RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
SCAF8-202ENST00000367186 WDR43Q15061 677 aaKnown RBP eCLIP13.98□□□□□ -0.173e-6■■■■□ 20.8
SCAF8-202ENST00000367186 A0A0G2JS52 829 aa13.98□□□□□ -0.17
SCAF8-202ENST00000367186 UNC13AQ9UPW8 1703 aa13.94□□□□□ -0.18
SCAF8-202ENST00000367186 SUPT16HQ9Y5B9 1047 aaKnown RBP13.9□□□□□ -0.18
SCAF8-202ENST00000367186 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
SCAF8-202ENST00000367186 ZBTB7CA1YPR0 619 aa13.88□□□□□ -0.19
SCAF8-202ENST00000367186 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
SCAF8-202ENST00000367186 TRIM44Q96DX7 344 aaPredicted RBP13.88□□□□□ -0.19
SCAF8-202ENST00000367186 RGL3Q3MIN7 710 aa13.87□□□□□ -0.19
SCAF8-202ENST00000367186 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
SCAF8-202ENST00000367186 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
SCAF8-202ENST00000367186 TAOK2Q9UL54 1235 aa13.84□□□□□ -0.19
SCAF8-202ENST00000367186 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
SCAF8-202ENST00000367186 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
SCAF8-202ENST00000367186 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
SCAF8-202ENST00000367186 EIF4G2P78344 907 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCAF8-202ENST00000367186 RGS3P49796 1198 aa13.82□□□□□ -0.2
SCAF8-202ENST00000367186 C14orf37Q86TY3 774 aa13.82□□□□□ -0.2
SCAF8-202ENST00000367186 ANP32EQ9BTT0 268 aa13.82□□□□□ -0.2
SCAF8-202ENST00000367186 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
SCAF8-202ENST00000367186 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
SCAF8-202ENST00000367186 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
SCAF8-202ENST00000367186 PTMAP06454 111 aaKnown RBP13.79□□□□□ -0.2
SCAF8-202ENST00000367186 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
SCAF8-202ENST00000367186 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
SCAF8-202ENST00000367186 BECN1Q14457 450 aa13.78□□□□□ -0.2
SCAF8-202ENST00000367186 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
SCAF8-202ENST00000367186 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
SCAF8-202ENST00000367186 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCAF8-202ENST00000367186 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
SCAF8-202ENST00000367186 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
SCAF8-202ENST00000367186 GOLGA6L22H0YM25 854 aa13.74□□□□□ -0.21
SCAF8-202ENST00000367186 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
SCAF8-202ENST00000367186 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-202ENST00000367186 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-202ENST00000367186 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
SCAF8-202ENST00000367186 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
SCAF8-202ENST00000367186 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.21
SCAF8-202ENST00000367186 ERICH6BQ5W0A0 696 aa13.69□□□□□ -0.22
SCAF8-202ENST00000367186 SIN3AQ96ST3 1273 aa13.69□□□□□ -0.22
SCAF8-202ENST00000367186 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
SCAF8-202ENST00000367186 FTSJ3Q8IY81 847 aaKnown RBP13.67□□□□□ -0.22
SCAF8-202ENST00000367186 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
SCAF8-202ENST00000367186 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
SCAF8-202ENST00000367186 PPP1R15AO75807 674 aaPredicted RBP13.65□□□□□ -0.22
SCAF8-202ENST00000367186 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
SCAF8-202ENST00000367186 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
SCAF8-202ENST00000367186 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
SCAF8-202ENST00000367186 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
SCAF8-202ENST00000367186 CARD11Q9BXL7 1154 aa13.62□□□□□ -0.23
SCAF8-202ENST00000367186 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
SCAF8-202ENST00000367186 CC2D1BQ5T0F9 858 aaKnown RBP13.61□□□□□ -0.23
SCAF8-202ENST00000367186 PPP4R2Q9NY27 417 aa13.61□□□□□ -0.23
SCAF8-202ENST00000367186 ARID3AQ99856 593 aa13.59□□□□□ -0.23
SCAF8-202ENST00000367186 CFAP53Q96M91 514 aa13.58□□□□□ -0.23
SCAF8-202ENST00000367186 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
SCAF8-202ENST00000367186 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
SCAF8-202ENST00000367186 DEKP35659 375 aaKnown RBP13.57□□□□□ -0.24
SCAF8-202ENST00000367186 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
SCAF8-202ENST00000367186 SOX12O15370 315 aa13.56□□□□□ -0.24
SCAF8-202ENST00000367186 FGD1P98174 961 aa13.56□□□□□ -0.24
SCAF8-202ENST00000367186 CLIP1P30622 1438 aa13.56□□□□□ -0.24
SCAF8-202ENST00000367186 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
SCAF8-202ENST00000367186 BAZ1AQ9NRL2 1556 aaPredicted RBP13.55□□□□□ -0.24
SCAF8-202ENST00000367186 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
SCAF8-202ENST00000367186 RBM19Q9Y4C8 960 aaKnown RBP13.53□□□□□ -0.24
SCAF8-202ENST00000367186 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
SCAF8-202ENST00000367186 KCNJ4P48050 445 aa13.53□□□□□ -0.24
SCAF8-202ENST00000367186 WIZO95785 1651 aa13.53□□□□□ -0.24
SCAF8-202ENST00000367186 CASC1Q6TDU7 716 aa13.52□□□□□ -0.24
SCAF8-202ENST00000367186 APBB1O00213 710 aa13.52□□□□□ -0.24
SCAF8-202ENST00000367186 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
SCAF8-202ENST00000367186 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
SCAF8-202ENST00000367186 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.25
SCAF8-202ENST00000367186 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.51□□□□□ -0.25
SCAF8-202ENST00000367186 OS9Q13438 667 aaPredicted RBP13.51□□□□□ -0.25
SCAF8-202ENST00000367186 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
SCAF8-202ENST00000367186 CFDP1Q9UEE9 299 aaPredicted RBP13.49□□□□□ -0.25
SCAF8-202ENST00000367186 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
SCAF8-202ENST00000367186 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCAF8-202ENST00000367186 GOLGA6L4A6NEF3 574 aa13.47□□□□□ -0.25
SCAF8-202ENST00000367186 POGKQ9P215 609 aa13.47□□□□□ -0.25
SCAF8-202ENST00000367186 NUDCQ9Y266 331 aa13.46□□□□□ -0.25
SCAF8-202ENST00000367186 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
SCAF8-202ENST00000367186 NPHP1O15259 732 aa13.43□□□□□ -0.26
SCAF8-202ENST00000367186 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
SCAF8-202ENST00000367186 HSCBQ8IWL3 235 aa13.42□□□□□ -0.26
SCAF8-202ENST00000367186 MSNP26038 577 aaKnown RBP13.41□□□□□ -0.26
SCAF8-202ENST00000367186 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
SCAF8-202ENST00000367186 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
SCAF8-202ENST00000367186 CEP162Q5TB80 1403 aa13.4□□□□□ -0.27
SCAF8-202ENST00000367186 FOXD1Q16676 465 aa13.38□□□□□ -0.27
SCAF8-202ENST00000367186 NRDCO43847 1150 aa13.37□□□□□ -0.27
SCAF8-202ENST00000367186 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-202ENST00000367186 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
SCAF8-202ENST00000367186 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
SCAF8-202ENST00000367186 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
SCAF8-202ENST00000367186 CLSTN1O94985 981 aa13.34□□□□□ -0.27
SCAF8-202ENST00000367186 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms