RNA–Protein interactions for RNA: ENST00000364385.1

RNU6-990P-201, Transcript of RNA, U6 small nuclear 990, pseudogene, humanhuman

BASIC

Gene RNU6-990P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-990P-201ENST00000364385 PABPN1Q86U42 306 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU6-990P-201ENST00000364385 SEC24BO95487 1268 aa3.03□□□□□ -1.92
RNU6-990P-201ENST00000364385 PHF12Q96QT6 1004 aa3.03□□□□□ -1.92
RNU6-990P-201ENST00000364385 SLAIN1Q8ND83 568 aa3.02□□□□□ -1.93
RNU6-990P-201ENST00000364385 NPM1P06748 294 aaKnown RBP eCLIP3□□□□□ -1.93
RNU6-990P-201ENST00000364385 MS4A3Q96HJ5 214 aa2.98□□□□□ -1.93
RNU6-990P-201ENST00000364385 ATN1P54259 1190 aaPredicted RBP2.97□□□□□ -1.93
RNU6-990P-201ENST00000364385 RNF166Q96A37 237 aaPredicted RBP2.97□□□□□ -1.93
RNU6-990P-201ENST00000364385 EMP3P54852 163 aa2.96□□□□□ -1.94
RNU6-990P-201ENST00000364385 MARVELD3Q96A59 401 aa2.95□□□□□ -1.94
RNU6-990P-201ENST00000364385 STAG3Q9UJ98 1225 aa2.95□□□□□ -1.94
RNU6-990P-201ENST00000364385 IER5LQ5T953 404 aa2.94□□□□□ -1.94
RNU6-990P-201ENST00000364385 FOXD4L1Q9NU39 408 aa2.94□□□□□ -1.94
RNU6-990P-201ENST00000364385 ATXN8OSP0DMR3 200 aa2.93□□□□□ -1.94
RNU6-990P-201ENST00000364385 CREBZFQ9NS37 354 aa2.93□□□□□ -1.94
RNU6-990P-201ENST00000364385 POTEFA5A3E0 1075 aa2.92□□□□□ -1.94
RNU6-990P-201ENST00000364385 TIE1P35590 1138 aa2.92□□□□□ -1.94
RNU6-990P-201ENST00000364385 PTGER2P43116 358 aa2.92□□□□□ -1.94
RNU6-990P-201ENST00000364385 KRTAP3-3Q9BYR6 98 aa2.92□□□□□ -1.94
RNU6-990P-201ENST00000364385 KRTAP3-2Q9BYR7 98 aa2.92□□□□□ -1.94
RNU6-990P-201ENST00000364385 MYT1LQ9UL68 1186 aa2.92□□□□□ -1.94
RNU6-990P-201ENST00000364385 KCNA4P22459 653 aa2.91□□□□□ -1.94
RNU6-990P-201ENST00000364385 HS3ST6Q96QI5 342 aa2.91□□□□□ -1.94
RNU6-990P-201ENST00000364385 BMP2KQ9NSY1 1161 aaPredicted RBP2.91□□□□□ -1.94
RNU6-990P-201ENST00000364385 MKRN4PQ13434 485 aaPredicted RBP2.9□□□□□ -1.95
RNU6-990P-201ENST00000364385 COLQQ9Y215 455 aaPredicted RBP2.9□□□□□ -1.95
RNU6-990P-201ENST00000364385 FAM205CA6NFA0 338 aa2.89□□□□□ -1.95
RNU6-990P-201ENST00000364385 PLCG2P16885 1265 aa2.89□□□□□ -1.95
RNU6-990P-201ENST00000364385 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.89□□□□□ -1.95
RNU6-990P-201ENST00000364385 TTLL13PA6NNM8 815 aa2.85□□□□□ -1.95
RNU6-990P-201ENST00000364385 PLA2G2EQ9NZK7 142 aa2.85□□□□□ -1.95
RNU6-990P-201ENST00000364385 TRIM35Q9UPQ4 493 aa2.85□□□□□ -1.95
RNU6-990P-201ENST00000364385 KIF12Q96FN5 646 aa2.84□□□□□ -1.95
RNU6-990P-201ENST00000364385 TSPYL2Q9H2G4 693 aaPredicted RBP2.84□□□□□ -1.95
RNU6-990P-201ENST00000364385 C3orf67Q6ZVT6 689 aa2.83□□□□□ -1.96
RNU6-990P-201ENST00000364385 IRX2Q9BZI1 471 aaPredicted RBP2.83□□□□□ -1.96
RNU6-990P-201ENST00000364385 RGS20O76081 388 aa2.82□□□□□ -1.96
RNU6-990P-201ENST00000364385 CCDC61Q9Y6R9 512 aa2.82□□□□□ -1.96
RNU6-990P-201ENST00000364385 POTEB3A0JP26 581 aa2.81□□□□□ -1.96
RNU6-990P-201ENST00000364385 POTEBQ6S5H4 581 aa2.81□□□□□ -1.96
RNU6-990P-201ENST00000364385 ERBB3P21860 1342 aa2.81□□□□□ -1.96
RNU6-990P-201ENST00000364385 SGIP1Q9BQI5 828 aa2.8□□□□□ -1.96
RNU6-990P-201ENST00000364385 OCEL1Q9H607 264 aa2.8□□□□□ -1.96
RNU6-990P-201ENST00000364385 MAP3K13O43283 966 aa2.79□□□□□ -1.96
RNU6-990P-201ENST00000364385 MNX1P50219 401 aaPredicted RBP2.79□□□□□ -1.96
RNU6-990P-201ENST00000364385 ZNF710Q8N1W2 664 aa2.79□□□□□ -1.96
RNU6-990P-201ENST00000364385 HCSTQ9UBK5 93 aa2.79□□□□□ -1.96
RNU6-990P-201ENST00000364385 TRPC6Q9Y210 931 aa2.78□□□□□ -1.96
RNU6-990P-201ENST00000364385 RIMBP2O15034 1052 aa2.77□□□□□ -1.97
RNU6-990P-201ENST00000364385 IRX5P78411 483 aaPredicted RBP2.77□□□□□ -1.97
RNU6-990P-201ENST00000364385 L3MBTL3Q96JM7 780 aaPredicted RBP2.77□□□□□ -1.97
RNU6-990P-201ENST00000364385 TMEM106CQ9BVX2 250 aa2.76□□□□□ -1.97
RNU6-990P-201ENST00000364385 PCDHB13Q9Y5F0 798 aa2.76□□□□□ -1.97
RNU6-990P-201ENST00000364385 LOC100996750A0A140TA64 210 aa2.75□□□□□ -1.97
RNU6-990P-201ENST00000364385 PLEKHG5O94827 1062 aa2.75□□□□□ -1.97
RNU6-990P-201ENST00000364385 HOXB1P14653 301 aaPredicted RBP2.75□□□□□ -1.97
RNU6-990P-201ENST00000364385 DOK7Q18PE1 504 aa2.75□□□□□ -1.97
RNU6-990P-201ENST00000364385 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
RNU6-990P-201ENST00000364385 VARS2Q5ST30 1063 aaKnown RBP2.74□□□□□ -1.97
RNU6-990P-201ENST00000364385 Q6ZNB5 142 aa2.74□□□□□ -1.97
RNU6-990P-201ENST00000364385 ANKRD13DQ6ZTN6 518 aa2.74□□□□□ -1.97
RNU6-990P-201ENST00000364385 ZNF687Q8N1G0 1237 aa2.74□□□□□ -1.97
RNU6-990P-201ENST00000364385 SLC4A1APQ9BWU0 796 aaKnown RBP2.73□□□□□ -1.97
RNU6-990P-201ENST00000364385 G3V3G9 751 aa2.72□□□□□ -1.97
RNU6-990P-201ENST00000364385 DCAF8Q5TAQ9 597 aa2.72□□□□□ -1.97
RNU6-990P-201ENST00000364385 GOLGA2Q08379 1002 aa2.7□□□□□ -1.98
RNU6-990P-201ENST00000364385 LAPTM4AQ15012 233 aa2.69□□□□□ -1.98
RNU6-990P-201ENST00000364385 ZSWIM6Q9HCJ5 1215 aa2.69□□□□□ -1.98
RNU6-990P-201ENST00000364385 LSM11P83369 360 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU6-990P-201ENST00000364385 IFNL1Q8IU54 200 aa2.68□□□□□ -1.98
RNU6-990P-201ENST00000364385 HOXB3P14651 431 aaPredicted RBP2.67□□□□□ -1.98
RNU6-990P-201ENST00000364385 PBX2P40425 430 aa2.67□□□□□ -1.98
RNU6-990P-201ENST00000364385 MKRN3Q13064 507 aaKnown RBP2.67□□□□□ -1.98
RNU6-990P-201ENST00000364385 IFFO2Q5TF58 517 aa2.66□□□□□ -1.98
RNU6-990P-201ENST00000364385 RASEFQ8IZ41 740 aa2.65□□□□□ -1.99
RNU6-990P-201ENST00000364385 A0A0G2JS52 829 aa2.64□□□□□ -1.99
RNU6-990P-201ENST00000364385 SPDYE4A6NLX3 237 aa2.64□□□□□ -1.99
RNU6-990P-201ENST00000364385 PDCD7Q8N8D1 485 aaKnown RBP2.64□□□□□ -1.99
RNU6-990P-201ENST00000364385 TRAF7Q6Q0C0 670 aa2.63□□□□□ -1.99
RNU6-990P-201ENST00000364385 STAC3Q96MF2 364 aa2.63□□□□□ -1.99
RNU6-990P-201ENST00000364385 ZBTB47Q9UFB7 747 aaPredicted RBP2.63□□□□□ -1.99
RNU6-990P-201ENST00000364385 FAM212AQ96EL1 285 aa2.62□□□□□ -1.99
RNU6-990P-201ENST00000364385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.62□□□□□ -1.99
RNU6-990P-201ENST00000364385 BOLA1Q9Y3E2 137 aa2.61□□□□□ -1.99
RNU6-990P-201ENST00000364385 ZBTB22O15209 634 aa2.6□□□□□ -1.99
RNU6-990P-201ENST00000364385 ZNF787Q6DD87 383 aa2.6□□□□□ -1.99
RNU6-990P-201ENST00000364385 ZNF316A6NFI3 1004 aaPredicted RBP2.59□□□□□ -1.99
RNU6-990P-201ENST00000364385 MIER1Q8N108 512 aa2.59□□□□□ -1.99
RNU6-990P-201ENST00000364385 ADGRD1Q6QNK2 874 aa2.58□□□□□ -2
RNU6-990P-201ENST00000364385 ZNF775Q96BV0 537 aaPredicted RBP2.58□□□□□ -2
RNU6-990P-201ENST00000364385 KCTD12Q96CX2 325 aaKnown RBP2.58□□□□□ -2
RNU6-990P-201ENST00000364385 GPR153Q6NV75 609 aa2.57□□□□□ -2
RNU6-990P-201ENST00000364385 STK17AQ9UEE5 414 aa2.57□□□□□ -2
RNU6-990P-201ENST00000364385 TK2O00142 265 aa2.56□□□□□ -2
RNU6-990P-201ENST00000364385 GFRA3O60609 400 aa2.55□□□□□ -2
RNU6-990P-201ENST00000364385 XP32Q5T750 250 aa2.55□□□□□ -2
RNU6-990P-201ENST00000364385 ZNF467Q7Z7K2 595 aaPredicted RBP2.55□□□□□ -2
RNU6-990P-201ENST00000364385 PSDA5PKW4 1024 aaPredicted RBP2.54□□□□□ -2
RNU6-990P-201ENST00000364385 NRG2O14511 850 aaPredicted RBP2.54□□□□□ -2
RNU6-990P-201ENST00000364385 PTPN5P54829 565 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms