RNA–Protein interactions for RNA: ENST00000372647.6

CUL9-202, Transcript of cullin 9, humanhuman

TSL 1 (best) BASIC

Gene CUL9, Length 7,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-202ENST00000372647 NBR1Q14596 966 aa13.68□□□□□ -0.22
CUL9-202ENST00000372647 RRP7BPQ9NSQ0 103 aa13.68□□□□□ -0.22
CUL9-202ENST00000372647 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
CUL9-202ENST00000372647 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
CUL9-202ENST00000372647 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
CUL9-202ENST00000372647 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
CUL9-202ENST00000372647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
CUL9-202ENST00000372647 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
CUL9-202ENST00000372647 TMC1Q8TDI8 760 aa13.62□□□□□ -0.23
CUL9-202ENST00000372647 NEFMP07197 916 aa13.62□□□□□ -0.23
CUL9-202ENST00000372647 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
CUL9-202ENST00000372647 KCNH8Q96L42 1107 aa13.58□□□□□ -0.24
CUL9-202ENST00000372647 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
CUL9-202ENST00000372647 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
CUL9-202ENST00000372647 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
CUL9-202ENST00000372647 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
CUL9-202ENST00000372647 ARID4BQ4LE39 1312 aaPredicted RBP13.53□□□□□ -0.24
CUL9-202ENST00000372647 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
CUL9-202ENST00000372647 SENP3Q9H4L4 574 aaPredicted RBP13.52□□□□□ -0.25
CUL9-202ENST00000372647 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
CUL9-202ENST00000372647 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
CUL9-202ENST00000372647 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
CUL9-202ENST00000372647 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
CUL9-202ENST00000372647 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
CUL9-202ENST00000372647 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
CUL9-202ENST00000372647 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
CUL9-202ENST00000372647 PLEKHG5O94827 1062 aa13.46□□□□□ -0.26
CUL9-202ENST00000372647 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.26
CUL9-202ENST00000372647 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
CUL9-202ENST00000372647 A0A0G2JS52 829 aa13.44□□□□□ -0.26
CUL9-202ENST00000372647 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
CUL9-202ENST00000372647 ARXQ96QS3 562 aa13.44□□□□□ -0.26
CUL9-202ENST00000372647 CUX2O14529 1486 aa13.43□□□□□ -0.26
CUL9-202ENST00000372647 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
CUL9-202ENST00000372647 ANP32EQ9BTT0 268 aa13.43□□□□□ -0.26
CUL9-202ENST00000372647 RGL3Q3MIN7 710 aa13.42□□□□□ -0.26
CUL9-202ENST00000372647 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
CUL9-202ENST00000372647 PLEKHD1A6NEE1 506 aa13.4□□□□□ -0.26
CUL9-202ENST00000372647 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
CUL9-202ENST00000372647 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
CUL9-202ENST00000372647 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
CUL9-202ENST00000372647 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
CUL9-202ENST00000372647 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
CUL9-202ENST00000372647 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
CUL9-202ENST00000372647 SMARCA2P51531 1590 aa13.36□□□□□ -0.27
CUL9-202ENST00000372647 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
CUL9-202ENST00000372647 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
CUL9-202ENST00000372647 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
CUL9-202ENST00000372647 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
CUL9-202ENST00000372647 FOXD1Q16676 465 aa13.36□□□□□ -0.27
CUL9-202ENST00000372647 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
CUL9-202ENST00000372647 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
CUL9-202ENST00000372647 CARD11Q9BXL7 1154 aa13.33□□□□□ -0.28
CUL9-202ENST00000372647 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.28
CUL9-202ENST00000372647 HAP1P54257 671 aaPredicted RBP13.31□□□□□ -0.28
CUL9-202ENST00000372647 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
CUL9-202ENST00000372647 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
CUL9-202ENST00000372647 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
CUL9-202ENST00000372647 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
CUL9-202ENST00000372647 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
CUL9-202ENST00000372647 MLECQ14165 292 aa13.22□□□□□ -0.29
CUL9-202ENST00000372647 KNSTRNQ9Y448 316 aa13.22□□□□□ -0.29
CUL9-202ENST00000372647 CCER2I3L3R5 266 aa13.22□□□□□ -0.29
CUL9-202ENST00000372647 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
CUL9-202ENST00000372647 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
CUL9-202ENST00000372647 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.29
CUL9-202ENST00000372647 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
CUL9-202ENST00000372647 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
CUL9-202ENST00000372647 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
CUL9-202ENST00000372647 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
CUL9-202ENST00000372647 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
CUL9-202ENST00000372647 FHOD3Q2V2M9 1422 aa13.19□□□□□ -0.3
CUL9-202ENST00000372647 TNNT2P45379 298 aaPredicted RBP13.19□□□□□ -0.3
CUL9-202ENST00000372647 PRDM2Q13029 1718 aa13.17□□□□□ -0.3
CUL9-202ENST00000372647 RGS3P49796 1198 aa13.17□□□□□ -0.3
CUL9-202ENST00000372647 LMOD2Q6P5Q4 547 aa13.16□□□□□ -0.3
CUL9-202ENST00000372647 PDS5BQ9NTI5 1447 aa13.15□□□□□ -0.3
CUL9-202ENST00000372647 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
CUL9-202ENST00000372647 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
CUL9-202ENST00000372647 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
CUL9-202ENST00000372647 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
CUL9-202ENST00000372647 BECN1Q14457 450 aa13.13□□□□□ -0.31
CUL9-202ENST00000372647 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
CUL9-202ENST00000372647 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
CUL9-202ENST00000372647 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
CUL9-202ENST00000372647 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
CUL9-202ENST00000372647 KIF21BO75037 1637 aa13.11□□□□□ -0.31
CUL9-202ENST00000372647 PKD2Q13563 968 aa13.11□□□□□ -0.31
CUL9-202ENST00000372647 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
CUL9-202ENST00000372647 DEKP35659 375 aaKnown RBP13.09□□□□□ -0.31
CUL9-202ENST00000372647 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
CUL9-202ENST00000372647 CDCA8Q53HL2 280 aa13.07□□□□□ -0.32
CUL9-202ENST00000372647 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
CUL9-202ENST00000372647 POGKQ9P215 609 aa13.07□□□□□ -0.32
CUL9-202ENST00000372647 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
CUL9-202ENST00000372647 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
CUL9-202ENST00000372647 TMF1P82094 1093 aa13.06□□□□□ -0.32
CUL9-202ENST00000372647 TPRNQ4KMQ1 711 aa13.04□□□□□ -0.32
CUL9-202ENST00000372647 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
CUL9-202ENST00000372647 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms