RNA–Protein interactions for RNA: ENST00000371837.5

LIPA-203, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 2 BASIC

Gene LIPA, Length 2,513 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-203ENST00000371837 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
LIPA-203ENST00000371837 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
LIPA-203ENST00000371837 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
LIPA-203ENST00000371837 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
LIPA-203ENST00000371837 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
LIPA-203ENST00000371837 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
LIPA-203ENST00000371837 NECTIN2Q92692 538 aa11.89□□□□□ -0.51
LIPA-203ENST00000371837 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
LIPA-203ENST00000371837 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
LIPA-203ENST00000371837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
LIPA-203ENST00000371837 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
LIPA-203ENST00000371837 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
LIPA-203ENST00000371837 ZMYND15Q9H091 742 aa11.85□□□□□ -0.51
LIPA-203ENST00000371837 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
LIPA-203ENST00000371837 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
LIPA-203ENST00000371837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
LIPA-203ENST00000371837 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
LIPA-203ENST00000371837 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
LIPA-203ENST00000371837 EIF5BO60841 1220 aaKnown RBP11.8□□□□□ -0.52
LIPA-203ENST00000371837 IGSF3O75054 1194 aa11.8□□□□□ -0.52
LIPA-203ENST00000371837 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
LIPA-203ENST00000371837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.52
LIPA-203ENST00000371837 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
LIPA-203ENST00000371837 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
LIPA-203ENST00000371837 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
LIPA-203ENST00000371837 SLC24A3Q9HC58 644 aa11.76□□□□□ -0.53
LIPA-203ENST00000371837 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
LIPA-203ENST00000371837 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
LIPA-203ENST00000371837 RNF25Q96BH1 459 aaPredicted RBP11.69□□□□□ -0.54
LIPA-203ENST00000371837 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
LIPA-203ENST00000371837 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
LIPA-203ENST00000371837 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
LIPA-203ENST00000371837 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.54
LIPA-203ENST00000371837 APBB1O00213 710 aa11.61□□□□□ -0.55
LIPA-203ENST00000371837 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
LIPA-203ENST00000371837 GPBP1L1Q9HC44 474 aaPredicted RBP11.57□□□□□ -0.56
LIPA-203ENST00000371837 ZNF428Q96B54 188 aa11.56□□□□□ -0.56
LIPA-203ENST00000371837 NCAPD3P42695 1498 aa11.55□□□□□ -0.56
LIPA-203ENST00000371837 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
LIPA-203ENST00000371837 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
LIPA-203ENST00000371837 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
LIPA-203ENST00000371837 IL27Q8NEV9 243 aa11.52□□□□□ -0.57
LIPA-203ENST00000371837 HMGXB3Q12766 1538 aa11.52□□□□□ -0.57
LIPA-203ENST00000371837 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
LIPA-203ENST00000371837 MKRN3Q13064 507 aaKnown RBP11.51□□□□□ -0.57
LIPA-203ENST00000371837 RAD21O60216 631 aa11.49□□□□□ -0.57
LIPA-203ENST00000371837 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
LIPA-203ENST00000371837 RGS22Q8NE09 1264 aa11.48□□□□□ -0.57
LIPA-203ENST00000371837 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
LIPA-203ENST00000371837 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.58
LIPA-203ENST00000371837 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.58
LIPA-203ENST00000371837 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.58
LIPA-203ENST00000371837 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
LIPA-203ENST00000371837 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
LIPA-203ENST00000371837 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
LIPA-203ENST00000371837 CUX2O14529 1486 aa11.44□□□□□ -0.58
LIPA-203ENST00000371837 ZMYND10O75800 440 aa11.42□□□□□ -0.58
LIPA-203ENST00000371837 FOXD4L5Q5VV16 416 aaPredicted RBP11.42□□□□□ -0.58
LIPA-203ENST00000371837 FOXD4L4Q8WXT5 416 aaPredicted RBP11.42□□□□□ -0.58
LIPA-203ENST00000371837 SEMA3EO15041 775 aa11.39□□□□□ -0.59
LIPA-203ENST00000371837 CDK11BP21127 795 aaKnown RBP11.39□□□□□ -0.59
LIPA-203ENST00000371837 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
LIPA-203ENST00000371837 STK25O00506 426 aa11.38□□□□□ -0.59
LIPA-203ENST00000371837 POLA2Q14181 598 aa11.38□□□□□ -0.59
LIPA-203ENST00000371837 MIER1Q8N108 512 aa11.38□□□□□ -0.59
LIPA-203ENST00000371837 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
LIPA-203ENST00000371837 BAZ1BQ9UIG0 1483 aaKnown RBP11.37□□□□□ -0.59
LIPA-203ENST00000371837 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
LIPA-203ENST00000371837 RBM25P49756 843 aaKnown RBP11.35□□□□□ -0.59
LIPA-203ENST00000371837 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
LIPA-203ENST00000371837 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
LIPA-203ENST00000371837 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
LIPA-203ENST00000371837 MROH2BQ7Z745 1585 aa11.31□□□□□ -0.6
LIPA-203ENST00000371837 HSP90B1P14625 803 aaKnown RBP11.31□□□□□ -0.6
LIPA-203ENST00000371837 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
LIPA-203ENST00000371837 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
LIPA-203ENST00000371837 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
LIPA-203ENST00000371837 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
LIPA-203ENST00000371837 NESP48681 1621 aa11.28□□□□□ -0.6
LIPA-203ENST00000371837 CLUAP1Q96AJ1 413 aa11.28□□□□□ -0.6
LIPA-203ENST00000371837 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
LIPA-203ENST00000371837 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
LIPA-203ENST00000371837 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
LIPA-203ENST00000371837 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
LIPA-203ENST00000371837 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
LIPA-203ENST00000371837 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
LIPA-203ENST00000371837 PUS7Q96PZ0 661 aaKnown RBP11.23□□□□□ -0.61
LIPA-203ENST00000371837 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
LIPA-203ENST00000371837 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
LIPA-203ENST00000371837 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
LIPA-203ENST00000371837 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
LIPA-203ENST00000371837 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
LIPA-203ENST00000371837 FAM117AQ9C073 453 aa11.2□□□□□ -0.62
LIPA-203ENST00000371837 WIZO95785 1651 aa11.2□□□□□ -0.62
LIPA-203ENST00000371837 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
LIPA-203ENST00000371837 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
LIPA-203ENST00000371837 TRAK2O60296 914 aa11.18□□□□□ -0.62
LIPA-203ENST00000371837 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
LIPA-203ENST00000371837 AK7Q96M32 723 aa11.17□□□□□ -0.62
LIPA-203ENST00000371837 KIF21AQ7Z4S6 1674 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms