RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CHAF1AQ13111 956 aaPredicted RBP21.84■■□□□ 1.09
NID1-202ENST00000366595 IRX6P78412 446 aaPredicted RBP21.83■■□□□ 1.09
NID1-202ENST00000366595 EIF4G2P78344 907 aaKnown RBP eCLIP21.8■■□□□ 1.08
NID1-202ENST00000366595 CHMP4BQ9H444 224 aaKnown RBP21.77■■□□□ 1.08
NID1-202ENST00000366595 MIER1Q8N108 512 aa21.77■■□□□ 1.08
NID1-202ENST00000366595 L1TD1Q5T7N2 865 aaKnown RBP21.76■■□□□ 1.07
NID1-202ENST00000366595 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
NID1-202ENST00000366595 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
NID1-202ENST00000366595 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
NID1-202ENST00000366595 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
NID1-202ENST00000366595 PPP4R2Q9NY27 417 aa21.7■■□□□ 1.06
NID1-202ENST00000366595 MSNP26038 577 aaKnown RBP21.69■■□□□ 1.06
NID1-202ENST00000366595 FTSJ3Q8IY81 847 aaKnown RBP21.69■■□□□ 1.06
NID1-202ENST00000366595 PLCB2Q00722 1185 aa21.68■■□□□ 1.06
NID1-202ENST00000366595 CDCA8Q53HL2 280 aa21.68■■□□□ 1.06
NID1-202ENST00000366595 NPM1P06748 294 aaKnown RBP eCLIP21.68■■□□□ 1.06
NID1-202ENST00000366595 MS4A1P11836 297 aa21.67■■□□□ 1.06
NID1-202ENST00000366595 HSP90AB1P08238 724 aaKnown RBP21.65■■□□□ 1.06
NID1-202ENST00000366595 KDM2AQ9Y2K7 1162 aa21.64■■□□□ 1.05
NID1-202ENST00000366595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.05
NID1-202ENST00000366595 RTN4Q9NQC3 1192 aaKnown RBP21.63■■□□□ 1.05
NID1-202ENST00000366595 LAS1LQ9Y4W2 734 aaKnown RBP21.63■■□□□ 1.05
NID1-202ENST00000366595 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
NID1-202ENST00000366595 CFAP44Q96MT7 982 aa21.6■■□□□ 1.05
NID1-202ENST00000366595 GOLGA6L4A6NEF3 574 aa21.6■■□□□ 1.05
NID1-202ENST00000366595 CHIC2Q9UKJ5 165 aa21.59■■□□□ 1.05
NID1-202ENST00000366595 PTMSP20962 102 aa21.58■■□□□ 1.05
NID1-202ENST00000366595 HSCBQ8IWL3 235 aa21.56■■□□□ 1.04
NID1-202ENST00000366595 SUPT16HQ9Y5B9 1047 aaKnown RBP21.55■■□□□ 1.04
NID1-202ENST00000366595 FGD1P98174 961 aa21.54■■□□□ 1.04
NID1-202ENST00000366595 KNSTRNQ9Y448 316 aa21.54■■□□□ 1.04
NID1-202ENST00000366595 TPRNQ4KMQ1 711 aa21.52■■□□□ 1.04
NID1-202ENST00000366595 MTUS2Q5JR59 1369 aa21.51■■□□□ 1.03
NID1-202ENST00000366595 MAPK8IP3Q9UPT6 1336 aa21.51■■□□□ 1.03
NID1-202ENST00000366595 A0A0G2JS52 829 aa21.5■■□□□ 1.03
NID1-202ENST00000366595 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
NID1-202ENST00000366595 RGS3P49796 1198 aa21.49■■□□□ 1.03
NID1-202ENST00000366595 MCCP23508 829 aa21.48■■□□□ 1.03
NID1-202ENST00000366595 DEKP35659 375 aaKnown RBP21.46■■□□□ 1.03
NID1-202ENST00000366595 KCNJ4P48050 445 aa21.46■■□□□ 1.03
NID1-202ENST00000366595 DRC7Q8IY82 874 aa21.46■■□□□ 1.03
NID1-202ENST00000366595 TNNT3P45378 269 aaPredicted RBP21.46■■□□□ 1.03
NID1-202ENST00000366595 KIAA2012Q0VF49 1180 aa21.46■■□□□ 1.03
NID1-202ENST00000366595 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
NID1-202ENST00000366595 TULP1O00294 542 aaPredicted RBP21.44■■□□□ 1.02
NID1-202ENST00000366595 PPP1R15AO75807 674 aaPredicted RBP21.42■■□□□ 1.02
NID1-202ENST00000366595 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
NID1-202ENST00000366595 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
NID1-202ENST00000366595 OS9Q13438 667 aaPredicted RBP21.4■■□□□ 1.02
NID1-202ENST00000366595 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.02
NID1-202ENST00000366595 USP35Q9P2H5 1018 aa21.39■■□□□ 1.02
NID1-202ENST00000366595 GBP4Q96PP9 640 aa21.39■■□□□ 1.01
NID1-202ENST00000366595 HIRIP3Q9BW71 556 aaPredicted RBP21.39■■□□□ 1.01
NID1-202ENST00000366595 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
NID1-202ENST00000366595 HTATSF1O43719 755 aaKnown RBP21.34■■□□□ 1.01
NID1-202ENST00000366595 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
NID1-202ENST00000366595 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
NID1-202ENST00000366595 NAP1L2Q9ULW6 460 aaPredicted RBP21.33■■□□□ 1.01
NID1-202ENST00000366595 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
NID1-202ENST00000366595 SYAP1Q96A49 352 aaPredicted RBP21.33■■□□□ 1.01
NID1-202ENST00000366595 GOLGA6L1Q8N7Z2 621 aa21.31■■□□□ 1
NID1-202ENST00000366595 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
NID1-202ENST00000366595 ABCC9O60706 1549 aa21.29■■□□□ 1
NID1-202ENST00000366595 NOC3LQ8WTT2 800 aaKnown RBP21.28■■□□□ 1
NID1-202ENST00000366595 GOLGA2Q08379 1002 aa21.27■■□□□ 1
NID1-202ENST00000366595 TPM4P67936 248 aa21.27■■□□□ 1
NID1-202ENST00000366595 NEUROD2Q15784 382 aa21.27■■□□□ 1
NID1-202ENST00000366595 CLIP1P30622 1438 aa21.26■□□□□ 0.99
NID1-202ENST00000366595 RRP7BPQ9NSQ0 103 aa21.25■□□□□ 0.99
NID1-202ENST00000366595 B4GALNT3Q6L9W6 998 aa21.23■□□□□ 0.99
NID1-202ENST00000366595 GNL2Q13823 731 aaKnown RBP21.23■□□□□ 0.99
NID1-202ENST00000366595 CCDC34Q96HJ3 373 aa21.23■□□□□ 0.99
NID1-202ENST00000366595 TAOK2Q9UL54 1235 aa21.22■□□□□ 0.99
NID1-202ENST00000366595 CLSTN1O94985 981 aa21.19■□□□□ 0.98
NID1-202ENST00000366595 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
NID1-202ENST00000366595 RBM19Q9Y4C8 960 aaKnown RBP21.18■□□□□ 0.98
NID1-202ENST00000366595 KIAA1211Q6ZU35 1233 aa21.18■□□□□ 0.98
NID1-202ENST00000366595 GOLGA6L3A6NEY3 463 aa21.18■□□□□ 0.98
NID1-202ENST00000366595 CCER2I3L3R5 266 aa21.17■□□□□ 0.98
NID1-202ENST00000366595 NPHP1O15259 732 aa21.17■□□□□ 0.98
NID1-202ENST00000366595 ARID4BQ4LE39 1312 aaPredicted RBP21.16■□□□□ 0.98
NID1-202ENST00000366595 CSPP1Q1MSJ5 1256 aa21.16■□□□□ 0.98
NID1-202ENST00000366595 SETQ01105 290 aaPredicted RBP21.15■□□□□ 0.98
NID1-202ENST00000366595 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
NID1-202ENST00000366595 IPO8O15397 1037 aaKnown RBP21.14■□□□□ 0.98
NID1-202ENST00000366595 A0A0U1RQG5 324 aaPredicted RBP21.13■□□□□ 0.97
NID1-202ENST00000366595 PLEKHD1A6NEE1 506 aa21.13■□□□□ 0.97
NID1-202ENST00000366595 EEA1Q15075 1411 aa21.13■□□□□ 0.97
NID1-202ENST00000366595 U2SURPO15042 1029 aaKnown RBP21.11■□□□□ 0.97
NID1-202ENST00000366595 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
NID1-202ENST00000366595 POGKQ9P215 609 aa21.1■□□□□ 0.97
NID1-202ENST00000366595 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
NID1-202ENST00000366595 RWDD1Q9H446 243 aaPredicted RBP21.09■□□□□ 0.97
NID1-202ENST00000366595 TMF1P82094 1093 aa21.08■□□□□ 0.97
NID1-202ENST00000366595 SPRYD3Q8NCJ5 442 aa21.08■□□□□ 0.97
NID1-202ENST00000366595 RSPH6AQ9H0K4 717 aa21.08■□□□□ 0.96
NID1-202ENST00000366595 PHF14O94880 888 aa21.07■□□□□ 0.96
NID1-202ENST00000366595 CHMP4AQ9BY43 222 aa21.06■□□□□ 0.96
NID1-202ENST00000366595 HSP90AA2PQ14568 343 aaPredicted RBP21.05■□□□□ 0.96
NID1-202ENST00000366595 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms