RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 FTSJ3Q8IY81 847 aaKnown RBP16.11■□□□□ 0.17
TPR-201ENST00000367478 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
TPR-201ENST00000367478 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
TPR-201ENST00000367478 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
TPR-201ENST00000367478 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
TPR-201ENST00000367478 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
TPR-201ENST00000367478 MS4A1P11836 297 aa16.09■□□□□ 0.17
TPR-201ENST00000367478 PTMSP20962 102 aa16.07■□□□□ 0.16
TPR-201ENST00000367478 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
TPR-201ENST00000367478 USP35Q9P2H5 1018 aa16.06■□□□□ 0.16
TPR-201ENST00000367478 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
TPR-201ENST00000367478 GOLGA6L4A6NEF3 574 aa16.04■□□□□ 0.16
TPR-201ENST00000367478 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
TPR-201ENST00000367478 KIAA2012Q0VF49 1180 aa16.04■□□□□ 0.16
TPR-201ENST00000367478 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
TPR-201ENST00000367478 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
TPR-201ENST00000367478 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
TPR-201ENST00000367478 FGD1P98174 961 aa16.03■□□□□ 0.16
TPR-201ENST00000367478 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
TPR-201ENST00000367478 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
TPR-201ENST00000367478 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
TPR-201ENST00000367478 A0A0G2JS52 829 aa15.99■□□□□ 0.15
TPR-201ENST00000367478 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
TPR-201ENST00000367478 MCCP23508 829 aa15.97■□□□□ 0.15
TPR-201ENST00000367478 TULP1O00294 542 aaPredicted RBP15.97■□□□□ 0.15
TPR-201ENST00000367478 HSCBQ8IWL3 235 aa15.96■□□□□ 0.15
TPR-201ENST00000367478 DRC7Q8IY82 874 aa15.96■□□□□ 0.15
TPR-201ENST00000367478 TNNT3P45378 269 aaPredicted RBP15.95■□□□□ 0.14
TPR-201ENST00000367478 KCNJ4P48050 445 aa15.95■□□□□ 0.14
TPR-201ENST00000367478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.144e-8■■■□□ 16.1
TPR-201ENST00000367478 KNSTRNQ9Y448 316 aa15.95■□□□□ 0.14
TPR-201ENST00000367478 IRX6P78412 446 aaPredicted RBP15.95■□□□□ 0.14
TPR-201ENST00000367478 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
TPR-201ENST00000367478 PPP4R2Q9NY27 417 aa15.93■□□□□ 0.14
TPR-201ENST00000367478 NOC3LQ8WTT2 800 aaKnown RBP15.92■□□□□ 0.14
TPR-201ENST00000367478 GOLGA6L1Q8N7Z2 621 aa15.92■□□□□ 0.14
TPR-201ENST00000367478 MAPK8IP3Q9UPT6 1336 aa15.91■□□□□ 0.14
TPR-201ENST00000367478 GOLGA2Q08379 1002 aa15.91■□□□□ 0.14
TPR-201ENST00000367478 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
TPR-201ENST00000367478 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
TPR-201ENST00000367478 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
TPR-201ENST00000367478 OS9Q13438 667 aaPredicted RBP15.88■□□□□ 0.13
TPR-201ENST00000367478 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
TPR-201ENST00000367478 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
TPR-201ENST00000367478 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
TPR-201ENST00000367478 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
TPR-201ENST00000367478 CCDC34Q96HJ3 373 aa15.87■□□□□ 0.13
TPR-201ENST00000367478 HAP1P54257 671 aaPredicted RBP15.87■□□□□ 0.13
TPR-201ENST00000367478 MIER1Q8N108 512 aa15.86■□□□□ 0.13
TPR-201ENST00000367478 GBP4Q96PP9 640 aa15.85■□□□□ 0.13
TPR-201ENST00000367478 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
TPR-201ENST00000367478 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
TPR-201ENST00000367478 TPM4P67936 248 aa15.84■□□□□ 0.13
TPR-201ENST00000367478 NPHP1O15259 732 aa15.84■□□□□ 0.13
TPR-201ENST00000367478 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
TPR-201ENST00000367478 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.13
TPR-201ENST00000367478 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
TPR-201ENST00000367478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.122e-7■□□□□ 10.9
TPR-201ENST00000367478 GNL2Q13823 731 aaKnown RBP15.82■□□□□ 0.12
TPR-201ENST00000367478 CLSTN1O94985 981 aa15.81■□□□□ 0.12
TPR-201ENST00000367478 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
TPR-201ENST00000367478 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
TPR-201ENST00000367478 SUPT16HQ9Y5B9 1047 aaKnown RBP15.81■□□□□ 0.12
TPR-201ENST00000367478 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
TPR-201ENST00000367478 CCDC180Q9P1Z9 1646 aa15.8■□□□□ 0.12
TPR-201ENST00000367478 ARID4BQ4LE39 1312 aaPredicted RBP15.79■□□□□ 0.12
TPR-201ENST00000367478 RGS3P49796 1198 aa15.78■□□□□ 0.12
TPR-201ENST00000367478 A0A0U1RQG5 324 aaPredicted RBP15.77■□□□□ 0.12
TPR-201ENST00000367478 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
TPR-201ENST00000367478 KIAA1211Q6ZU35 1233 aa15.76■□□□□ 0.11
TPR-201ENST00000367478 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
TPR-201ENST00000367478 ABCC9O60706 1549 aa15.75■□□□□ 0.11
TPR-201ENST00000367478 PHF14O94880 888 aa15.74■□□□□ 0.11
TPR-201ENST00000367478 DEKP35659 375 aaKnown RBP15.73■□□□□ 0.11
TPR-201ENST00000367478 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
TPR-201ENST00000367478 CALRP27797 417 aaKnown RBP15.71■□□□□ 0.11
TPR-201ENST00000367478 CHMP4AQ9BY43 222 aa15.71■□□□□ 0.11
TPR-201ENST00000367478 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
TPR-201ENST00000367478 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
TPR-201ENST00000367478 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
TPR-201ENST00000367478 CARD11Q9BXL7 1154 aa15.67■□□□□ 0.1
TPR-201ENST00000367478 CEP89Q96ST8 783 aa15.66■□□□□ 0.1
TPR-201ENST00000367478 CLIP1P30622 1438 aa15.66■□□□□ 0.1
TPR-201ENST00000367478 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
TPR-201ENST00000367478 PRM3Q9NNZ6 103 aa15.65■□□□□ 0.1
TPR-201ENST00000367478 TPM3P06753 285 aa15.64■□□□□ 0.09
TPR-201ENST00000367478 GPS2Q13227 327 aa15.64■□□□□ 0.09
TPR-201ENST00000367478 HDAC5Q9UQL6 1122 aa15.63■□□□□ 0.09
TPR-201ENST00000367478 NEUROD2Q15784 382 aa15.63■□□□□ 0.09
TPR-201ENST00000367478 EEA1Q15075 1411 aa15.62■□□□□ 0.09
TPR-201ENST00000367478 GPATCH3Q96I76 525 aa15.62■□□□□ 0.09
TPR-201ENST00000367478 GOLGA6L3A6NEY3 463 aa15.61■□□□□ 0.09
TPR-201ENST00000367478 CCDC70Q6NSX1 233 aa15.61■□□□□ 0.09
TPR-201ENST00000367478 POGKQ9P215 609 aa15.61■□□□□ 0.09
TPR-201ENST00000367478 KIF3AQ9Y496 699 aa15.61■□□□□ 0.09
TPR-201ENST00000367478 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
TPR-201ENST00000367478 ISY1Q9ULR0 285 aaKnown RBP15.59■□□□□ 0.09
TPR-201ENST00000367478 CHMP4CQ96CF2 233 aa15.59■□□□□ 0.09
TPR-201ENST00000367478 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.09
TPR-201ENST00000367478 RRP7BPQ9NSQ0 103 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms