FOXP4-204ENST00000373063 CC2D1BQ5T0F9 858 aaKnown RBP29.37■■■□□ 2.29
FOXP4-204ENST00000373063 SAFB2Q14151 953 aaKnown RBP eCLIP29.37■■■□□ 2.29
FOXP4-204ENST00000373063 CARMIL2Q6F5E8 1435 aa29.37■■■□□ 2.29
FOXP4-204ENST00000373063 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
FOXP4-204ENST00000373063 NCLP19338 710 aaKnown RBP29.36■■■□□ 2.29
FOXP4-204ENST00000373063 MIER1Q8N108 512 aa29.35■■■□□ 2.29
FOXP4-204ENST00000373063 DCAF11Q8TEB1 546 aa29.35■■■□□ 2.29
FOXP4-204ENST00000373063 TULP1O00294 542 aaPredicted RBP29.34■■■□□ 2.29
FOXP4-204ENST00000373063 OS9Q13438 667 aaPredicted RBP29.32■■■□□ 2.28
FOXP4-204ENST00000373063 PNNQ9H307 717 aaKnown RBP29.32■■■□□ 2.28
FOXP4-204ENST00000373063 TMF1P82094 1093 aa29.3■■■□□ 2.28
FOXP4-204ENST00000373063 GOLGA2Q08379 1002 aa29.29■■■□□ 2.28
FOXP4-204ENST00000373063 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
FOXP4-204ENST00000373063 STK26Q9P289 416 aa29.29■■■□□ 2.28
FOXP4-204ENST00000373063 BECN1Q14457 450 aa29.27■■■□□ 2.28
FOXP4-204ENST00000373063 NBR1Q14596 966 aa29.27■■■□□ 2.28
FOXP4-204ENST00000373063 SIN3AQ96ST3 1273 aa29.27■■■□□ 2.28
FOXP4-204ENST00000373063 PAK3O75914 559 aaPredicted RBP29.22■■■□□ 2.27
FOXP4-204ENST00000373063 FRAT1Q92837 279 aaPredicted RBP29.22■■■□□ 2.27
FOXP4-204ENST00000373063 TAOK2Q9UL54 1235 aa29.22■■■□□ 2.27
FOXP4-204ENST00000373063 ZRSR1Q15695 479 aaKnown RBP29.2■■■□□ 2.26
FOXP4-204ENST00000373063 SOGA1O94964 1423 aa29.19■■■□□ 2.26
FOXP4-204ENST00000373063 CSB-PGBD3P0DP91 1061 aa29.16■■■□□ 2.26
FOXP4-204ENST00000373063 TPRNQ4KMQ1 711 aa29.15■■■□□ 2.26
FOXP4-204ENST00000373063 MORC1Q86VD1 984 aa29.15■■■□□ 2.26
FOXP4-204ENST00000373063 DDRGK1Q96HY6 314 aa29.14■■■□□ 2.26
FOXP4-204ENST00000373063 CHMP4BQ9H444 224 aaKnown RBP29.14■■■□□ 2.26
FOXP4-204ENST00000373063 GOLGA6L22H0YM25 854 aa29.14■■■□□ 2.26
FOXP4-204ENST00000373063 EIF5BO60841 1220 aaKnown RBP29.14■■■□□ 2.26
FOXP4-204ENST00000373063 EFCAB2Q5VUJ9 269 aa29.13■■■□□ 2.25
FOXP4-204ENST00000373063 HDGFL2Q7Z4V5 671 aaPredicted RBP29.13■■■□□ 2.25
FOXP4-204ENST00000373063 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
FOXP4-204ENST00000373063 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
FOXP4-204ENST00000373063 CCDC9Q9Y3X0 531 aaKnown RBP29.12■■■□□ 2.25
FOXP4-204ENST00000373063 RTF1Q92541 710 aaKnown RBP29.11■■■□□ 2.25
FOXP4-204ENST00000373063 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
FOXP4-204ENST00000373063 ARHGAP35Q9NRY4 1499 aa29.08■■■□□ 2.25
FOXP4-204ENST00000373063 FGD1P98174 961 aa29.08■■■□□ 2.25
FOXP4-204ENST00000373063 MS4A1P11836 297 aa29.06■■■□□ 2.24
FOXP4-204ENST00000373063 PKD2Q13563 968 aa29.05■■■□□ 2.24
FOXP4-204ENST00000373063 KCNJ4P48050 445 aa29.05■■■□□ 2.24
FOXP4-204ENST00000373063 NAP1L2Q9ULW6 460 aaPredicted RBP29.04■■■□□ 2.24
FOXP4-204ENST00000373063 EID1Q9Y6B2 187 aa29.02■■■□□ 2.24
FOXP4-204ENST00000373063 ZNF330Q9Y3S2 320 aaPredicted RBP28.99■■■□□ 2.23
FOXP4-204ENST00000373063 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
FOXP4-204ENST00000373063 KIF3BO15066 747 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms