RNA–Protein interactions for RNA: ENST00000369075.7

SEC23IP-201, Transcript of SEC23 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23IP, Length 7,168 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-201ENST00000369075 NEFMP07197 916 aa11.21□□□□□ -0.62
SEC23IP-201ENST00000369075 SENP3Q9H4L4 574 aaPredicted RBP11.21□□□□□ -0.62
SEC23IP-201ENST00000369075 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.62
SEC23IP-201ENST00000369075 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
SEC23IP-201ENST00000369075 ERCC6Q03468 1493 aa11.2□□□□□ -0.62
SEC23IP-201ENST00000369075 TSPY4P0CV99 314 aa11.2□□□□□ -0.62
SEC23IP-201ENST00000369075 TSPY10P0CW01 314 aa11.2□□□□□ -0.62
SEC23IP-201ENST00000369075 MIER1Q8N108 512 aa11.2□□□□□ -0.62
SEC23IP-201ENST00000369075 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
SEC23IP-201ENST00000369075 CUX2O14529 1486 aa11.15□□□□□ -0.62
SEC23IP-201ENST00000369075 TOP2AP11388 1531 aaKnown RBP11.13□□□□□ -0.63
SEC23IP-201ENST00000369075 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
SEC23IP-201ENST00000369075 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
SEC23IP-201ENST00000369075 TMC1Q8TDI8 760 aa11.12□□□□□ -0.63
SEC23IP-201ENST00000369075 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
SEC23IP-201ENST00000369075 IRX6P78412 446 aaPredicted RBP11.1□□□□□ -0.63
SEC23IP-201ENST00000369075 CARMIL1Q5VZK9 1371 aa11.1□□□□□ -0.63
SEC23IP-201ENST00000369075 CFDP1Q9UEE9 299 aaPredicted RBP11.09□□□□□ -0.63
SEC23IP-201ENST00000369075 ANP32AP39687 249 aaKnown RBP11.09□□□□□ -0.63
SEC23IP-201ENST00000369075 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEC23IP-201ENST00000369075 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
SEC23IP-201ENST00000369075 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
SEC23IP-201ENST00000369075 SCAF1Q9H7N4 1312 aaKnown RBP11.08□□□□□ -0.64
SEC23IP-201ENST00000369075 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
SEC23IP-201ENST00000369075 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
SEC23IP-201ENST00000369075 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
SEC23IP-201ENST00000369075 CCNB3Q8WWL7 1395 aa11.02□□□□□ -0.64
SEC23IP-201ENST00000369075 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.65
SEC23IP-201ENST00000369075 KANK4Q5T7N3 995 aaPredicted RBP11.01□□□□□ -0.65
SEC23IP-201ENST00000369075 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
SEC23IP-201ENST00000369075 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
SEC23IP-201ENST00000369075 VPS8Q8N3P4 1428 aa10.99□□□□□ -0.65
SEC23IP-201ENST00000369075 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
SEC23IP-201ENST00000369075 ZBTB7CA1YPR0 619 aa10.99□□□□□ -0.65
SEC23IP-201ENST00000369075 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
SEC23IP-201ENST00000369075 CARD11Q9BXL7 1154 aa10.98□□□□□ -0.65
SEC23IP-201ENST00000369075 TDRD9Q8NDG6 1382 aaKnown RBP10.96□□□□□ -0.66
SEC23IP-201ENST00000369075 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
SEC23IP-201ENST00000369075 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
SEC23IP-201ENST00000369075 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
SEC23IP-201ENST00000369075 ATAD2BQ9ULI0 1458 aa10.94□□□□□ -0.66
SEC23IP-201ENST00000369075 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
SEC23IP-201ENST00000369075 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
SEC23IP-201ENST00000369075 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
SEC23IP-201ENST00000369075 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
SEC23IP-201ENST00000369075 FOXD1Q16676 465 aa10.92□□□□□ -0.66
SEC23IP-201ENST00000369075 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.66
SEC23IP-201ENST00000369075 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
SEC23IP-201ENST00000369075 UPF2Q9HAU5 1272 aaKnown RBP10.9□□□□□ -0.66
SEC23IP-201ENST00000369075 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.67
SEC23IP-201ENST00000369075 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.67
SEC23IP-201ENST00000369075 NBR1Q14596 966 aa10.89□□□□□ -0.67
SEC23IP-201ENST00000369075 DCAF11Q8TEB1 546 aa10.88□□□□□ -0.67
SEC23IP-201ENST00000369075 SUPT16HQ9Y5B9 1047 aaKnown RBP10.88□□□□□ -0.67
SEC23IP-201ENST00000369075 CADPSQ9ULU8 1353 aa10.88□□□□□ -0.67
SEC23IP-201ENST00000369075 PPM1GO15355 546 aaPredicted RBP10.87□□□□□ -0.67
SEC23IP-201ENST00000369075 RAB3GAP2Q9H2M9 1393 aa10.87□□□□□ -0.67
SEC23IP-201ENST00000369075 TNNT2P45379 298 aaPredicted RBP10.87□□□□□ -0.67
SEC23IP-201ENST00000369075 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
SEC23IP-201ENST00000369075 CARMIL2Q6F5E8 1435 aa10.85□□□□□ -0.67
SEC23IP-201ENST00000369075 HSPA5P11021 654 aaKnown RBP10.84□□□□□ -0.67
SEC23IP-201ENST00000369075 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
SEC23IP-201ENST00000369075 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
SEC23IP-201ENST00000369075 A0A0G2JS52 829 aa10.83□□□□□ -0.68
SEC23IP-201ENST00000369075 KANK1Q14678 1352 aa10.83□□□□□ -0.68
SEC23IP-201ENST00000369075 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
SEC23IP-201ENST00000369075 CFAP53Q96M91 514 aa10.83□□□□□ -0.68
SEC23IP-201ENST00000369075 POGKQ9P215 609 aa10.83□□□□□ -0.68
SEC23IP-201ENST00000369075 PKD2Q13563 968 aa10.82□□□□□ -0.68
SEC23IP-201ENST00000369075 MLECQ14165 292 aa10.82□□□□□ -0.68
SEC23IP-201ENST00000369075 LAS1LQ9Y4W2 734 aaKnown RBP10.82□□□□□ -0.68
SEC23IP-201ENST00000369075 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
SEC23IP-201ENST00000369075 ARXQ96QS3 562 aa10.81□□□□□ -0.68
SEC23IP-201ENST00000369075 MPHOSPH9Q99550 1183 aa10.79□□□□□ -0.68
SEC23IP-201ENST00000369075 TMF1P82094 1093 aa10.78□□□□□ -0.68
SEC23IP-201ENST00000369075 SAFB2Q14151 953 aaKnown RBP eCLIP10.78□□□□□ -0.68
SEC23IP-201ENST00000369075 HNRNPMP52272 730 aaKnown RBP eCLIP10.78□□□□□ -0.68
SEC23IP-201ENST00000369075 GGT6Q6P531 493 aa10.76□□□□□ -0.69
SEC23IP-201ENST00000369075 MAPK8IP3Q9UPT6 1336 aa10.76□□□□□ -0.69
SEC23IP-201ENST00000369075 FGD5Q6ZNL6 1462 aa10.75□□□□□ -0.69
SEC23IP-201ENST00000369075 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
SEC23IP-201ENST00000369075 NUP155O75694 1391 aa10.75□□□□□ -0.69
SEC23IP-201ENST00000369075 RAD54L2Q9Y4B4 1467 aa10.75□□□□□ -0.69
SEC23IP-201ENST00000369075 FTSJ3Q8IY81 847 aaKnown RBP10.75□□□□□ -0.69
SEC23IP-201ENST00000369075 U2SURPO15042 1029 aaKnown RBP10.74□□□□□ -0.69
SEC23IP-201ENST00000369075 ANKRD30AQ9BXX3 1397 aa10.74□□□□□ -0.69
SEC23IP-201ENST00000369075 ANP32BQ92688 251 aaKnown RBP10.74□□□□□ -0.69
SEC23IP-201ENST00000369075 FRAT1Q92837 279 aaPredicted RBP10.74□□□□□ -0.69
SEC23IP-201ENST00000369075 STK26Q9P289 416 aa10.73□□□□□ -0.69
SEC23IP-201ENST00000369075 CCDC18Q5T9S5 1454 aa10.73□□□□□ -0.69
SEC23IP-201ENST00000369075 TRHP20396 242 aaPredicted RBP10.73□□□□□ -0.69
SEC23IP-201ENST00000369075 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
SEC23IP-201ENST00000369075 SRPK2P78362 688 aaKnown RBP10.73□□□□□ -0.69
SEC23IP-201ENST00000369075 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
SEC23IP-201ENST00000369075 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
SEC23IP-201ENST00000369075 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
SEC23IP-201ENST00000369075 PPP4R2Q9NY27 417 aa10.71□□□□□ -0.69
SEC23IP-201ENST00000369075 PRDM2Q13029 1718 aa10.71□□□□□ -0.7
SEC23IP-201ENST00000369075 SOX12O15370 315 aa10.71□□□□□ -0.7
SEC23IP-201ENST00000369075 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms