RNA–Protein interactions for RNA: ENST00000367264.6

KDM5B-202, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best) BASIC

Gene KDM5B, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-202ENST00000367264 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
KDM5B-202ENST00000367264 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
KDM5B-202ENST00000367264 NBR1Q14596 966 aa18.94■□□□□ 0.62
KDM5B-202ENST00000367264 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
KDM5B-202ENST00000367264 IRX6P78412 446 aaPredicted RBP18.91■□□□□ 0.62
KDM5B-202ENST00000367264 TULP1O00294 542 aaPredicted RBP18.91■□□□□ 0.62
KDM5B-202ENST00000367264 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
KDM5B-202ENST00000367264 PPM1GO15355 546 aaPredicted RBP18.88■□□□□ 0.61
KDM5B-202ENST00000367264 RGL3Q3MIN7 710 aa18.88■□□□□ 0.61
KDM5B-202ENST00000367264 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
KDM5B-202ENST00000367264 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
KDM5B-202ENST00000367264 NPHP1O15259 732 aa18.8■□□□□ 0.6
KDM5B-202ENST00000367264 TPRNQ4KMQ1 711 aa18.8■□□□□ 0.6
KDM5B-202ENST00000367264 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
KDM5B-202ENST00000367264 TAOK2Q9UL54 1235 aa18.77■□□□□ 0.59
KDM5B-202ENST00000367264 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
KDM5B-202ENST00000367264 NCLP19338 710 aaKnown RBP18.75■□□□□ 0.59
KDM5B-202ENST00000367264 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
KDM5B-202ENST00000367264 CFAP53Q96M91 514 aa18.73■□□□□ 0.59
KDM5B-202ENST00000367264 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
KDM5B-202ENST00000367264 POGKQ9P215 609 aa18.67■□□□□ 0.58
KDM5B-202ENST00000367264 ZRSR1Q15695 479 aaKnown RBP18.66■□□□□ 0.58
KDM5B-202ENST00000367264 KNSTRNQ9Y448 316 aa18.66■□□□□ 0.58
KDM5B-202ENST00000367264 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
KDM5B-202ENST00000367264 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
KDM5B-202ENST00000367264 BECN1Q14457 450 aa18.65■□□□□ 0.58
KDM5B-202ENST00000367264 TNNT2P45379 298 aaPredicted RBP18.64■□□□□ 0.57
KDM5B-202ENST00000367264 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
KDM5B-202ENST00000367264 GLIPR1L2Q4G1C9 344 aa18.62■□□□□ 0.57
KDM5B-202ENST00000367264 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
KDM5B-202ENST00000367264 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
KDM5B-202ENST00000367264 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
KDM5B-202ENST00000367264 MIER1Q8N108 512 aa18.6■□□□□ 0.57
KDM5B-202ENST00000367264 CLIP1P30622 1438 aa18.59■□□□□ 0.57
KDM5B-202ENST00000367264 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
KDM5B-202ENST00000367264 CARD11Q9BXL7 1154 aa18.58■□□□□ 0.57
KDM5B-202ENST00000367264 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
KDM5B-202ENST00000367264 MLECQ14165 292 aa18.58■□□□□ 0.56
KDM5B-202ENST00000367264 OS9Q13438 667 aaPredicted RBP18.57■□□□□ 0.56
KDM5B-202ENST00000367264 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
KDM5B-202ENST00000367264 SOX12O15370 315 aa18.57■□□□□ 0.56
KDM5B-202ENST00000367264 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
KDM5B-202ENST00000367264 PTMAP06454 111 aaKnown RBP18.55■□□□□ 0.56
KDM5B-202ENST00000367264 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
KDM5B-202ENST00000367264 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
KDM5B-202ENST00000367264 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
KDM5B-202ENST00000367264 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
KDM5B-202ENST00000367264 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
KDM5B-202ENST00000367264 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
KDM5B-202ENST00000367264 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
KDM5B-202ENST00000367264 FGD1P98174 961 aa18.5■□□□□ 0.55
KDM5B-202ENST00000367264 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
KDM5B-202ENST00000367264 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
KDM5B-202ENST00000367264 PLCB2Q00722 1185 aa18.47■□□□□ 0.55
KDM5B-202ENST00000367264 KCNJ4P48050 445 aa18.46■□□□□ 0.55
KDM5B-202ENST00000367264 DNTTIP2Q5QJE6 756 aaKnown RBP18.46■□□□□ 0.55
KDM5B-202ENST00000367264 RGS3P49796 1198 aa18.44■□□□□ 0.54
KDM5B-202ENST00000367264 CLSTN1O94985 981 aa18.44■□□□□ 0.54
KDM5B-202ENST00000367264 ISY1Q9ULR0 285 aaKnown RBP18.44■□□□□ 0.54
KDM5B-202ENST00000367264 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
KDM5B-202ENST00000367264 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
KDM5B-202ENST00000367264 ANP32EQ9BTT0 268 aa18.41■□□□□ 0.54
KDM5B-202ENST00000367264 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
KDM5B-202ENST00000367264 SRPK2P78362 688 aaKnown RBP18.39■□□□□ 0.53
KDM5B-202ENST00000367264 HSP90AB1P08238 724 aaKnown RBP18.36■□□□□ 0.53
KDM5B-202ENST00000367264 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
KDM5B-202ENST00000367264 HDGFP51858 240 aaKnown RBP18.33■□□□□ 0.53
KDM5B-202ENST00000367264 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.53
KDM5B-202ENST00000367264 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.53
KDM5B-202ENST00000367264 STK26Q9P289 416 aa18.33■□□□□ 0.53
KDM5B-202ENST00000367264 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
KDM5B-202ENST00000367264 DCAF11Q8TEB1 546 aa18.32■□□□□ 0.52
KDM5B-202ENST00000367264 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
KDM5B-202ENST00000367264 KANK1Q14678 1352 aa18.31■□□□□ 0.52
KDM5B-202ENST00000367264 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
KDM5B-202ENST00000367264 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
KDM5B-202ENST00000367264 GGT6Q6P531 493 aa18.29■□□□□ 0.52
KDM5B-202ENST00000367264 TMF1P82094 1093 aa18.29■□□□□ 0.52
KDM5B-202ENST00000367264 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
KDM5B-202ENST00000367264 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
KDM5B-202ENST00000367264 CSB-PGBD3P0DP91 1061 aa18.28■□□□□ 0.52
KDM5B-202ENST00000367264 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
KDM5B-202ENST00000367264 GOLGA6L4A6NEF3 574 aa18.27■□□□□ 0.51
KDM5B-202ENST00000367264 MORC1Q86VD1 984 aa18.27■□□□□ 0.51
KDM5B-202ENST00000367264 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.51
KDM5B-202ENST00000367264 MS4A1P11836 297 aa18.26■□□□□ 0.51
KDM5B-202ENST00000367264 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
KDM5B-202ENST00000367264 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
KDM5B-202ENST00000367264 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
KDM5B-202ENST00000367264 APBB1O00213 710 aa18.25■□□□□ 0.51
KDM5B-202ENST00000367264 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
KDM5B-202ENST00000367264 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
KDM5B-202ENST00000367264 SPRYD3Q8NCJ5 442 aa18.21■□□□□ 0.51
KDM5B-202ENST00000367264 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
KDM5B-202ENST00000367264 NAP1L5Q96NT1 182 aaPredicted RBP18.19■□□□□ 0.5
KDM5B-202ENST00000367264 MCCP23508 829 aa18.18■□□□□ 0.5
KDM5B-202ENST00000367264 NRDCO43847 1150 aa18.17■□□□□ 0.5
KDM5B-202ENST00000367264 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
KDM5B-202ENST00000367264 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
KDM5B-202ENST00000367264 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms