RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 NEFMP07197 916 aa15.45■□□□□ 0.06
PLXNA3-201ENST00000369682 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
PLXNA3-201ENST00000369682 NAP1L5Q96NT1 182 aaPredicted RBP15.43■□□□□ 0.06
PLXNA3-201ENST00000369682 RRP7BPQ9NSQ0 103 aa15.43■□□□□ 0.06
PLXNA3-201ENST00000369682 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
PLXNA3-201ENST00000369682 CLIP1P30622 1438 aa15.38■□□□□ 0.05
PLXNA3-201ENST00000369682 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
PLXNA3-201ENST00000369682 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
PLXNA3-201ENST00000369682 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
PLXNA3-201ENST00000369682 ARID3AQ99856 593 aa15.36■□□□□ 0.05
PLXNA3-201ENST00000369682 RGS3P49796 1198 aa15.36■□□□□ 0.05
PLXNA3-201ENST00000369682 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
PLXNA3-201ENST00000369682 NCLP19338 710 aaKnown RBP15.35■□□□□ 0.05
PLXNA3-201ENST00000369682 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.053e-7■■□□□ 12
PLXNA3-201ENST00000369682 SPRYD3Q8NCJ5 442 aa15.34■□□□□ 0.05
PLXNA3-201ENST00000369682 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.05
PLXNA3-201ENST00000369682 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
PLXNA3-201ENST00000369682 RBM19Q9Y4C8 960 aaKnown RBP15.32■□□□□ 0.04
PLXNA3-201ENST00000369682 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
PLXNA3-201ENST00000369682 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.03
PLXNA3-201ENST00000369682 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
PLXNA3-201ENST00000369682 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
PLXNA3-201ENST00000369682 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
PLXNA3-201ENST00000369682 PTMAP06454 111 aaKnown RBP15.23■□□□□ 0.03
PLXNA3-201ENST00000369682 BECN1Q14457 450 aa15.22■□□□□ 0.03
PLXNA3-201ENST00000369682 GOLGA3Q08378 1498 aa15.22■□□□□ 0.03
PLXNA3-201ENST00000369682 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.034e-6■□□□□ 9.7
PLXNA3-201ENST00000369682 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
PLXNA3-201ENST00000369682 NEUROD2Q15784 382 aa15.21■□□□□ 0.02
PLXNA3-201ENST00000369682 TAOK2Q9UL54 1235 aa15.21■□□□□ 0.02
PLXNA3-201ENST00000369682 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
PLXNA3-201ENST00000369682 RGL3Q3MIN7 710 aa15.2■□□□□ 0.02
PLXNA3-201ENST00000369682 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
PLXNA3-201ENST00000369682 CC2D1BQ5T0F9 858 aaKnown RBP15.17■□□□□ 0.02
PLXNA3-201ENST00000369682 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
PLXNA3-201ENST00000369682 DNTTIP2Q5QJE6 756 aaKnown RBP15.15■□□□□ 0.02
PLXNA3-201ENST00000369682 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
PLXNA3-201ENST00000369682 NACADO15069 1562 aa15.13■□□□□ 0.01
PLXNA3-201ENST00000369682 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
PLXNA3-201ENST00000369682 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
PLXNA3-201ENST00000369682 GZF1Q9H116 711 aaPredicted RBP15.11■□□□□ 0.01
PLXNA3-201ENST00000369682 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
PLXNA3-201ENST00000369682 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
PLXNA3-201ENST00000369682 PPM1GO15355 546 aaPredicted RBP15.09■□□□□ 0.01
PLXNA3-201ENST00000369682 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
PLXNA3-201ENST00000369682 FOXD1Q16676 465 aa15.08■□□□□ 0
PLXNA3-201ENST00000369682 PLCB2Q00722 1185 aa15.08■□□□□ 0
PLXNA3-201ENST00000369682 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0
PLXNA3-201ENST00000369682 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
PLXNA3-201ENST00000369682 A0A0G2JS52 829 aa15.05■□□□□ -0
PLXNA3-201ENST00000369682 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
PLXNA3-201ENST00000369682 HSP90AB1P08238 724 aaKnown RBP15.03■□□□□ -0
PLXNA3-201ENST00000369682 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
PLXNA3-201ENST00000369682 EEA1Q15075 1411 aa15.03■□□□□ -0
PLXNA3-201ENST00000369682 WIZO95785 1651 aa15.02□□□□□ -0.01
PLXNA3-201ENST00000369682 GOLGA6L22H0YM25 854 aa15.02□□□□□ -0.01
PLXNA3-201ENST00000369682 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
PLXNA3-201ENST00000369682 TULP1O00294 542 aaPredicted RBP14.99□□□□□ -0.01
PLXNA3-201ENST00000369682 CARD11Q9BXL7 1154 aa14.98□□□□□ -0.01
PLXNA3-201ENST00000369682 C14orf37Q86TY3 774 aa14.98□□□□□ -0.01
PLXNA3-201ENST00000369682 SOGA1O94964 1423 aa14.98□□□□□ -0.01
PLXNA3-201ENST00000369682 ESF1Q9H501 851 aaKnown RBP14.97□□□□□ -0.01
PLXNA3-201ENST00000369682 SLC4A3P48751 1232 aa14.96□□□□□ -0.01
PLXNA3-201ENST00000369682 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
PLXNA3-201ENST00000369682 HSPA5P11021 654 aaKnown RBP14.96□□□□□ -0.02
PLXNA3-201ENST00000369682 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
PLXNA3-201ENST00000369682 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
PLXNA3-201ENST00000369682 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
PLXNA3-201ENST00000369682 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
PLXNA3-201ENST00000369682 APBB1O00213 710 aa14.94□□□□□ -0.02
PLXNA3-201ENST00000369682 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
PLXNA3-201ENST00000369682 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
PLXNA3-201ENST00000369682 TIMELESSQ9UNS1 1208 aa14.92□□□□□ -0.02
PLXNA3-201ENST00000369682 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
PLXNA3-201ENST00000369682 HSCBQ8IWL3 235 aa14.89□□□□□ -0.03
PLXNA3-201ENST00000369682 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
PLXNA3-201ENST00000369682 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
PLXNA3-201ENST00000369682 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
PLXNA3-201ENST00000369682 NAP1L2Q9ULW6 460 aaPredicted RBP14.88□□□□□ -0.03
PLXNA3-201ENST00000369682 U2SURPO15042 1029 aaKnown RBP14.86□□□□□ -0.03
PLXNA3-201ENST00000369682 FOXD4L5Q5VV16 416 aaPredicted RBP14.86□□□□□ -0.03
PLXNA3-201ENST00000369682 FOXD4L4Q8WXT5 416 aaPredicted RBP14.86□□□□□ -0.03
PLXNA3-201ENST00000369682 CASC1Q6TDU7 716 aa14.84□□□□□ -0.03
PLXNA3-201ENST00000369682 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
PLXNA3-201ENST00000369682 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
PLXNA3-201ENST00000369682 L1TD1Q5T7N2 865 aaKnown RBP14.84□□□□□ -0.03
PLXNA3-201ENST00000369682 MSNP26038 577 aaKnown RBP14.83□□□□□ -0.04
PLXNA3-201ENST00000369682 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.04
PLXNA3-201ENST00000369682 IPO9Q96P70 1041 aaKnown RBP14.83□□□□□ -0.04
PLXNA3-201ENST00000369682 RCAN3Q9UKA8 241 aa14.82□□□□□ -0.04
PLXNA3-201ENST00000369682 PLIN1O60240 522 aa14.81□□□□□ -0.04
PLXNA3-201ENST00000369682 SOX12O15370 315 aa14.81□□□□□ -0.04
PLXNA3-201ENST00000369682 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
PLXNA3-201ENST00000369682 RAB3GAP2Q9H2M9 1393 aa14.8□□□□□ -0.04
PLXNA3-201ENST00000369682 MFAP1P55081 439 aaKnown RBP14.8□□□□□ -0.04
PLXNA3-201ENST00000369682 ZRSR1Q15695 479 aaKnown RBP14.8□□□□□ -0.04
PLXNA3-201ENST00000369682 DRC7Q8IY82 874 aa14.8□□□□□ -0.04
PLXNA3-201ENST00000369682 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
PLXNA3-201ENST00000369682 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
PLXNA3-201ENST00000369682 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms